RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 SRP72O76094 671 aaKnown RBP10.9□□□□□ -0.66
CLSTN3-206ENST00000535668 ZRANB2O95218 330 aaKnown RBP eCLIP10.9□□□□□ -0.66
CLSTN3-206ENST00000535668 PRAMEF1O95521 474 aa10.9□□□□□ -0.66
CLSTN3-206ENST00000535668 IGHEP01854 428 aa10.9□□□□□ -0.66
CLSTN3-206ENST00000535668 APOC2P02655 101 aa10.9□□□□□ -0.66
CLSTN3-206ENST00000535668 KRT1P04264 644 aa10.9□□□□□ -0.66
CLSTN3-206ENST00000535668 PECAM1P16284 738 aaPredicted RBP10.9□□□□□ -0.66
CLSTN3-206ENST00000535668 COMTP21964 271 aa10.9□□□□□ -0.66
CLSTN3-206ENST00000535668 GJC1P36383 396 aa10.9□□□□□ -0.66
CLSTN3-206ENST00000535668 CHRNA4P43681 627 aa10.9□□□□□ -0.66
CLSTN3-206ENST00000535668 VAV2P52735 878 aa10.9□□□□□ -0.66
CLSTN3-206ENST00000535668 RRADP55042 308 aa10.9□□□□□ -0.66
CLSTN3-206ENST00000535668 KCNAB1Q14722 419 aa10.9□□□□□ -0.66
CLSTN3-206ENST00000535668 FAM199XQ6PEV8 388 aaPredicted RBP10.9□□□□□ -0.66
CLSTN3-206ENST00000535668 FAM198BQ6UWH4 519 aa10.9□□□□□ -0.66
CLSTN3-206ENST00000535668 FAM151BQ6UXP7 276 aa10.9□□□□□ -0.66
CLSTN3-206ENST00000535668 CERS6Q6ZMG9 384 aa10.9□□□□□ -0.66
CLSTN3-206ENST00000535668 SPOCD1Q6ZMY3 1216 aa10.9□□□□□ -0.66
CLSTN3-206ENST00000535668 RFX6Q8HWS3 928 aa10.9□□□□□ -0.66
CLSTN3-206ENST00000535668 GDAP1Q8TB36 358 aa10.9□□□□□ -0.66
CLSTN3-206ENST00000535668 SSC4DQ8WTU2 575 aa10.9□□□□□ -0.66
CLSTN3-206ENST00000535668 RNF25Q96BH1 459 aaPredicted RBP10.9□□□□□ -0.66
CLSTN3-206ENST00000535668 ULK4Q96C45 1275 aa10.9□□□□□ -0.66
CLSTN3-206ENST00000535668 CCDC42Q96M95 316 aa10.9□□□□□ -0.66
CLSTN3-206ENST00000535668 RUFY1Q96T51 708 aa10.9□□□□□ -0.66
CLSTN3-206ENST00000535668 GBA3Q9H227 469 aa10.9□□□□□ -0.66
CLSTN3-206ENST00000535668 CHST8Q9H2A9 424 aa10.9□□□□□ -0.66
CLSTN3-206ENST00000535668 MVB12BQ9H7P6 319 aa10.9□□□□□ -0.66
CLSTN3-206ENST00000535668 NHEJ1Q9H9Q4 299 aaPredicted RBP10.9□□□□□ -0.66
CLSTN3-206ENST00000535668 LRRC4CQ9HCJ2 640 aa10.9□□□□□ -0.66
CLSTN3-206ENST00000535668 ACSS2Q9NR19 701 aa10.9□□□□□ -0.66
CLSTN3-206ENST00000535668 ZNHIT6Q9NWK9 470 aaKnown RBP10.9□□□□□ -0.66
CLSTN3-206ENST00000535668 SAE1Q9UBE0 346 aaPredicted RBP10.9□□□□□ -0.66
CLSTN3-206ENST00000535668 AAR2Q9Y312 384 aaKnown RBP10.9□□□□□ -0.66
CLSTN3-206ENST00000535668 ALG6Q9Y672 507 aa10.9□□□□□ -0.66
CLSTN3-206ENST00000535668 TNRC6AQ8NDV7 1962 aaKnown RBP10.9□□□□□ -0.66
CLSTN3-206ENST00000535668 PIKFYVEQ9Y2I7 2098 aa10.89□□□□□ -0.67
CLSTN3-206ENST00000535668 OR2AG2A6NM03 316 aa10.89□□□□□ -0.67
CLSTN3-206ENST00000535668 STX7O15400 261 aaKnown RBP10.89□□□□□ -0.67
CLSTN3-206ENST00000535668 TMEM63AO94886 807 aa10.89□□□□□ -0.67
CLSTN3-206ENST00000535668 SLC35G4P0C7Q5 338 aa10.89□□□□□ -0.67
CLSTN3-206ENST00000535668 MSH3P20585 1137 aa10.89□□□□□ -0.67
CLSTN3-206ENST00000535668 PRDX3P30048 256 aaKnown RBP10.89□□□□□ -0.67
CLSTN3-206ENST00000535668 PTGIRP43119 386 aa10.89□□□□□ -0.67
CLSTN3-206ENST00000535668 TNNT3P45378 269 aaPredicted RBP10.89□□□□□ -0.67
CLSTN3-206ENST00000535668 GCGRP47871 477 aa10.89□□□□□ -0.67
CLSTN3-206ENST00000535668 GABRA4P48169 554 aa10.89□□□□□ -0.67
CLSTN3-206ENST00000535668 ZNF140P52738 457 aaPredicted RBP10.89□□□□□ -0.67
CLSTN3-206ENST00000535668 GEMP55040 296 aa10.89□□□□□ -0.67
CLSTN3-206ENST00000535668 ABRQ12979 859 aa10.89□□□□□ -0.67
CLSTN3-206ENST00000535668 NCF4Q15080 339 aa10.89□□□□□ -0.67
CLSTN3-206ENST00000535668 INPP5JQ15735 1006 aaPredicted RBP10.89□□□□□ -0.67
CLSTN3-206ENST00000535668 C4orf17Q53FE4 359 aa10.89□□□□□ -0.67
CLSTN3-206ENST00000535668 FNBP1LQ5T0N5 605 aa10.89□□□□□ -0.67
CLSTN3-206ENST00000535668 DENND5AQ6IQ26 1287 aa10.89□□□□□ -0.67
CLSTN3-206ENST00000535668 C11orf63Q6NUN7 778 aa10.89□□□□□ -0.67
CLSTN3-206ENST00000535668 PID1Q7Z2X4 250 aa10.89□□□□□ -0.67
CLSTN3-206ENST00000535668 SNX20Q7Z614 316 aa10.89□□□□□ -0.67
CLSTN3-206ENST00000535668 TMEM126BQ8IUX1 230 aa10.89□□□□□ -0.67
CLSTN3-206ENST00000535668 VSTM4Q8IW00 320 aa10.89□□□□□ -0.67
CLSTN3-206ENST00000535668 NXPE1Q8N323 547 aa10.89□□□□□ -0.67
CLSTN3-206ENST00000535668 ZBTB2Q8N680 514 aa10.89□□□□□ -0.67
CLSTN3-206ENST00000535668 EFCAB3Q8N7B9 438 aa10.89□□□□□ -0.67
CLSTN3-206ENST00000535668 SPDYE1Q8NFV5 336 aaPredicted RBP10.89□□□□□ -0.67
CLSTN3-206ENST00000535668 RMDN2Q96LZ7 410 aa10.89□□□□□ -0.67
CLSTN3-206ENST00000535668 C12orf66Q96MD2 445 aa10.89□□□□□ -0.67
CLSTN3-206ENST00000535668 CHP1Q99653 195 aa10.89□□□□□ -0.67
CLSTN3-206ENST00000535668 WWP1Q9H0M0 922 aa10.89□□□□□ -0.67
CLSTN3-206ENST00000535668 FANCEQ9HB96 536 aa10.89□□□□□ -0.67
CLSTN3-206ENST00000535668 IMP3Q9NV31 184 aaKnown RBP10.89□□□□□ -0.67
CLSTN3-206ENST00000535668 UBP1Q9NZI7 540 aa10.89□□□□□ -0.67
CLSTN3-206ENST00000535668 AP1M2Q9Y6Q5 423 aa10.89□□□□□ -0.67
CLSTN3-206ENST00000535668 PCM1Q15154 2024 aa10.89□□□□□ -0.67
CLSTN3-206ENST00000535668 DIDO1Q9BTC0 2240 aaKnown RBP10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 OR6C74A6NCV1 312 aa10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 GOLGA6L19H0YKK7 550 aa10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 GPR39O43194 453 aa10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 MFAP3LO75121 409 aa10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 AP2A2O94973 939 aa10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 CRTAMO95727 393 aa10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 RALBP11234 206 aa10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 ATP1B2P14415 290 aaPredicted RBP10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 GNLYP22749 145 aa10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 UQCRFS1P47985 274 aa10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 ARL4DP49703 201 aa10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 ITGA1P56199 1179 aa10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 PLOD1Q02809 727 aaPredicted RBP10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 PRKAA1Q13131 559 aa10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 BOP1Q14137 746 aaKnown RBP10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 SSPNQ14714 243 aa10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 NOMO1Q15155 1222 aa10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 GPR19Q15760 415 aa10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 NADK2Q4G0N4 442 aa10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 VWA5B1Q5TIE3 1220 aa10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 CPZQ66K79 652 aa10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 ITPRIPL1Q6GPH6 555 aa10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 LCN10Q6JVE6 187 aa10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 RHBDD2Q6NTF9 364 aa10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 SYTL1Q8IYJ3 562 aa10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 ADGRF3Q8IZF5 1079 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms