RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 TSPAN1O60635 241 aa4.4□□□□□ -1.71
C11orf88-204ENST00000529661 WISP2O76076 250 aa4.4□□□□□ -1.71
C11orf88-204ENST00000529661 F7P08709 466 aaPredicted RBP4.4□□□□□ -1.71
C11orf88-204ENST00000529661 CCR10P46092 362 aa4.4□□□□□ -1.71
C11orf88-204ENST00000529661 SNRPEP62304 92 aaKnown RBP4.4□□□□□ -1.71
C11orf88-204ENST00000529661 RBP5P82980 135 aa4.4□□□□□ -1.71
C11orf88-204ENST00000529661 RBPJQ06330 500 aa4.4□□□□□ -1.71
C11orf88-204ENST00000529661 PPIGQ13427 754 aaKnown RBP eCLIP4.4□□□□□ -1.71
C11orf88-204ENST00000529661 TNIP1Q15025 636 aa4.4□□□□□ -1.71
C11orf88-204ENST00000529661 RNASEH2BQ5TBB1 312 aaKnown RBP4.4□□□□□ -1.71
C11orf88-204ENST00000529661 ALS2CLQ60I27 953 aa4.4□□□□□ -1.71
C11orf88-204ENST00000529661 TRNP1Q6NT89 227 aa4.4□□□□□ -1.71
C11orf88-204ENST00000529661 TRAT1Q6PIZ9 186 aa4.4□□□□□ -1.71
C11orf88-204ENST00000529661 UNQ6126/PRO20091Q6UXV3 157 aa4.4□□□□□ -1.71
C11orf88-204ENST00000529661 TMEM173Q86WV6 379 aaPredicted RBP4.4□□□□□ -1.71
C11orf88-204ENST00000529661 METTL23Q86XA0 190 aa4.4□□□□□ -1.71
C11orf88-204ENST00000529661 RNF113BQ8IZP6 322 aaKnown RBP4.4□□□□□ -1.71
C11orf88-204ENST00000529661 C1orf87Q8N0U7 546 aa4.4□□□□□ -1.71
C11orf88-204ENST00000529661 OR8H3Q8N146 312 aa4.4□□□□□ -1.71
C11orf88-204ENST00000529661 AFAP1Q8N556 730 aa4.4□□□□□ -1.71
C11orf88-204ENST00000529661 RFLNBQ8N5W9 214 aa4.4□□□□□ -1.71
C11orf88-204ENST00000529661 CAMKVQ8NCB2 501 aa4.4□□□□□ -1.71
C11orf88-204ENST00000529661 BBS10Q8TAM1 723 aa4.4□□□□□ -1.71
C11orf88-204ENST00000529661 DEPDC1BQ8WUY9 529 aa4.4□□□□□ -1.71
C11orf88-204ENST00000529661 NXNL1Q96CM4 212 aa4.4□□□□□ -1.71
C11orf88-204ENST00000529661 MS4A10Q96PG2 267 aa4.4□□□□□ -1.71
C11orf88-204ENST00000529661 FAM129AQ9BZQ8 928 aa4.4□□□□□ -1.71
C11orf88-204ENST00000529661 WNT5BQ9H1J7 359 aa4.4□□□□□ -1.71
C11orf88-204ENST00000529661 TCF7L2Q9NQB0 619 aa4.4□□□□□ -1.71
C11orf88-204ENST00000529661 MBNL1Q9NR56 388 aaKnown RBP4.4□□□□□ -1.71
C11orf88-204ENST00000529661 ARGLU1Q9NWB6 273 aaPredicted RBP4.4□□□□□ -1.71
C11orf88-204ENST00000529661 SMARCAL1Q9NZC9 954 aa4.4□□□□□ -1.71
C11orf88-204ENST00000529661 KCNS2Q9ULS6 477 aa4.4□□□□□ -1.71
C11orf88-204ENST00000529661 LIPGQ9Y5X9 500 aa4.4□□□□□ -1.71
C11orf88-204ENST00000529661 CKAP5Q14008 2032 aa4.39□□□□□ -1.71
C11orf88-204ENST00000529661 IGHV4OR15-8A0A075B7B6 117 aa4.39□□□□□ -1.71
C11orf88-204ENST00000529661 FEZF1A0PJY2 475 aa4.39□□□□□ -1.71
C11orf88-204ENST00000529661 PI4K2BG5E9Z4 385 aa4.39□□□□□ -1.71
C11orf88-204ENST00000529661 TULP2O00295 520 aa4.39□□□□□ -1.71
C11orf88-204ENST00000529661 DVL1O14640 695 aa4.39□□□□□ -1.71
C11orf88-204ENST00000529661 GRID2O43424 1007 aa4.39□□□□□ -1.71
C11orf88-204ENST00000529661 DIAPH2O60879 1101 aa4.39□□□□□ -1.71
C11orf88-204ENST00000529661 MED24O75448 989 aa4.39□□□□□ -1.71
C11orf88-204ENST00000529661 OR52Z1P0C646 297 aa4.39□□□□□ -1.71
C11orf88-204ENST00000529661 FDPSP14324 419 aaKnown RBP4.39□□□□□ -1.71
C11orf88-204ENST00000529661 MT3P25713 68 aa4.39□□□□□ -1.71
C11orf88-204ENST00000529661 HOXC13P31276 330 aa4.39□□□□□ -1.71
C11orf88-204ENST00000529661 PCGF2P35227 344 aa4.39□□□□□ -1.71
C11orf88-204ENST00000529661 CD81P60033 236 aa4.39□□□□□ -1.71
C11orf88-204ENST00000529661 KRTAP10-7P60409 375 aaPredicted RBP4.39□□□□□ -1.71
C11orf88-204ENST00000529661 RUNX1T1Q06455 604 aa4.39□□□□□ -1.71
C11orf88-204ENST00000529661 TROAPQ12815 778 aa4.39□□□□□ -1.71
C11orf88-204ENST00000529661 VWC2Q2TAL6 325 aa4.39□□□□□ -1.71
C11orf88-204ENST00000529661 KLHL26Q53HC5 615 aa4.39□□□□□ -1.71
C11orf88-204ENST00000529661 PLA2G4FQ68DD2 849 aa4.39□□□□□ -1.71
C11orf88-204ENST00000529661 CCNI2Q6ZMN8 369 aaPredicted RBP4.39□□□□□ -1.71
C11orf88-204ENST00000529661 CENPVQ7Z7K6 275 aaPredicted RBP4.39□□□□□ -1.71
C11orf88-204ENST00000529661 ZNF329Q86UD4 541 aa4.39□□□□□ -1.71
C11orf88-204ENST00000529661 EXOC3L1Q86VI1 746 aa4.39□□□□□ -1.71
C11orf88-204ENST00000529661 SFR1Q86XK3 245 aa4.39□□□□□ -1.71
C11orf88-204ENST00000529661 ZNF441Q8N8Z8 693 aa4.39□□□□□ -1.71
C11orf88-204ENST00000529661 ATL1Q8WXF7 558 aa4.39□□□□□ -1.71
C11orf88-204ENST00000529661 SORCS1Q8WY21 1168 aa4.39□□□□□ -1.71
C11orf88-204ENST00000529661 FAM81BQ96LP2 452 aa4.39□□□□□ -1.71
C11orf88-204ENST00000529661 GRPEL1Q9HAV7 217 aa4.39□□□□□ -1.71
C11orf88-204ENST00000529661 HHATLQ9HCP6 504 aa4.39□□□□□ -1.71
C11orf88-204ENST00000529661 TCP11L1Q9NUJ3 509 aa4.39□□□□□ -1.71
C11orf88-204ENST00000529661 VDAC3Q9Y277 283 aa4.39□□□□□ -1.71
C11orf88-204ENST00000529661 YIPF1Q9Y548 306 aa4.39□□□□□ -1.71
C11orf88-204ENST00000529661 A0A0G2JPF8 293 aa4.38□□□□□ -1.71
C11orf88-204ENST00000529661 ANKUB1A6NFN9 424 aa4.38□□□□□ -1.71
C11orf88-204ENST00000529661 TMEM221A6NGB7 291 aa4.38□□□□□ -1.71
C11orf88-204ENST00000529661 HNRNPCL3B7ZW38 293 aa4.38□□□□□ -1.71
C11orf88-204ENST00000529661 CCDC188H7C350 402 aa4.38□□□□□ -1.71
C11orf88-204ENST00000529661 PTGESO14684 152 aa4.38□□□□□ -1.71
C11orf88-204ENST00000529661 WDR46O15213 610 aaKnown RBP4.38□□□□□ -1.71
C11orf88-204ENST00000529661 LINC01565O15544 149 aa4.38□□□□□ -1.71
C11orf88-204ENST00000529661 XRCC3O43542 346 aa4.38□□□□□ -1.71
C11orf88-204ENST00000529661 KRT36O76013 467 aa4.38□□□□□ -1.71
C11orf88-204ENST00000529661 HSP90AB1P08238 724 aaKnown RBP4.38□□□□□ -1.71
C11orf88-204ENST00000529661 LINC00271P0C7V0 271 aa4.38□□□□□ -1.71
C11orf88-204ENST00000529661 HNRNPCL4P0DMR1 293 aa4.38□□□□□ -1.71
C11orf88-204ENST00000529661 VDRP11473 427 aa4.38□□□□□ -1.71
C11orf88-204ENST00000529661 AMD1P17707 334 aa4.38□□□□□ -1.71
C11orf88-204ENST00000529661 ZNF75DP51815 510 aa4.38□□□□□ -1.71
C11orf88-204ENST00000529661 HNRNPKP61978 463 aaKnown RBP eCLIP4.38□□□□□ -1.71
C11orf88-204ENST00000529661 COG7P83436 770 aa4.38□□□□□ -1.71
C11orf88-204ENST00000529661 HSPB3Q12988 150 aa4.38□□□□□ -1.71
C11orf88-204ENST00000529661 ZBTB17Q13105 803 aa4.38□□□□□ -1.71
C11orf88-204ENST00000529661 TUBA1AQ71U36 451 aa4.38□□□□□ -1.71
C11orf88-204ENST00000529661 ADCK2Q7Z695 626 aa4.38□□□□□ -1.71
C11orf88-204ENST00000529661 DNAJB7Q7Z6W7 309 aaPredicted RBP4.38□□□□□ -1.71
C11orf88-204ENST00000529661 TMPRSS12Q86WS5 348 aa4.38□□□□□ -1.71
C11orf88-204ENST00000529661 NAGSQ8N159 534 aa4.38□□□□□ -1.71
C11orf88-204ENST00000529661 TTC30BQ8N4P2 665 aa4.38□□□□□ -1.71
C11orf88-204ENST00000529661 C1orf52Q8N6N3 182 aaKnown RBP4.38□□□□□ -1.71
C11orf88-204ENST00000529661 OR2AJ1Q8NGZ0 328 aa4.38□□□□□ -1.71
C11orf88-204ENST00000529661 MOSPD2Q8NHP6 518 aa4.38□□□□□ -1.71
C11orf88-204ENST00000529661 SLC20A1Q8WUM9 679 aa4.38□□□□□ -1.71
C11orf88-204ENST00000529661 FIG4Q92562 907 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms