RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	ZNF577	Q9BSK1	485 aa		5.12	□□□□□ -1.59
PABPC1-223	ENST00000523636	CAPS2	Q9BXY5	557 aa		5.12	□□□□□ -1.59
PABPC1-223	ENST00000523636	ACE2	Q9BYF1	805 aa	Predicted RBP	5.12	□□□□□ -1.59
PABPC1-223	ENST00000523636	REXO4	Q9GZR2	422 aa	Known RBP	5.12	□□□□□ -1.59
PABPC1-223	ENST00000523636	BRD8	Q9H0E9	1235 aa		5.12	□□□□□ -1.59
PABPC1-223	ENST00000523636	MRPL46	Q9H2W6	279 aa	Known RBP	5.12	□□□□□ -1.59
PABPC1-223	ENST00000523636	PDZD7	Q9H5P4	517 aa		5.12	□□□□□ -1.59
PABPC1-223	ENST00000523636	SAYSD1	Q9NPB0	183 aa		5.12	□□□□□ -1.59
PABPC1-223	ENST00000523636	XPNPEP1	Q9NQW7	623 aa		5.12	□□□□□ -1.59
PABPC1-223	ENST00000523636	SERINC1	Q9NRX5	453 aa		5.12	□□□□□ -1.59
PABPC1-223	ENST00000523636	NINJ2	Q9NZG7	142 aa		5.12	□□□□□ -1.59
PABPC1-223	ENST00000523636	FOXJ2	Q9P0K8	574 aa		5.12	□□□□□ -1.59
PABPC1-223	ENST00000523636	TBC1D7	Q9P0N9	293 aa		5.12	□□□□□ -1.59
PABPC1-223	ENST00000523636	WRAP73	Q9P2S5	460 aa	Predicted RBP	5.12	□□□□□ -1.59
PABPC1-223	ENST00000523636	ANAPC5	Q9UJX4	755 aa		5.12	□□□□□ -1.59
PABPC1-223	ENST00000523636	CDC42EP3	Q9UKI2	254 aa		5.12	□□□□□ -1.59
PABPC1-223	ENST00000523636	RIMKLB	Q9ULI2	386 aa		5.12	□□□□□ -1.59
PABPC1-223	ENST00000523636	AURKC	Q9UQB9	309 aa		5.12	□□□□□ -1.59
PABPC1-223	ENST00000523636	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	5.12	□□□□□ -1.59	2e-33	■■■■■ 31.7
PABPC1-223	ENST00000523636	FAM169A	Q9Y6X4	670 aa		5.12	□□□□□ -1.59
PABPC1-223	ENST00000523636	MDC1	Q14676	2089 aa	Known RBP	5.12	□□□□□ -1.59
PABPC1-223	ENST00000523636	CACNA1C	Q13936	2221 aa		5.12	□□□□□ -1.59
PABPC1-223	ENST00000523636	UQCRHL	A0A096LP55	91 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	HEATR9	A2RTY3	570 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	MROH6	A6NGR9	719 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	DBX1	A6NMT0	343 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	MAGEB3	O15480	346 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	EXOC3	O60645	756 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	SDC3	O75056	442 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	PHF2	O75151	1096 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	PEX11A	O75192	247 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	TULP3	O75386	442 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	SORBS2	O94875	1100 aa	Known RBP	5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	UQCRH	P07919	91 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	PDGFRA	P16234	1089 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	IL10	P22301	178 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	ARL3	P36405	182 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	BUD31	P41223	144 aa	Predicted RBP	5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	ME1	P48163	572 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	DIO1	P49895	249 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	ADCY7	P51828	1080 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	GTF2A1	P52655	376 aa	Predicted RBP	5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	PRKAA2	P54646	552 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	ACTR1A	P61163	376 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	RAB1A	P62820	205 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	ATP2C1	P98194	919 aa	Predicted RBP	5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	ACY1	Q03154	408 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	RUNX1T1	Q06455	604 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	MALL	Q13021	153 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	CAMK2D	Q13557	499 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	CAPS	Q13938	189 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	STK38	Q15208	465 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	ZNF124	Q15973	351 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	ADRM1	Q16186	407 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	CNGA3	Q16281	694 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	INA	Q16352	499 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	CAMK4	Q16566	473 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	STX1A	Q16623	288 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	ZNF805	Q5CZA5	627 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	XKR3	Q5GH77	459 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	TOR1AIP1	Q5JTV8	583 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	AADACL4	Q5VUY2	407 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	TMEM198	Q66K66	360 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	DRICH1	Q6PGQ1	229 aa	Predicted RBP	5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	OLFML1	Q6UWY5	402 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	ALKAL1	Q6UXT8	129 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	ZYG11A	Q6WRX3	759 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	TRMT11	Q7Z4G4	463 aa	Known RBP	5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	CPLX4	Q7Z7G2	160 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	CACUL1	Q86Y37	369 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	TGIF2LY	Q8IUE0	185 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	CCDC65	Q8IXS2	484 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	HACE1	Q8IYU2	909 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	ADGRF2	Q8IZF7	708 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	SCML4	Q8N228	414 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	C17orf53	Q8N3J3	647 aa	Predicted RBP	5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	AADAT	Q8N5Z0	425 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	DPP10	Q8N608	796 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	FAM71D	Q8N9W8	422 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	FANCB	Q8NB91	859 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	BBOF1	Q8ND07	529 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	OR56B2P	Q8NGI1	322 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	OR52K1	Q8NGK4	314 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	OR10T2	Q8NGX3	314 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	AGR3	Q8TD06	166 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	PSPC1	Q8WXF1	523 aa	Known RBP	5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	THAP4	Q8WY91	577 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	SGCD	Q92629	289 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	RNF125	Q96EQ8	232 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	C8orf76	Q96K31	380 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	C5orf34	Q96MH7	638 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	TWNK	Q96RR1	684 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	RANBP9	Q96S59	729 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	MMTAG2	Q9BU76	263 aa	Known RBP	5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	THUMPD3	Q9BV44	507 aa	Known RBP	5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	NUP58	Q9BVL2	599 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	SPZ1	Q9BXG8	430 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	B3GNT4	Q9C0J1	378 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	PCED1A	Q9H1Q7	454 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	EHD1	Q9H4M9	534 aa		5.11	□□□□□ -1.59

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