RNA–Protein interactions for RNA: ENST00000521545.6

LAPTM4B-203, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4B, Length 915 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-203ENST00000521545 TUBD1Q9UJT1 453 aa25.28■■□□□ 1.64
LAPTM4B-203ENST00000521545 KCND3Q9UK17 655 aa25.28■■□□□ 1.64
LAPTM4B-203ENST00000521545 CROTQ9UKG9 612 aa25.28■■□□□ 1.64
LAPTM4B-203ENST00000521545 CAPN6Q9Y6Q1 641 aa25.28■■□□□ 1.64
LAPTM4B-203ENST00000521545 IGLV3-16A0A075B6K0 115 aa25.27■■□□□ 1.64
LAPTM4B-203ENST00000521545 TRBV5-4A0A0C4DH59 114 aa25.27■■□□□ 1.64
LAPTM4B-203ENST00000521545 GOLGA6L3A6NEY3 463 aa25.27■■□□□ 1.64
LAPTM4B-203ENST00000521545 IFRD1O00458 451 aaPredicted RBP25.27■■□□□ 1.64
LAPTM4B-203ENST00000521545 GAS8O95995 478 aa25.27■■□□□ 1.64
LAPTM4B-203ENST00000521545 CACNG1Q06432 222 aa25.27■■□□□ 1.64
LAPTM4B-203ENST00000521545 PRKAA1Q13131 559 aa25.27■■□□□ 1.64
LAPTM4B-203ENST00000521545 KCNAB1Q14722 419 aa25.27■■□□□ 1.64
LAPTM4B-203ENST00000521545 DEFB109BQ30KR1 87 aa25.27■■□□□ 1.64
LAPTM4B-203ENST00000521545 FERD3LQ96RJ6 166 aa25.27■■□□□ 1.64
LAPTM4B-203ENST00000521545 FRMD8P1Q9BZ68 369 aaPredicted RBP25.27■■□□□ 1.64
LAPTM4B-203ENST00000521545 COG4Q9H9E3 785 aa25.27■■□□□ 1.64
LAPTM4B-203ENST00000521545 FGF21Q9NSA1 209 aa25.27■■□□□ 1.64
LAPTM4B-203ENST00000521545 PIH1D1Q9NWS0 290 aaKnown RBP25.27■■□□□ 1.64
LAPTM4B-203ENST00000521545 BOD1L1Q8NFC6 3051 aa25.26■■□□□ 1.63
LAPTM4B-203ENST00000521545 KATNA1O75449 491 aa25.26■■□□□ 1.63
LAPTM4B-203ENST00000521545 ZBTB11O95625 1053 aaPredicted RBP25.26■■□□□ 1.63
LAPTM4B-203ENST00000521545 EBLN1P0CF75 366 aa25.26■■□□□ 1.63
LAPTM4B-203ENST00000521545 OAS2P29728 719 aaKnown RBP25.26■■□□□ 1.63
LAPTM4B-203ENST00000521545 NFKB2Q00653 900 aa25.26■■□□□ 1.63
LAPTM4B-203ENST00000521545 SKIDA1Q1XH10 827 aa25.26■■□□□ 1.63
LAPTM4B-203ENST00000521545 TMTC4Q5T4D3 741 aa25.26■■□□□ 1.63
LAPTM4B-203ENST00000521545 ATG14Q6ZNE5 492 aa25.26■■□□□ 1.63
LAPTM4B-203ENST00000521545 CARFQ8N187 725 aa25.26■■□□□ 1.63
LAPTM4B-203ENST00000521545 DNAAF3Q8N9W5 541 aa25.26■■□□□ 1.63
LAPTM4B-203ENST00000521545 ACVR1CQ8NER5 493 aa25.26■■□□□ 1.63
LAPTM4B-203ENST00000521545 OR4E2Q8NGC2 313 aa25.26■■□□□ 1.63
LAPTM4B-203ENST00000521545 APOBEC4Q8WW27 367 aaKnown RBP25.26■■□□□ 1.63
LAPTM4B-203ENST00000521545 LCN9Q8WX39 176 aa25.26■■□□□ 1.63
LAPTM4B-203ENST00000521545 MRPS18BQ9Y676 258 aaKnown RBP25.26■■□□□ 1.63
LAPTM4B-203ENST00000521545 ERI2A8K979 691 aaKnown RBP25.25■■□□□ 1.63
LAPTM4B-203ENST00000521545 KRT86O43790 486 aa25.25■■□□□ 1.63
LAPTM4B-203ENST00000521545 GSTM1P09488 218 aa25.25■■□□□ 1.63
LAPTM4B-203ENST00000521545 POLR2CP19387 275 aaPredicted RBP25.25■■□□□ 1.63
LAPTM4B-203ENST00000521545 F8A1P23610 371 aa25.25■■□□□ 1.63
LAPTM4B-203ENST00000521545 ARCN1P48444 511 aaKnown RBP25.25■■□□□ 1.63
LAPTM4B-203ENST00000521545 LMAN1P49257 510 aa25.25■■□□□ 1.63
LAPTM4B-203ENST00000521545 GSTM4Q03013 218 aa25.25■■□□□ 1.63
LAPTM4B-203ENST00000521545 PWWP2BQ6NUJ5 590 aa25.25■■□□□ 1.63
LAPTM4B-203ENST00000521545 D2HGDHQ8N465 521 aa25.25■■□□□ 1.63
LAPTM4B-203ENST00000521545 ATG4AQ8WYN0 398 aa25.25■■□□□ 1.63
LAPTM4B-203ENST00000521545 SRMSQ9H3Y6 488 aa25.25■■□□□ 1.63
LAPTM4B-203ENST00000521545 SMARCAL1Q9NZC9 954 aa25.25■■□□□ 1.63
LAPTM4B-203ENST00000521545 GUCA1BQ9UMX6 200 aa25.25■■□□□ 1.63
LAPTM4B-203ENST00000521545 MATN2O00339 956 aa25.24■■□□□ 1.63
LAPTM4B-203ENST00000521545 AP2A2O94973 939 aa25.24■■□□□ 1.63
LAPTM4B-203ENST00000521545 PRSS56P0CW18 603 aa25.24■■□□□ 1.63
LAPTM4B-203ENST00000521545 CD151P48509 253 aa25.24■■□□□ 1.63
LAPTM4B-203ENST00000521545 RPA4Q13156 261 aa25.24■■□□□ 1.63
LAPTM4B-203ENST00000521545 CERS6Q6ZMG9 384 aa25.24■■□□□ 1.63
LAPTM4B-203ENST00000521545 CLDN19Q8N6F1 224 aa25.24■■□□□ 1.63
LAPTM4B-203ENST00000521545 OR52A5Q9H2C5 316 aa25.24■■□□□ 1.63
LAPTM4B-203ENST00000521545 LHX9Q9NQ69 397 aa25.24■■□□□ 1.63
LAPTM4B-203ENST00000521545 SOHLH2Q9NX45 425 aa25.24■■□□□ 1.63
LAPTM4B-203ENST00000521545 ZNF148Q9UQR1 794 aa25.24■■□□□ 1.63
LAPTM4B-203ENST00000521545 TLN1Q9Y490 2541 aaKnown RBP25.23■■□□□ 1.63
LAPTM4B-203ENST00000521545 CCDC78A2IDD5 438 aa25.23■■□□□ 1.63
LAPTM4B-203ENST00000521545 MROH6A6NGR9 719 aa25.23■■□□□ 1.63
LAPTM4B-203ENST00000521545 SUV39H1O43463 412 aa25.23■■□□□ 1.63
LAPTM4B-203ENST00000521545 LIASO43766 372 aa25.23■■□□□ 1.63
LAPTM4B-203ENST00000521545 TIAF1O95411 115 aa25.23■■□□□ 1.63
LAPTM4B-203ENST00000521545 IFNB1P01574 187 aa25.23■■□□□ 1.63
LAPTM4B-203ENST00000521545 FDFT1P37268 417 aa25.23■■□□□ 1.63
LAPTM4B-203ENST00000521545 KPNA2P52292 529 aaKnown RBP25.23■■□□□ 1.63
LAPTM4B-203ENST00000521545 TUBB4BP68371 445 aa25.23■■□□□ 1.63
LAPTM4B-203ENST00000521545 CDH17Q12864 832 aa25.23■■□□□ 1.63
LAPTM4B-203ENST00000521545 LAMB3Q13751 1172 aa25.23■■□□□ 1.63
LAPTM4B-203ENST00000521545 TUBB2AQ13885 445 aa25.23■■□□□ 1.63
LAPTM4B-203ENST00000521545 DBN1Q16643 649 aa25.23■■□□□ 1.63
LAPTM4B-203ENST00000521545 PPP1R21Q6ZMI0 780 aa25.23■■□□□ 1.63
LAPTM4B-203ENST00000521545 PIANPQ8IYJ0 282 aa25.23■■□□□ 1.63
LAPTM4B-203ENST00000521545 OR52K1Q8NGK4 314 aa25.23■■□□□ 1.63
LAPTM4B-203ENST00000521545 OR8K5Q8NH50 307 aa25.23■■□□□ 1.63
LAPTM4B-203ENST00000521545 TBRG4Q969Z0 631 aaKnown RBP eCLIP25.23■■□□□ 1.63
LAPTM4B-203ENST00000521545 TUBB2BQ9BVA1 445 aa25.23■■□□□ 1.63
LAPTM4B-203ENST00000521545 MVB12BQ9H7P6 319 aa25.23■■□□□ 1.63
LAPTM4B-203ENST00000521545 KCND1Q9NSA2 647 aa25.23■■□□□ 1.63
LAPTM4B-203ENST00000521545 SPTA1P02549 2419 aa25.23■■□□□ 1.63
LAPTM4B-203ENST00000521545 E7EVH7 732 aa25.22■■□□□ 1.63
LAPTM4B-203ENST00000521545 PYCARD-AS1I3L0S3 204 aa25.22■■□□□ 1.63
LAPTM4B-203ENST00000521545 QSOX1O00391 747 aa25.22■■□□□ 1.63
LAPTM4B-203ENST00000521545 NTRK1P04629 796 aa25.22■■□□□ 1.63
LAPTM4B-203ENST00000521545 CDH3P22223 829 aa25.22■■□□□ 1.63
LAPTM4B-203ENST00000521545 MSNP26038 577 aaKnown RBP25.22■■□□□ 1.63
LAPTM4B-203ENST00000521545 NSG1P42857 185 aa25.22■■□□□ 1.63
LAPTM4B-203ENST00000521545 KCNC4Q03721 635 aa25.22■■□□□ 1.63
LAPTM4B-203ENST00000521545 DNASE1L3Q13609 305 aa25.22■■□□□ 1.63
LAPTM4B-203ENST00000521545 ERV3-1Q14264 604 aa25.22■■□□□ 1.63
LAPTM4B-203ENST00000521545 ATP1A1-AS1Q5TC04 95 aa25.22■■□□□ 1.63
LAPTM4B-203ENST00000521545 PHC3Q8NDX5 983 aa25.22■■□□□ 1.63
LAPTM4B-203ENST00000521545 ETNK1Q9HBU6 452 aa25.22■■□□□ 1.63
LAPTM4B-203ENST00000521545 C1GALT1Q9NS00 363 aa25.22■■□□□ 1.63
LAPTM4B-203ENST00000521545 GSAPA4D1B5 854 aa25.21■■□□□ 1.63
LAPTM4B-203ENST00000521545 C21orf140B9A014 251 aa25.21■■□□□ 1.63
LAPTM4B-203ENST00000521545 TERTO14746 1132 aaKnown RBP25.21■■□□□ 1.63
LAPTM4B-203ENST00000521545 MAP3K7O43318 606 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms