RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 ABCG1P45844 678 aa20.14■□□□□ 0.81
TRIM35-203ENST00000521253 CD151P48509 253 aa20.14■□□□□ 0.81
TRIM35-203ENST00000521253 BRD3Q15059 726 aa20.14■□□□□ 0.81
TRIM35-203ENST00000521253 COL28A1Q2UY09 1125 aa20.14■□□□□ 0.81
TRIM35-203ENST00000521253 KIAA0930Q6ICG6 404 aaPredicted RBP20.14■□□□□ 0.81
TRIM35-203ENST00000521253 ZNF449Q6P9G9 518 aa20.14■□□□□ 0.81
TRIM35-203ENST00000521253 FAM129CQ86XR2 697 aa20.14■□□□□ 0.81
TRIM35-203ENST00000521253 AGGF1Q8N302 714 aaeCLIP20.14■□□□□ 0.81
TRIM35-203ENST00000521253 OTUD6BQ8N6M0 293 aa20.14■□□□□ 0.81
TRIM35-203ENST00000521253 BMPERQ8N8U9 685 aa20.14■□□□□ 0.81
TRIM35-203ENST00000521253 PMEPA1Q969W9 287 aa20.14■□□□□ 0.81
TRIM35-203ENST00000521253 FOXJ2Q9P0K8 574 aa20.14■□□□□ 0.81
TRIM35-203ENST00000521253 EPHA6Q9UF33 1036 aa20.14■□□□□ 0.81
TRIM35-203ENST00000521253 ACSL6Q9UKU0 697 aa20.14■□□□□ 0.81
TRIM35-203ENST00000521253 COLEC10Q9Y6Z7 277 aa20.14■□□□□ 0.81
TRIM35-203ENST00000521253 AHCTF1Q8WYP5 2266 aa20.14■□□□□ 0.81
TRIM35-203ENST00000521253 B4E171 279 aa20.13■□□□□ 0.81
TRIM35-203ENST00000521253 F8W8V4 182 aa20.13■□□□□ 0.81
TRIM35-203ENST00000521253 DNALI1O14645 258 aaPredicted RBP20.13■□□□□ 0.81
TRIM35-203ENST00000521253 PRMT5O14744 637 aaPredicted RBP20.13■□□□□ 0.81
TRIM35-203ENST00000521253 KIF1CO43896 1103 aaKnown RBP20.13■□□□□ 0.81
TRIM35-203ENST00000521253 ANKRD34CP0C6C1 535 aa20.13■□□□□ 0.81
TRIM35-203ENST00000521253 ITGB6P18564 788 aa20.13■□□□□ 0.81
TRIM35-203ENST00000521253 NDUFS1P28331 727 aa20.13■□□□□ 0.81
TRIM35-203ENST00000521253 TSPAN7P41732 249 aa20.13■□□□□ 0.81
TRIM35-203ENST00000521253 PAFAH1B1P43034 410 aa20.13■□□□□ 0.81
TRIM35-203ENST00000521253 ARCN1P48444 511 aaKnown RBP20.13■□□□□ 0.81
TRIM35-203ENST00000521253 PPP1CAP62136 330 aa20.13■□□□□ 0.81
TRIM35-203ENST00000521253 TLE3Q04726 772 aa20.13■□□□□ 0.81
TRIM35-203ENST00000521253 BOP1Q14137 746 aaKnown RBP20.13■□□□□ 0.81
TRIM35-203ENST00000521253 KRT33BQ14525 404 aa20.13■□□□□ 0.81
TRIM35-203ENST00000521253 IRGCQ6NXR0 463 aa20.13■□□□□ 0.81
TRIM35-203ENST00000521253 PDZD3Q86UT5 571 aa20.13■□□□□ 0.81
TRIM35-203ENST00000521253 LKAAEAR1Q8TD35 194 aa20.13■□□□□ 0.81
TRIM35-203ENST00000521253 ART4Q93070 314 aa20.13■□□□□ 0.81
TRIM35-203ENST00000521253 TAAR9Q96RI9 348 aa20.13■□□□□ 0.81
TRIM35-203ENST00000521253 FERD3LQ96RJ6 166 aa20.13■□□□□ 0.81
TRIM35-203ENST00000521253 RAB33BQ9H082 229 aa20.13■□□□□ 0.81
TRIM35-203ENST00000521253 RNF14Q9UBS8 474 aa20.13■□□□□ 0.81
TRIM35-203ENST00000521253 FAM237BA0A1B0GVD1 139 aa20.12■□□□□ 0.81
TRIM35-203ENST00000521253 SLC5A10A0PJK1 596 aa20.12■□□□□ 0.81
TRIM35-203ENST00000521253 MAGEB16A2A368 324 aa20.12■□□□□ 0.81
TRIM35-203ENST00000521253 IQCF5A8MTL0 148 aa20.12■□□□□ 0.81
TRIM35-203ENST00000521253 KLK10O43240 276 aa20.12■□□□□ 0.81
TRIM35-203ENST00000521253 NDUFS3O75489 264 aa20.12■□□□□ 0.81
TRIM35-203ENST00000521253 PAMP19021 973 aa20.12■□□□□ 0.81
TRIM35-203ENST00000521253 DR1Q01658 176 aa20.12■□□□□ 0.81
TRIM35-203ENST00000521253 ANKRD20A4Q4UJ75 823 aa20.12■□□□□ 0.81
TRIM35-203ENST00000521253 SYTL3Q4VX76 610 aa20.12■□□□□ 0.81
TRIM35-203ENST00000521253 TMEM164Q5U3C3 297 aa20.12■□□□□ 0.81
TRIM35-203ENST00000521253 MRNIPQ6NTE8 343 aa20.12■□□□□ 0.81
TRIM35-203ENST00000521253 KLHL35Q6PF15 583 aa20.12■□□□□ 0.81
TRIM35-203ENST00000521253 FAM92BQ6ZTR7 304 aa20.12■□□□□ 0.81
TRIM35-203ENST00000521253 PHC3Q8NDX5 983 aa20.12■□□□□ 0.81
TRIM35-203ENST00000521253 TFGQ92734 400 aaPredicted RBP20.12■□□□□ 0.81
TRIM35-203ENST00000521253 ZNF669Q96BR6 464 aaPredicted RBP20.12■□□□□ 0.81
TRIM35-203ENST00000521253 ZDHHC12Q96GR4 267 aa20.12■□□□□ 0.81
TRIM35-203ENST00000521253 CRELD1Q96HD1 420 aa20.12■□□□□ 0.81
TRIM35-203ENST00000521253 SIGLEC10Q96LC7 697 aa20.12■□□□□ 0.81
TRIM35-203ENST00000521253 RUNDC3BQ96NL0 473 aa20.12■□□□□ 0.81
TRIM35-203ENST00000521253 FCRL3Q96P31 734 aaPredicted RBP20.12■□□□□ 0.81
TRIM35-203ENST00000521253 DPH1Q9BZG8 443 aa20.12■□□□□ 0.81
TRIM35-203ENST00000521253 B3GNT4Q9C0J1 378 aa20.12■□□□□ 0.81
TRIM35-203ENST00000521253 P2RY12Q9H244 342 aa20.12■□□□□ 0.81
TRIM35-203ENST00000521253 SLC39A1Q9NY26 324 aa20.12■□□□□ 0.81
TRIM35-203ENST00000521253 PCDHGA3Q9Y5H0 932 aa20.12■□□□□ 0.81
TRIM35-203ENST00000521253 OR5K3A6NET4 321 aa20.11■□□□□ 0.81
TRIM35-203ENST00000521253 BHMG1C9JSJ3 638 aaPredicted RBP20.11■□□□□ 0.81
TRIM35-203ENST00000521253 CCDC188H7C350 402 aa20.11■□□□□ 0.81
TRIM35-203ENST00000521253 TOX3O15405 576 aaPredicted RBP20.11■□□□□ 0.81
TRIM35-203ENST00000521253 RASSF9O75901 435 aa20.11■□□□□ 0.81
TRIM35-203ENST00000521253 IVDP26440 423 aa20.11■□□□□ 0.81
TRIM35-203ENST00000521253 CCR7P32248 378 aa20.11■□□□□ 0.81
TRIM35-203ENST00000521253 SEPHS1P49903 392 aa20.11■□□□□ 0.81
TRIM35-203ENST00000521253 ETF1P62495 437 aaKnown RBP20.11■□□□□ 0.81
TRIM35-203ENST00000521253 PLOD1Q02809 727 aaPredicted RBP20.11■□□□□ 0.81
TRIM35-203ENST00000521253 CLN3Q13286 438 aa20.11■□□□□ 0.81
TRIM35-203ENST00000521253 DHX34Q14147 1143 aaKnown RBP20.11■□□□□ 0.81
TRIM35-203ENST00000521253 IZUMO3Q5VZ72 239 aa20.11■□□□□ 0.81
TRIM35-203ENST00000521253 SYDE1Q6ZW31 735 aaPredicted RBP20.11■□□□□ 0.81
TRIM35-203ENST00000521253 PRSS42Q7Z5A4 293 aa20.11■□□□□ 0.81
TRIM35-203ENST00000521253 TMEM135Q86UB9 458 aa20.11■□□□□ 0.81
TRIM35-203ENST00000521253 ACVR1CQ8NER5 493 aa20.11■□□□□ 0.81
TRIM35-203ENST00000521253 CARD6Q9BX69 1037 aa20.11■□□□□ 0.81
TRIM35-203ENST00000521253 TSSK1BQ9BXA7 367 aa20.11■□□□□ 0.81
TRIM35-203ENST00000521253 ZNF768Q9H5H4 540 aaKnown RBP20.11■□□□□ 0.81
TRIM35-203ENST00000521253 MVB12BQ9H7P6 319 aa20.11■□□□□ 0.81
TRIM35-203ENST00000521253 HRASLS2Q9NWW9 162 aa20.11■□□□□ 0.81
TRIM35-203ENST00000521253 IL1RAPL1Q9NZN1 696 aa20.11■□□□□ 0.81
TRIM35-203ENST00000521253 B3GALT1Q9Y5Z6 326 aa20.11■□□□□ 0.81
TRIM35-203ENST00000521253 MAD1L1Q9Y6D9 718 aa20.11■□□□□ 0.81
TRIM35-203ENST00000521253 RPS6KL1Q9Y6S9 549 aa20.11■□□□□ 0.81
TRIM35-203ENST00000521253 PIKFYVEQ9Y2I7 2098 aa20.11■□□□□ 0.81
TRIM35-203ENST00000521253 ZCWPW2A0A1B0GU75 182 aa20.1■□□□□ 0.81
TRIM35-203ENST00000521253 OR6C74A6NCV1 312 aa20.1■□□□□ 0.81
TRIM35-203ENST00000521253 RPS3P23396 243 aaKnown RBP eCLIP20.1■□□□□ 0.81
TRIM35-203ENST00000521253 ACADLP28330 430 aa20.1■□□□□ 0.81
TRIM35-203ENST00000521253 CSE1LP55060 971 aaKnown RBP20.1■□□□□ 0.81
TRIM35-203ENST00000521253 MC2RQ01718 297 aa20.1■□□□□ 0.81
TRIM35-203ENST00000521253 TYSND1Q2T9J0 566 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms