RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 C12orf29Q8N999 325 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 HJURPQ8NCD3 748 aaPredicted RBP3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 CCDC112Q8NEF3 446 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 GPR156Q8NFN8 814 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 LMX1AQ8TE12 382 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 RNF139Q8WU17 664 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 KIAA1143Q96AT1 154 aaPredicted RBP3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 HDAC11Q96DB2 347 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 HMCESQ96FZ2 354 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 C5orf34Q96MH7 638 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 TEFMQ96QE5 360 aaKnown RBP3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 PLIN2Q99541 437 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 DDA1Q9BW61 102 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 SPRY4Q9C004 299 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 CGNQ9P2M7 1197 aaKnown RBP3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 SCOCQ9UIL1 159 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 INTS6Q9UL03 887 aaKnown RBP3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 PNMA8BQ9ULN7 279 aaPredicted RBP3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 NAALADL1Q9UQQ1 740 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 MTO1Q9Y2Z2 717 aaKnown RBP3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 SDK2Q58EX2 2172 aa3.69□□□□□ -1.82
PDLIM5-218ENST00000513341 FRMD3A2A2Y4 597 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 POM121BA6NF01 834 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 TMEM110-MUSTN1A8MSY1 372 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 NKX2-8O15522 239 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 ACSL4O60488 711 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 DTNBO60941 627 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 GCATO75600 419 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 RFPL1O75677 317 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 GCNT3O95395 438 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 CPNE6O95741 557 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 ZBED1O96006 694 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 PAK4O96013 591 aaPredicted RBP3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 IGLV3-27P01718 113 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 CD1AP06126 327 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 DLATP10515 647 aaKnown RBP3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 OSMP13725 252 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 CCDC130P13994 396 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 LIFP15018 202 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 ITIH1P19827 911 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 TCN2P20062 427 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 ITGA3P26006 1051 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 MAN1A1P33908 653 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 LONP1P36776 959 aaKnown RBP3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 PEX5P50542 639 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 NDST1P52848 882 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 THOP1P52888 689 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 HMGN5P82970 282 aaKnown RBP3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 INCA1Q0VD86 236 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 MGAT2Q10469 447 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 CDH18Q13634 790 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 PDE1CQ14123 709 aaPredicted RBP3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 PCBP2Q15366 365 aaKnown RBP eCLIP3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 ZNF699Q32M78 642 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 POM121L1PQ3SYA9 428 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 FAM133BQ5BKY9 247 aaKnown RBP3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 ZNF542PQ5EBM4 170 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 FSCBQ5H9T9 825 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 PIP5KL1Q5T9C9 394 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 PIM3Q86V86 326 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 SFR1Q86XK3 245 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 GKN2Q86XP6 184 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 CBWD2Q8IUF1 395 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 APLFQ8IW19 511 aaPredicted RBP3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 CACNA2D3Q8IZS8 1091 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 SCML4Q8N228 414 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 NECAB1Q8N987 351 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 Q8NA96 180 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 XXYLT1Q8NBI6 393 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 DENND6BQ8NEG7 585 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 TMEM174Q8WUU8 243 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 JADE3Q92613 823 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 DNAJC19Q96DA6 116 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 TEKT5Q96M29 485 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 CCDC114Q96M63 670 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 ZPBPQ9BS86 351 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 BCO1Q9HAY6 547 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 CYP3A43Q9HB55 503 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 ERRFI1Q9UJM3 462 aaPredicted RBP3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 PILRAQ9UKJ1 303 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 SARDHQ9UL12 918 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 TP53TG5Q9Y2B4 290 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 CA5BQ9Y2D0 317 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 LUC7L2Q9Y383 392 aaKnown RBP3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 CEP83Q9Y592 693 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 RNF215Q9Y6U7 377 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 NYNRINQ9P2P1 1898 aaKnown RBP3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 ADGRG4Q8IZF6 3080 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 ANKHD1Q8IWZ3 2542 aaKnown RBP3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 SHANK1Q9Y566 2161 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 CELSR1Q9NYQ6 3014 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 SPG11Q96JI7 2443 aa3.68□□□□□ -1.82
PDLIM5-218ENST00000513341 TACC2O95359 2948 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 TCP11X1B4DZS4 312 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 B4E171 279 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 AKAP10O43572 662 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 TSPAN6O43657 245 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 AP1G1O43747 822 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 NUDT21O43809 227 aaKnown RBP3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 AKR1B10O60218 316 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms