RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 TRIT1Q9H3H1 467 aaKnown RBP13.92□□□□□ -0.18
RAB28-205ENST00000508274 CROTQ9UKG9 612 aa13.92□□□□□ -0.18
RAB28-205ENST00000508274 PRSS21Q9Y6M0 314 aa13.92□□□□□ -0.18
RAB28-205ENST00000508274 UBA6A0AVT1 1052 aaPredicted RBP13.91□□□□□ -0.18
RAB28-205ENST00000508274 TLCD2A6NGC4 264 aa13.91□□□□□ -0.18
RAB28-205ENST00000508274 GOLGA6L6A8MZA4 724 aa13.91□□□□□ -0.18
RAB28-205ENST00000508274 PSMD3O43242 534 aa13.91□□□□□ -0.18
RAB28-205ENST00000508274 KRT86O43790 486 aa13.91□□□□□ -0.18
RAB28-205ENST00000508274 POLR2CP19387 275 aaPredicted RBP13.91□□□□□ -0.18
RAB28-205ENST00000508274 PREPP48147 710 aa13.91□□□□□ -0.18
RAB28-205ENST00000508274 KPNA2P52292 529 aaKnown RBP13.91□□□□□ -0.18
RAB28-205ENST00000508274 CACNG1Q06432 222 aa13.91□□□□□ -0.18
RAB28-205ENST00000508274 MAP7Q14244 749 aa13.91□□□□□ -0.18
RAB28-205ENST00000508274 C6orf15Q6UXA7 325 aaPredicted RBP13.91□□□□□ -0.18
RAB28-205ENST00000508274 OR4E2Q8NGC2 313 aa13.91□□□□□ -0.18
RAB28-205ENST00000508274 HEXDCQ8WVB3 486 aa13.91□□□□□ -0.18
RAB28-205ENST00000508274 STAMBPL1Q96FJ0 436 aa13.91□□□□□ -0.18
RAB28-205ENST00000508274 CCM2Q9BSQ5 444 aa13.91□□□□□ -0.18
RAB28-205ENST00000508274 OR52A5Q9H2C5 316 aa13.91□□□□□ -0.18
RAB28-205ENST00000508274 STARD5Q9NSY2 213 aa13.91□□□□□ -0.18
RAB28-205ENST00000508274 SLC2A6Q9UGQ3 507 aa13.91□□□□□ -0.18
RAB28-205ENST00000508274 ZNF148Q9UQR1 794 aa13.91□□□□□ -0.18
RAB28-205ENST00000508274 C17orf113A0A1B0GUU1 675 aa13.9□□□□□ -0.18
RAB28-205ENST00000508274 SLC28A2O43868 658 aa13.9□□□□□ -0.18
RAB28-205ENST00000508274 ZSCAN5DPP0CG00 497 aa13.9□□□□□ -0.18
RAB28-205ENST00000508274 MSNP26038 577 aaKnown RBP13.9□□□□□ -0.18
RAB28-205ENST00000508274 STIP1P31948 543 aaKnown RBP13.9□□□□□ -0.18
RAB28-205ENST00000508274 FOXN2P32314 431 aa13.9□□□□□ -0.18
RAB28-205ENST00000508274 DLSTP36957 453 aa13.9□□□□□ -0.18
RAB28-205ENST00000508274 POLE2P56282 527 aa13.9□□□□□ -0.18
RAB28-205ENST00000508274 GSDMDP57764 484 aa13.9□□□□□ -0.18
RAB28-205ENST00000508274 KRT33BQ14525 404 aa13.9□□□□□ -0.18
RAB28-205ENST00000508274 KCTD19Q17RG1 926 aaPredicted RBP13.9□□□□□ -0.18
RAB28-205ENST00000508274 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.9□□□□□ -0.18
RAB28-205ENST00000508274 MEI1Q5TIA1 1274 aa13.9□□□□□ -0.18
RAB28-205ENST00000508274 PWWP2BQ6NUJ5 590 aa13.9□□□□□ -0.18
RAB28-205ENST00000508274 C16orf46Q6P387 395 aa13.9□□□□□ -0.18
RAB28-205ENST00000508274 PRICKLE2Q7Z3G6 844 aa13.9□□□□□ -0.18
RAB28-205ENST00000508274 DNAAF3Q8N9W5 541 aa13.9□□□□□ -0.18
RAB28-205ENST00000508274 PHC3Q8NDX5 983 aa13.9□□□□□ -0.18
RAB28-205ENST00000508274 ACVR1CQ8NER5 493 aa13.9□□□□□ -0.18
RAB28-205ENST00000508274 OR13J1Q8NGT2 312 aa13.9□□□□□ -0.18
RAB28-205ENST00000508274 ZNF778Q96MU6 729 aa13.9□□□□□ -0.18
RAB28-205ENST00000508274 FERD3LQ96RJ6 166 aa13.9□□□□□ -0.18
RAB28-205ENST00000508274 CD180Q99467 661 aa13.9□□□□□ -0.18
RAB28-205ENST00000508274 LZTFL1Q9NQ48 299 aa13.9□□□□□ -0.18
RAB28-205ENST00000508274 SMARCAL1Q9NZC9 954 aa13.9□□□□□ -0.18
RAB28-205ENST00000508274 RARRES3Q9UL19 164 aa13.9□□□□□ -0.18
RAB28-205ENST00000508274 COLEC10Q9Y6Z7 277 aa13.9□□□□□ -0.18
RAB28-205ENST00000508274 CCDC162PA2VCL2 907 aa13.89□□□□□ -0.19
RAB28-205ENST00000508274 GOLGA6L3A6NEY3 463 aa13.89□□□□□ -0.19
RAB28-205ENST00000508274 J3QKU1 62 aa13.89□□□□□ -0.19
RAB28-205ENST00000508274 TERTO14746 1132 aaKnown RBP13.89□□□□□ -0.19
RAB28-205ENST00000508274 ARHGAP6O43182 974 aa13.89□□□□□ -0.19
RAB28-205ENST00000508274 PSMA3P25788 255 aa13.89□□□□□ -0.19
RAB28-205ENST00000508274 CDH17Q12864 832 aa13.89□□□□□ -0.19
RAB28-205ENST00000508274 SIX1Q15475 284 aaPredicted RBP13.89□□□□□ -0.19
RAB28-205ENST00000508274 GPR19Q15760 415 aa13.89□□□□□ -0.19
RAB28-205ENST00000508274 NAPRTQ6XQN6 538 aa13.89□□□□□ -0.19
RAB28-205ENST00000508274 LINC00523Q86TU6 105 aa13.89□□□□□ -0.19
RAB28-205ENST00000508274 D2HGDHQ8N465 521 aa13.89□□□□□ -0.19
RAB28-205ENST00000508274 ZFPM2Q8WW38 1151 aa13.89□□□□□ -0.19
RAB28-205ENST00000508274 HGH1Q9BTY7 390 aa13.89□□□□□ -0.19
RAB28-205ENST00000508274 EFHD1Q9BUP0 239 aa13.89□□□□□ -0.19
RAB28-205ENST00000508274 AKIRIN1Q9H9L7 192 aaPredicted RBP13.89□□□□□ -0.19
RAB28-205ENST00000508274 PDE7BQ9NP56 450 aa13.89□□□□□ -0.19
RAB28-205ENST00000508274 RAB6BQ9NRW1 208 aa13.89□□□□□ -0.19
RAB28-205ENST00000508274 FGF21Q9NSA1 209 aa13.89□□□□□ -0.19
RAB28-205ENST00000508274 GEMIN8Q9NWZ8 242 aaKnown RBP13.89□□□□□ -0.19
RAB28-205ENST00000508274 HEBP2Q9Y5Z4 205 aa13.89□□□□□ -0.19
RAB28-205ENST00000508274 SPENQ96T58 3664 aaKnown RBP13.89□□□□□ -0.19
RAB28-205ENST00000508274 ERI2A8K979 691 aaKnown RBP13.88□□□□□ -0.19
RAB28-205ENST00000508274 BTN3A1O00481 513 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 SUN1O94901 812 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 NTRK1P04629 796 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 FURINP09958 794 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 TCN2P20062 427 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 NDUFS1P28331 727 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 FDFT1P37268 417 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 LMAN1P49257 510 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 ARL4DP49703 201 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 PRKG2Q13237 762 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 BRD3Q15059 726 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 RPS6KA1Q15418 735 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 DEFB109BQ30KR1 87 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 ARMC6Q6NXE6 501 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 PPP1R21Q6ZMI0 780 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 KMT5CQ86Y97 462 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 OR52E1Q8NGJ3 308 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 LCN9Q8WX39 176 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 CATSPER2Q96P56 530 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 ALS2CR12Q96Q35 445 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 RUFY1Q96T51 708 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 FRMD8P1Q9BZ68 369 aaPredicted RBP13.88□□□□□ -0.19
RAB28-205ENST00000508274 TRIM4Q9C037 500 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 FAM117AQ9C073 453 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 SLC25A18Q9H1K4 315 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 SRMSQ9H3Y6 488 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 XKR8Q9H6D3 395 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 VPS37BQ9H9H4 285 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms