RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 APOA4P06727 396 aa18.87■□□□□ 0.61
LMNA-221ENST00000506981 RPS3P23396 243 aaKnown RBP eCLIP18.87■□□□□ 0.613e-9■■■■□ 19.3
LMNA-221ENST00000506981 MPSTP25325 297 aa18.87■□□□□ 0.61
LMNA-221ENST00000506981 CSTF2P33240 577 aaKnown RBP eCLIP18.87■□□□□ 0.61
LMNA-221ENST00000506981 CAPZBP47756 277 aa18.87■□□□□ 0.61
LMNA-221ENST00000506981 ARCN1P48444 511 aaKnown RBP18.87■□□□□ 0.61
LMNA-221ENST00000506981 ARL4CP56559 192 aa18.87■□□□□ 0.61
LMNA-221ENST00000506981 CALCOCO2Q13137 446 aa18.87■□□□□ 0.61
LMNA-221ENST00000506981 HIF1AQ16665 826 aa18.87■□□□□ 0.61
LMNA-221ENST00000506981 TYSND1Q2T9J0 566 aa18.87■□□□□ 0.61
LMNA-221ENST00000506981 TBC1D25Q3MII6 688 aa18.87■□□□□ 0.61
LMNA-221ENST00000506981 ZNF470Q6ECI4 717 aa18.87■□□□□ 0.61
LMNA-221ENST00000506981 IGF2-ASQ6U949 168 aa18.87■□□□□ 0.61
LMNA-221ENST00000506981 XKR5Q6UX68 686 aa18.87■□□□□ 0.61
LMNA-221ENST00000506981 PDZD3Q86UT5 571 aa18.87■□□□□ 0.61
LMNA-221ENST00000506981 LMNTD2Q8IXW0 634 aa18.87■□□□□ 0.61
LMNA-221ENST00000506981 RCBTB1Q8NDN9 531 aa18.87■□□□□ 0.61
LMNA-221ENST00000506981 GSDMBQ8TAX9 411 aa18.87■□□□□ 0.61
LMNA-221ENST00000506981 ZNF578Q96N58 590 aaPredicted RBP18.87■□□□□ 0.61
LMNA-221ENST00000506981 FCRL3Q96P31 734 aaPredicted RBP18.87■□□□□ 0.61
LMNA-221ENST00000506981 C20orf96Q9NUD7 363 aaPredicted RBP18.87■□□□□ 0.61
LMNA-221ENST00000506981 TMEM9Q9P0T7 183 aa18.87■□□□□ 0.61
LMNA-221ENST00000506981 PISDQ9UG56 409 aa18.87■□□□□ 0.61
LMNA-221ENST00000506981 KLHL3Q9UH77 587 aa18.87■□□□□ 0.61
LMNA-221ENST00000506981 URB1O60287 2271 aaKnown RBP18.86■□□□□ 0.61
LMNA-221ENST00000506981 FRYQ5TBA9 3013 aa18.86■□□□□ 0.61
LMNA-221ENST00000506981 MN1Q10571 1320 aaPredicted RBP18.86■□□□□ 0.61
LMNA-221ENST00000506981 H3BMM5 538 aa18.86■□□□□ 0.61
LMNA-221ENST00000506981 KPNA5O15131 536 aa18.86■□□□□ 0.61
LMNA-221ENST00000506981 TNFSF15O95150 251 aa18.86■□□□□ 0.61
LMNA-221ENST00000506981 CAPNS1P04632 268 aa18.86■□□□□ 0.61
LMNA-221ENST00000506981 PDHA2P29803 388 aa18.86■□□□□ 0.61
LMNA-221ENST00000506981 CSE1LP55060 971 aaKnown RBP18.86■□□□□ 0.61
LMNA-221ENST00000506981 ERVPABLB-1P60509 514 aa18.86■□□□□ 0.61
LMNA-221ENST00000506981 CFHR1Q03591 330 aa18.86■□□□□ 0.61
LMNA-221ENST00000506981 C16orf72Q14CZ0 275 aa18.86■□□□□ 0.61
LMNA-221ENST00000506981 ZNF658BQ4V348 819 aaPredicted RBP18.86■□□□□ 0.61
LMNA-221ENST00000506981 CILP2Q8IUL8 1156 aa18.86■□□□□ 0.61
LMNA-221ENST00000506981 KRT222Q8N1A0 295 aa18.86■□□□□ 0.61
LMNA-221ENST00000506981 AGBL5Q8NDL9 886 aa18.86■□□□□ 0.61
LMNA-221ENST00000506981 ASZ1Q8WWH4 475 aa18.86■□□□□ 0.61
LMNA-221ENST00000506981 RSC1A1Q92681 617 aa18.86■□□□□ 0.61
LMNA-221ENST00000506981 TFGQ92734 400 aaPredicted RBP18.86■□□□□ 0.61
LMNA-221ENST00000506981 EBNA1BP2Q99848 306 aaKnown RBP18.86■□□□□ 0.61
LMNA-221ENST00000506981 FAM167BQ9BTA0 163 aa18.86■□□□□ 0.61
LMNA-221ENST00000506981 P2RY12Q9H244 342 aa18.86■□□□□ 0.61
LMNA-221ENST00000506981 KIR3DX1Q9H7L2 352 aa18.86■□□□□ 0.61
LMNA-221ENST00000506981 MVB12BQ9H7P6 319 aa18.86■□□□□ 0.61
LMNA-221ENST00000506981 INTS10Q9NVR2 710 aaKnown RBP18.86■□□□□ 0.61
LMNA-221ENST00000506981 IL1RAPL1Q9NZN1 696 aa18.86■□□□□ 0.61
LMNA-221ENST00000506981 SLC24A2Q9UI40 661 aa18.86■□□□□ 0.61
LMNA-221ENST00000506981 SNX24Q9Y343 169 aa18.86■□□□□ 0.61
LMNA-221ENST00000506981 UTP11Q9Y3A2 253 aaKnown RBP18.86■□□□□ 0.61
LMNA-221ENST00000506981 FAM169AQ9Y6X4 670 aa18.86■□□□□ 0.61
LMNA-221ENST00000506981 ADAMTS20P59510 1910 aa18.85■□□□□ 0.61
LMNA-221ENST00000506981 ZCWPW2A0A1B0GU75 182 aa18.85■□□□□ 0.61
LMNA-221ENST00000506981 A0A1W2PNU3 283 aaPredicted RBP18.85■□□□□ 0.61
LMNA-221ENST00000506981 SLC5A10A0PJK1 596 aa18.85■□□□□ 0.61
LMNA-221ENST00000506981 A8MU76 341 aa18.85■□□□□ 0.61
LMNA-221ENST00000506981 RAD51CO43502 376 aa18.85■□□□□ 0.61
LMNA-221ENST00000506981 ITGA2BP08514 1039 aa18.85■□□□□ 0.61
LMNA-221ENST00000506981 HGFP14210 728 aa18.85■□□□□ 0.61
LMNA-221ENST00000506981 RPL21P46778 160 aaKnown RBP18.85■□□□□ 0.61
LMNA-221ENST00000506981 HSPA14Q0VDF9 509 aa18.85■□□□□ 0.61
LMNA-221ENST00000506981 CRYMQ14894 314 aa18.85■□□□□ 0.61
LMNA-221ENST00000506981 WHAMMP3Q1A5X7 153 aa18.85■□□□□ 0.61
LMNA-221ENST00000506981 SPANXN3Q5MJ09 141 aa18.85■□□□□ 0.61
LMNA-221ENST00000506981 ARMC6Q6NXE6 501 aa18.85■□□□□ 0.61
LMNA-221ENST00000506981 IRGCQ6NXR0 463 aa18.85■□□□□ 0.61
LMNA-221ENST00000506981 KCNMB4Q86W47 210 aa18.85■□□□□ 0.61
LMNA-221ENST00000506981 OOSP2Q86WS3 158 aa18.85■□□□□ 0.61
LMNA-221ENST00000506981 AGGF1Q8N302 714 aaeCLIP18.85■□□□□ 0.61
LMNA-221ENST00000506981 ACVR1CQ8NER5 493 aa18.85■□□□□ 0.61
LMNA-221ENST00000506981 LPGAT1Q92604 370 aa18.85■□□□□ 0.61
LMNA-221ENST00000506981 FGF11Q92914 225 aa18.85■□□□□ 0.61
LMNA-221ENST00000506981 LRRC39Q96DD0 335 aa18.85■□□□□ 0.61
LMNA-221ENST00000506981 ZDHHC12Q96GR4 267 aa18.85■□□□□ 0.61
LMNA-221ENST00000506981 SLC46A1Q96NT5 459 aa18.85■□□□□ 0.61
LMNA-221ENST00000506981 TGM7Q96PF1 710 aa18.85■□□□□ 0.61
LMNA-221ENST00000506981 ERP44Q9BS26 406 aa18.85■□□□□ 0.61
LMNA-221ENST00000506981 RAB17Q9H0T7 212 aa18.85■□□□□ 0.61
LMNA-221ENST00000506981 CCDC68Q9H2F9 335 aa18.85■□□□□ 0.61
LMNA-221ENST00000506981 DPH5Q9H2P9 285 aa18.85■□□□□ 0.61
LMNA-221ENST00000506981 OGFRQ9NZT2 677 aa18.85■□□□□ 0.61
LMNA-221ENST00000506981 IQCF5A8MTL0 148 aa18.84■□□□□ 0.61
LMNA-221ENST00000506981 CAPN5O15484 640 aaPredicted RBP18.84■□□□□ 0.61
LMNA-221ENST00000506981 KDM1AO60341 852 aa18.84■□□□□ 0.61
LMNA-221ENST00000506981 BANF1O75531 89 aa18.84■□□□□ 0.61
LMNA-221ENST00000506981 RASSF9O75901 435 aa18.84■□□□□ 0.61
LMNA-221ENST00000506981 ESR1P03372 595 aa18.84■□□□□ 0.61
LMNA-221ENST00000506981 FMO4P31512 558 aa18.84■□□□□ 0.61
LMNA-221ENST00000506981 CCR7P32248 378 aa18.84■□□□□ 0.61
LMNA-221ENST00000506981 MAPK10P53779 464 aa18.84■□□□□ 0.61
LMNA-221ENST00000506981 GFERP55789 205 aa18.84■□□□□ 0.61
LMNA-221ENST00000506981 PCBP4P57723 403 aaKnown RBP18.84■□□□□ 0.61
LMNA-221ENST00000506981 MRPS25P82663 173 aaKnown RBP18.84■□□□□ 0.61
LMNA-221ENST00000506981 NAPRTQ6XQN6 538 aa18.84■□□□□ 0.61
LMNA-221ENST00000506981 OTOAQ7RTW8 1153 aa18.84■□□□□ 0.61
LMNA-221ENST00000506981 ZNF572Q7Z3I7 529 aaPredicted RBP18.84■□□□□ 0.61
LMNA-221ENST00000506981 FAM129CQ86XR2 697 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms