RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 PAIP2BQ9ULR5 123 aaKnown RBP14.74□□□□□ -0.05
SNF8-203ENST00000504000 SLC28A1O00337 649 aa14.73□□□□□ -0.05
SNF8-203ENST00000504000 GSTA4O15217 222 aa14.73□□□□□ -0.05
SNF8-203ENST00000504000 RGS14O43566 566 aa14.73□□□□□ -0.05
SNF8-203ENST00000504000 F11P03951 625 aa14.73□□□□□ -0.05
SNF8-203ENST00000504000 UGT2B4P06133 528 aa14.73□□□□□ -0.05
SNF8-203ENST00000504000 HTR1AP08908 422 aa14.73□□□□□ -0.05
SNF8-203ENST00000504000 TFPTP0C1Z6 253 aa14.73□□□□□ -0.05
SNF8-203ENST00000504000 OXCT1P55809 520 aa14.73□□□□□ -0.05
SNF8-203ENST00000504000 CYP4F3Q08477 520 aa14.73□□□□□ -0.05
SNF8-203ENST00000504000 SMARCB1Q12824 385 aa14.73□□□□□ -0.05
SNF8-203ENST00000504000 TRAF3Q13114 568 aa14.73□□□□□ -0.05
SNF8-203ENST00000504000 BFSP2Q13515 415 aa14.73□□□□□ -0.05
SNF8-203ENST00000504000 ZNF846Q147U1 533 aa14.73□□□□□ -0.05
SNF8-203ENST00000504000 VARS2Q5ST30 1063 aaKnown RBP14.73□□□□□ -0.05
SNF8-203ENST00000504000 ATG9BQ674R7 924 aa14.73□□□□□ -0.05
SNF8-203ENST00000504000 SBSNQ6UWP8 590 aa14.73□□□□□ -0.05
SNF8-203ENST00000504000 TRIM46Q7Z4K8 759 aa14.73□□□□□ -0.05
SNF8-203ENST00000504000 MINDY2Q8NBR6 621 aa14.73□□□□□ -0.05
SNF8-203ENST00000504000 BPIFB6Q8NFQ5 453 aa14.73□□□□□ -0.05
SNF8-203ENST00000504000 SLC47A1Q96FL8 570 aa14.73□□□□□ -0.05
SNF8-203ENST00000504000 C17orf80Q9BSJ5 609 aa14.73□□□□□ -0.05
SNF8-203ENST00000504000 PIF1Q9H611 641 aa14.73□□□□□ -0.05
SNF8-203ENST00000504000 ACTR8Q9H981 624 aa14.73□□□□□ -0.05
SNF8-203ENST00000504000 SCUBE2Q9NQ36 999 aa14.73□□□□□ -0.05
SNF8-203ENST00000504000 SNX5Q9Y5X3 404 aa14.73□□□□□ -0.05
SNF8-203ENST00000504000 V9GYQ6 96 aa14.73□□□□□ -0.05
SNF8-203ENST00000504000 LOC100130705A0A1B0GUX0 176 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 ILVBLA1L0T0 632 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 TMEM221A6NGB7 291 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 H3BNC9 293 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 K7EPI3 171 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 KPNA4O00629 521 aaPredicted RBP14.72□□□□□ -0.05
SNF8-203ENST00000504000 RAD51BO15315 384 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 STX7O15400 261 aaKnown RBP14.72□□□□□ -0.05
SNF8-203ENST00000504000 OR1I1O60431 355 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 ACSL4O60488 711 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 UGT2B11O75310 529 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 SERPINB7O75635 380 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 S100BP04271 92 aaPredicted RBP14.72□□□□□ -0.05
SNF8-203ENST00000504000 TPP2P29144 1249 aaPredicted RBP14.72□□□□□ -0.05
SNF8-203ENST00000504000 RGRP47804 291 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 CDKN1CP49918 316 aaPredicted RBP14.72□□□□□ -0.05
SNF8-203ENST00000504000 HTR6P50406 440 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 DGKQP52824 942 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 ABRAXAS2Q15018 415 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 ACOX1Q15067 660 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 MAPKAPK3Q16644 382 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 RUNDC3AQ59EK9 446 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 ZNF691Q5VV52 312 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 GALNT18Q6P9A2 607 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 SLC16A12Q6ZSM3 486 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 GPR149Q86SP6 731 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 HIPK1Q86Z02 1210 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 PLPP6Q8IY26 295 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 LGI2Q8N0V4 545 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 EID3Q8N140 333 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 KLHDC9Q8NEP7 349 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 ABHD11Q8NFV4 315 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 ESAMQ96AP7 390 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 CCDC138Q96M89 665 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 CDK15Q96Q40 435 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 FUNDC2Q9BWH2 189 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 ZNF408Q9H9D4 720 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 DCAF13Q9NV06 445 aaKnown RBP14.72□□□□□ -0.05
SNF8-203ENST00000504000 FKBPLQ9UIM3 349 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 BAG5Q9UL15 447 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 CORINQ9Y5Q5 1042 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 HSPE1-MOB4S4R3N1 261 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 TRBV5-3A0A0A0MS03 114 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 CLDN25C9JDP6 229 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 CXCR6O00574 342 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 PRMT5O14744 637 aaPredicted RBP14.72□□□□□ -0.05
SNF8-203ENST00000504000 DFNA5O60443 496 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 MRPS14O60783 128 aaKnown RBP14.72□□□□□ -0.05
SNF8-203ENST00000504000 ATP6V1G1O75348 118 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 BCAS1O75363 584 aaPredicted RBP14.72□□□□□ -0.05
SNF8-203ENST00000504000 CLDN11O75508 207 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 FUCA1P04066 466 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 ITGAMP11215 1152 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 PCNAP12004 261 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 PCMT1P22061 227 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 RPS3P23396 243 aaKnown RBP eCLIP14.72□□□□□ -0.05
SNF8-203ENST00000504000 ACVR2AP27037 513 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 SOX11P35716 441 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 HNRNPFP52597 415 aaKnown RBP14.72□□□□□ -0.05
SNF8-203ENST00000504000 RAD23AP54725 363 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 CXCR4P61073 352 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 CD47Q08722 323 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 KCNAB2Q13303 367 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 CRTC3Q6UUV7 619 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 MILR1Q7Z6M3 343 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 PARP8Q8N3A8 854 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 ZCCHC7Q8N3Z6 543 aaKnown RBP14.72□□□□□ -0.05
SNF8-203ENST00000504000 OR7D4Q8NG98 312 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 S100ZQ8WXG8 99 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 FIG4Q92562 907 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 RHBDF1Q96CC6 855 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 NODALQ96S42 347 aa14.72□□□□□ -0.05
SNF8-203ENST00000504000 WDR12Q9GZL7 423 aaKnown RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms