RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 SNF8Q96H20 258 aa15.56■□□□□ 0.08
LIME1-209ENST00000494776 SIGLEC10Q96LC7 697 aa15.56■□□□□ 0.08
LIME1-209ENST00000494776 FCRL3Q96P31 734 aaPredicted RBP15.56■□□□□ 0.08
LIME1-209ENST00000494776 TGM7Q96PF1 710 aa15.56■□□□□ 0.08
LIME1-209ENST00000494776 TCF12Q99081 682 aa15.56■□□□□ 0.08
LIME1-209ENST00000494776 TRIM56Q9BRZ2 755 aaKnown RBP15.56■□□□□ 0.08
LIME1-209ENST00000494776 OR52A5Q9H2C5 316 aa15.56■□□□□ 0.08
LIME1-209ENST00000494776 IL1RAPL1Q9NZN1 696 aa15.56■□□□□ 0.08
LIME1-209ENST00000494776 IQCF5A8MTL0 148 aa15.55■□□□□ 0.08
LIME1-209ENST00000494776 NDC80O14777 642 aa15.55■□□□□ 0.08
LIME1-209ENST00000494776 RRP8O43159 456 aaKnown RBP15.55■□□□□ 0.08
LIME1-209ENST00000494776 RASSF9O75901 435 aa15.55■□□□□ 0.08
LIME1-209ENST00000494776 PGAM1P18669 254 aa15.55■□□□□ 0.08
LIME1-209ENST00000494776 ITIH1P19827 911 aa15.55■□□□□ 0.08
LIME1-209ENST00000494776 OGNP20774 298 aaKnown RBP15.55■□□□□ 0.08
LIME1-209ENST00000494776 IVDP26440 423 aa15.55■□□□□ 0.08
LIME1-209ENST00000494776 MLLT3P42568 568 aaPredicted RBP15.55■□□□□ 0.08
LIME1-209ENST00000494776 CAPZBP47756 277 aa15.55■□□□□ 0.08
LIME1-209ENST00000494776 ARCN1P48444 511 aaKnown RBP15.55■□□□□ 0.08
LIME1-209ENST00000494776 ITGA8P53708 1063 aa15.55■□□□□ 0.08
LIME1-209ENST00000494776 PCBP4P57723 403 aaKnown RBP15.55■□□□□ 0.08
LIME1-209ENST00000494776 DHX9Q08211 1270 aaKnown RBP15.55■□□□□ 0.08
LIME1-209ENST00000494776 TMED2Q15363 201 aa15.55■□□□□ 0.08
LIME1-209ENST00000494776 LONRF1Q17RB8 773 aa15.55■□□□□ 0.08
LIME1-209ENST00000494776 ZNF658BQ4V348 819 aaPredicted RBP15.55■□□□□ 0.08
LIME1-209ENST00000494776 ARMC6Q6NXE6 501 aa15.55■□□□□ 0.08
LIME1-209ENST00000494776 IRGCQ6NXR0 463 aa15.55■□□□□ 0.08
LIME1-209ENST00000494776 IGF2-ASQ6U949 168 aa15.55■□□□□ 0.08
LIME1-209ENST00000494776 XKR5Q6UX68 686 aa15.55■□□□□ 0.08
LIME1-209ENST00000494776 LRRC69Q6ZNQ3 347 aa15.55■□□□□ 0.08
LIME1-209ENST00000494776 TMEM135Q86UB9 458 aa15.55■□□□□ 0.08
LIME1-209ENST00000494776 FAM129CQ86XR2 697 aa15.55■□□□□ 0.08
LIME1-209ENST00000494776 GSDMBQ8TAX9 411 aa15.55■□□□□ 0.08
LIME1-209ENST00000494776 RSC1A1Q92681 617 aa15.55■□□□□ 0.08
LIME1-209ENST00000494776 TFGQ92734 400 aaPredicted RBP15.55■□□□□ 0.08
LIME1-209ENST00000494776 ZDHHC12Q96GR4 267 aa15.55■□□□□ 0.08
LIME1-209ENST00000494776 PRR11Q96HE9 360 aaPredicted RBP15.55■□□□□ 0.08
LIME1-209ENST00000494776 PANX3Q96QZ0 392 aa15.55■□□□□ 0.08
LIME1-209ENST00000494776 CARD6Q9BX69 1037 aa15.55■□□□□ 0.08
LIME1-209ENST00000494776 KIR3DX1Q9H7L2 352 aa15.55■□□□□ 0.08
LIME1-209ENST00000494776 ASCL3Q9NQ33 180 aa15.55■□□□□ 0.08
LIME1-209ENST00000494776 C20orf96Q9NUD7 363 aaPredicted RBP15.55■□□□□ 0.08
LIME1-209ENST00000494776 OGFRQ9NZT2 677 aa15.55■□□□□ 0.08
LIME1-209ENST00000494776 VPS9D1Q9Y2B5 631 aa15.55■□□□□ 0.08
LIME1-209ENST00000494776 FAM187AA6NFU0 413 aa15.54■□□□□ 0.08
LIME1-209ENST00000494776 CAPN5O15484 640 aaPredicted RBP15.54■□□□□ 0.08
LIME1-209ENST00000494776 TLX3O43711 291 aaPredicted RBP15.54■□□□□ 0.08
LIME1-209ENST00000494776 URI1O94763 535 aaPredicted RBP15.54■□□□□ 0.08
LIME1-209ENST00000494776 APOA4P06727 396 aa15.54■□□□□ 0.08
LIME1-209ENST00000494776 FMO4P31512 558 aa15.54■□□□□ 0.08
LIME1-209ENST00000494776 GFERP55789 205 aa15.54■□□□□ 0.08
LIME1-209ENST00000494776 ARL4CP56559 192 aa15.54■□□□□ 0.08
LIME1-209ENST00000494776 MRPS25P82663 173 aaKnown RBP15.54■□□□□ 0.08
LIME1-209ENST00000494776 CKAP4Q07065 602 aaKnown RBP15.54■□□□□ 0.08
LIME1-209ENST00000494776 HSPA14Q0VDF9 509 aa15.54■□□□□ 0.08
LIME1-209ENST00000494776 TMEM164Q5U3C3 297 aa15.54■□□□□ 0.08
LIME1-209ENST00000494776 ZNF470Q6ECI4 717 aa15.54■□□□□ 0.08
LIME1-209ENST00000494776 PDZD3Q86UT5 571 aa15.54■□□□□ 0.08
LIME1-209ENST00000494776 OOSP2Q86WS3 158 aa15.54■□□□□ 0.08
LIME1-209ENST00000494776 KRT222Q8N1A0 295 aa15.54■□□□□ 0.08
LIME1-209ENST00000494776 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.54■□□□□ 0.08
LIME1-209ENST00000494776 BBOF1Q8ND07 529 aa15.54■□□□□ 0.08
LIME1-209ENST00000494776 PHC3Q8NDX5 983 aa15.54■□□□□ 0.08
LIME1-209ENST00000494776 ACVR1CQ8NER5 493 aa15.54■□□□□ 0.08
LIME1-209ENST00000494776 GABPB2Q8TAK5 448 aaPredicted RBP15.54■□□□□ 0.08
LIME1-209ENST00000494776 CALML6Q8TD86 181 aa15.54■□□□□ 0.08
LIME1-209ENST00000494776 ASZ1Q8WWH4 475 aa15.54■□□□□ 0.08
LIME1-209ENST00000494776 NAF1Q96HR8 494 aaKnown RBP15.54■□□□□ 0.08
LIME1-209ENST00000494776 MVB12BQ9H7P6 319 aa15.54■□□□□ 0.08
LIME1-209ENST00000494776 WDR70Q9NW82 654 aa15.54■□□□□ 0.08
LIME1-209ENST00000494776 PDP2Q9P2J9 529 aa15.54■□□□□ 0.08
LIME1-209ENST00000494776 SLC24A2Q9UI40 661 aa15.54■□□□□ 0.08
LIME1-209ENST00000494776 ASF1AQ9Y294 204 aa15.54■□□□□ 0.08
LIME1-209ENST00000494776 CRYL1Q9Y2S2 319 aa15.54■□□□□ 0.08
LIME1-209ENST00000494776 SNX24Q9Y343 169 aa15.54■□□□□ 0.08
LIME1-209ENST00000494776 MN1Q10571 1320 aaPredicted RBP15.53■□□□□ 0.08
LIME1-209ENST00000494776 ZCWPW2A0A1B0GU75 182 aa15.53■□□□□ 0.08
LIME1-209ENST00000494776 SLC5A10A0PJK1 596 aa15.53■□□□□ 0.08
LIME1-209ENST00000494776 OR6C74A6NCV1 312 aa15.53■□□□□ 0.08
LIME1-209ENST00000494776 EFCAB7A8K855 629 aa15.53■□□□□ 0.08
LIME1-209ENST00000494776 CDRT15L2A8MXV6 281 aa15.53■□□□□ 0.08
LIME1-209ENST00000494776 KPNA5O15131 536 aa15.53■□□□□ 0.08
LIME1-209ENST00000494776 BANF1O75531 89 aa15.53■□□□□ 0.08
LIME1-209ENST00000494776 SEC31AO94979 1220 aaKnown RBP15.53■□□□□ 0.08
LIME1-209ENST00000494776 TTC4O95801 387 aa15.53■□□□□ 0.08
LIME1-209ENST00000494776 CCL4P13236 92 aa15.53■□□□□ 0.08
LIME1-209ENST00000494776 RPS3P23396 243 aaKnown RBP eCLIP15.53■□□□□ 0.082e-11■■□□□ 11.8
LIME1-209ENST00000494776 CCR7P32248 378 aa15.53■□□□□ 0.08
LIME1-209ENST00000494776 PRKAA1Q13131 559 aa15.53■□□□□ 0.08
LIME1-209ENST00000494776 PRKG2Q13237 762 aa15.53■□□□□ 0.08
LIME1-209ENST00000494776 TYSND1Q2T9J0 566 aa15.53■□□□□ 0.08
LIME1-209ENST00000494776 HIBCHQ6NVY1 386 aaPredicted RBP15.53■□□□□ 0.08
LIME1-209ENST00000494776 FAM92BQ6ZTR7 304 aa15.53■□□□□ 0.08
LIME1-209ENST00000494776 OTOAQ7RTW8 1153 aa15.53■□□□□ 0.08
LIME1-209ENST00000494776 ARHGAP22Q7Z5H3 698 aa15.53■□□□□ 0.08
LIME1-209ENST00000494776 CILP2Q8IUL8 1156 aa15.53■□□□□ 0.08
LIME1-209ENST00000494776 AGGF1Q8N302 714 aaeCLIP15.53■□□□□ 0.08
LIME1-209ENST00000494776 ZNF248Q8NDW4 579 aa15.53■□□□□ 0.08
LIME1-209ENST00000494776 OR4E2Q8NGC2 313 aa15.53■□□□□ 0.08
LIME1-209ENST00000494776 SNIP1Q8TAD8 396 aaKnown RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms