RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 ACVR1CQ8NER5 493 aa11.59□□□□□ -0.55
HMGN1-213ENST00000482192 ACTRT1Q8TDG2 376 aa11.59□□□□□ -0.55
HMGN1-213ENST00000482192 JPH3Q8WXH2 748 aaPredicted RBP11.59□□□□□ -0.55
HMGN1-213ENST00000482192 KLHL6Q8WZ60 621 aa11.59□□□□□ -0.55
HMGN1-213ENST00000482192 ELMO1Q92556 727 aa11.59□□□□□ -0.55
HMGN1-213ENST00000482192 UBXN4Q92575 508 aa11.59□□□□□ -0.55
HMGN1-213ENST00000482192 NKD1Q969G9 470 aa11.59□□□□□ -0.55
HMGN1-213ENST00000482192 OSBPL9Q96SU4 736 aa11.59□□□□□ -0.55
HMGN1-213ENST00000482192 CD180Q99467 661 aa11.59□□□□□ -0.55
HMGN1-213ENST00000482192 AP1M1Q9BXS5 423 aa11.59□□□□□ -0.55
HMGN1-213ENST00000482192 TREX1Q9NSU2 369 aa11.59□□□□□ -0.55
HMGN1-213ENST00000482192 HRASLS2Q9NWW9 162 aa11.59□□□□□ -0.55
HMGN1-213ENST00000482192 TRMT1Q9NXH9 659 aaKnown RBP11.59□□□□□ -0.55
HMGN1-213ENST00000482192 ANAPC5Q9UJX4 755 aa11.59□□□□□ -0.55
HMGN1-213ENST00000482192 PRSS21Q9Y6M0 314 aa11.59□□□□□ -0.55
HMGN1-213ENST00000482192 CHD6Q8TD26 2715 aa11.59□□□□□ -0.55
HMGN1-213ENST00000482192 ITPR1Q14643 2758 aa11.58□□□□□ -0.56
HMGN1-213ENST00000482192 GOLGA6L10A0A0M3HER8 536 aa11.58□□□□□ -0.56
HMGN1-213ENST00000482192 TLCD2A6NGC4 264 aa11.58□□□□□ -0.56
HMGN1-213ENST00000482192 ERVH48-1M5A8F1 160 aa11.58□□□□□ -0.56
HMGN1-213ENST00000482192 CES2O00748 559 aa11.58□□□□□ -0.56
HMGN1-213ENST00000482192 EFSO43281 561 aa11.58□□□□□ -0.56
HMGN1-213ENST00000482192 OR1I1O60431 355 aa11.58□□□□□ -0.56
HMGN1-213ENST00000482192 KRT14P02533 472 aa11.58□□□□□ -0.56
HMGN1-213ENST00000482192 NELFEP18615 380 aaKnown RBP11.58□□□□□ -0.56
HMGN1-213ENST00000482192 PDHA2P29803 388 aa11.58□□□□□ -0.56
HMGN1-213ENST00000482192 MAGEA6P43360 314 aa11.58□□□□□ -0.56
HMGN1-213ENST00000482192 PREPP48147 710 aa11.58□□□□□ -0.56
HMGN1-213ENST00000482192 TTPAP49638 278 aa11.58□□□□□ -0.56
HMGN1-213ENST00000482192 VPS41P49754 854 aa11.58□□□□□ -0.56
HMGN1-213ENST00000482192 PPP1CAP62136 330 aa11.58□□□□□ -0.56
HMGN1-213ENST00000482192 CRADDP78560 199 aa11.58□□□□□ -0.56
HMGN1-213ENST00000482192 PLOD1Q02809 727 aaPredicted RBP11.58□□□□□ -0.56
HMGN1-213ENST00000482192 KCNJ11Q14654 390 aa11.58□□□□□ -0.56
HMGN1-213ENST00000482192 SYTL3Q4VX76 610 aa11.58□□□□□ -0.56
HMGN1-213ENST00000482192 ARMC3Q5W041 872 aa11.58□□□□□ -0.56
HMGN1-213ENST00000482192 CCDC137Q6PK04 289 aaKnown RBP11.58□□□□□ -0.56
HMGN1-213ENST00000482192 VASH2Q86V25 355 aa11.58□□□□□ -0.56
HMGN1-213ENST00000482192 KMT5CQ86Y97 462 aa11.58□□□□□ -0.56
HMGN1-213ENST00000482192 NLGN4XQ8N0W4 816 aa11.58□□□□□ -0.56
HMGN1-213ENST00000482192 CARFQ8N187 725 aa11.58□□□□□ -0.56
HMGN1-213ENST00000482192 MPP5Q8N3R9 675 aa11.58□□□□□ -0.56
HMGN1-213ENST00000482192 IL22RA1Q8N6P7 574 aa11.58□□□□□ -0.56
HMGN1-213ENST00000482192 ZSCAN1Q8NBB4 408 aa11.58□□□□□ -0.56
HMGN1-213ENST00000482192 LSM14AQ8ND56 463 aaKnown RBP11.58□□□□□ -0.56
HMGN1-213ENST00000482192 NLGN4YQ8NFZ3 816 aaPredicted RBP11.58□□□□□ -0.56
HMGN1-213ENST00000482192 COG1Q8WTW3 980 aa11.58□□□□□ -0.56
HMGN1-213ENST00000482192 LCN9Q8WX39 176 aa11.58□□□□□ -0.56
HMGN1-213ENST00000482192 SLC41A2Q96JW4 573 aa11.58□□□□□ -0.56
HMGN1-213ENST00000482192 BBC3Q96PG8 261 aaPredicted RBP11.58□□□□□ -0.56
HMGN1-213ENST00000482192 OR6C1Q96RD1 312 aa11.58□□□□□ -0.56
HMGN1-213ENST00000482192 FERD3LQ96RJ6 166 aa11.58□□□□□ -0.56
HMGN1-213ENST00000482192 TSSK1BQ9BXA7 367 aa11.58□□□□□ -0.56
HMGN1-213ENST00000482192 MVB12BQ9H7P6 319 aa11.58□□□□□ -0.56
HMGN1-213ENST00000482192 APMAPQ9HDC9 416 aa11.58□□□□□ -0.56
HMGN1-213ENST00000482192 CATSPERZQ9NTU4 200 aa11.58□□□□□ -0.56
HMGN1-213ENST00000482192 SEMA5BQ9P283 1151 aa11.58□□□□□ -0.56
HMGN1-213ENST00000482192 PILRAQ9UKJ1 303 aa11.58□□□□□ -0.56
HMGN1-213ENST00000482192 SNX12Q9UMY4 172 aa11.58□□□□□ -0.56
HMGN1-213ENST00000482192 CFAP47Q6ZTR5 3102 aa11.58□□□□□ -0.56
HMGN1-213ENST00000482192 FAM208BQ5VWN6 2430 aa11.57□□□□□ -0.56
HMGN1-213ENST00000482192 UBA6A0AVT1 1052 aaPredicted RBP11.57□□□□□ -0.56
HMGN1-213ENST00000482192 OR6C74A6NCV1 312 aa11.57□□□□□ -0.56
HMGN1-213ENST00000482192 EIF4E1BA6NMX2 242 aaKnown RBP11.57□□□□□ -0.56
HMGN1-213ENST00000482192 TK2O00142 265 aa11.57□□□□□ -0.56
HMGN1-213ENST00000482192 MATN2O00339 956 aa11.57□□□□□ -0.56
HMGN1-213ENST00000482192 CD3EAPO15446 510 aaKnown RBP11.57□□□□□ -0.56
HMGN1-213ENST00000482192 RAD1O60671 282 aa11.57□□□□□ -0.56
HMGN1-213ENST00000482192 PHF2O75151 1096 aa11.57□□□□□ -0.56
HMGN1-213ENST00000482192 STK17BO94768 372 aa11.57□□□□□ -0.56
HMGN1-213ENST00000482192 MGAT1P26572 445 aa11.57□□□□□ -0.56
HMGN1-213ENST00000482192 MAP4P27816 1152 aaKnown RBP11.57□□□□□ -0.56
HMGN1-213ENST00000482192 COILP38432 576 aaPredicted RBP11.57□□□□□ -0.56
HMGN1-213ENST00000482192 ARL4DP49703 201 aa11.57□□□□□ -0.56
HMGN1-213ENST00000482192 SH3BP2P78314 561 aa11.57□□□□□ -0.56
HMGN1-213ENST00000482192 PRKAA1Q13131 559 aa11.57□□□□□ -0.56
HMGN1-213ENST00000482192 SRSF6Q13247 344 aaKnown RBP11.57□□□□□ -0.56
HMGN1-213ENST00000482192 BOP1Q14137 746 aaKnown RBP11.57□□□□□ -0.56
HMGN1-213ENST00000482192 SEMA3AQ14563 771 aa11.57□□□□□ -0.56
HMGN1-213ENST00000482192 CACNA2D3Q8IZS8 1091 aa11.57□□□□□ -0.56
HMGN1-213ENST00000482192 OR4E2Q8NGC2 313 aa11.57□□□□□ -0.56
HMGN1-213ENST00000482192 GRK7Q8WTQ7 553 aa11.57□□□□□ -0.56
HMGN1-213ENST00000482192 TFGQ92734 400 aaPredicted RBP11.57□□□□□ -0.56
HMGN1-213ENST00000482192 PDLIM2Q96JY6 352 aa11.57□□□□□ -0.56
HMGN1-213ENST00000482192 KIFC1Q9BW19 673 aa11.57□□□□□ -0.56
HMGN1-213ENST00000482192 ULBP3Q9BZM4 244 aa11.57□□□□□ -0.56
HMGN1-213ENST00000482192 SPRY4Q9C004 299 aa11.57□□□□□ -0.56
HMGN1-213ENST00000482192 TRIT1Q9H3H1 467 aaKnown RBP11.57□□□□□ -0.56
HMGN1-213ENST00000482192 SRMSQ9H3Y6 488 aa11.57□□□□□ -0.56
HMGN1-213ENST00000482192 TFB2MQ9H5Q4 396 aaKnown RBP11.57□□□□□ -0.56
HMGN1-213ENST00000482192 MRM3Q9HC36 420 aaKnown RBP11.57□□□□□ -0.56
HMGN1-213ENST00000482192 SYBUQ9NX95 663 aa11.57□□□□□ -0.56
HMGN1-213ENST00000482192 TMEM184BQ9Y519 407 aaPredicted RBP11.57□□□□□ -0.56
HMGN1-213ENST00000482192 PCDHGA4Q9Y5G9 962 aa11.57□□□□□ -0.56
HMGN1-213ENST00000482192 DSPP15924 2871 aaKnown RBP11.56□□□□□ -0.56
HMGN1-213ENST00000482192 IGHV5-51A0A0C4DH38 117 aa11.56□□□□□ -0.56
HMGN1-213ENST00000482192 TCRBV7S3A2A0A539 114 aa11.56□□□□□ -0.56
HMGN1-213ENST00000482192 SLC5A10A0PJK1 596 aa11.56□□□□□ -0.56
HMGN1-213ENST00000482192 FGF5P12034 268 aa11.56□□□□□ -0.56
HMGN1-213ENST00000482192 MLNP12872 115 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms