RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 SLC16A1P53985 500 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 GSCP56915 257 aaPredicted RBP4.55□□□□□ -1.68
CCNL1-215ENST00000474539 DSC1Q08554 894 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 SCAPQ12770 1279 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 FASTKQ14296 549 aaKnown RBP4.55□□□□□ -1.68
CCNL1-215ENST00000474539 SGCBQ16585 318 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 MOGQ16653 247 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 DUSP6Q16828 381 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 TRMT5Q32P41 509 aaKnown RBP4.55□□□□□ -1.68
CCNL1-215ENST00000474539 SLC44A4Q53GD3 710 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 MZT2AQ6P582 158 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 RHBDF2Q6PJF5 856 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 RAD9BQ6WBX8 426 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 MACC1Q6ZN28 852 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 PIM3Q86V86 326 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 JAZF1Q86VZ6 243 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 CBARPQ8N350 705 aaPredicted RBP4.55□□□□□ -1.68
CCNL1-215ENST00000474539 ZSCAN4Q8NAM6 433 aaPredicted RBP4.55□□□□□ -1.68
CCNL1-215ENST00000474539 SLC43A3Q8NBI5 491 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 FAM111AQ96PZ2 611 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 KXD1Q9BQD3 176 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 APOL2Q9BQE5 337 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 TBL1XR1Q9BZK7 514 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 MYLK2Q9H1R3 596 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 ACSS3Q9H6R3 686 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 CYP4F12Q9HCS2 524 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 CCNB1IP1Q9NPC3 277 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 CHST7Q9NS84 486 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 ARL8BQ9NVJ2 186 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 EURLQ9NYK6 297 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 GSTK1Q9Y2Q3 226 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 ZDHHC9Q9Y397 364 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 MAU2Q9Y6X3 613 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 TMEM150BA6NC51 233 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 ZNF840PA6NDX5 716 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 CHST10O43529 356 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 LYNP07948 512 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 JUNDP17535 347 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 FOLR3P41439 243 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 GRK6P43250 576 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 CLCN7P51798 805 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 SLC7A2P52569 658 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 MTAPQ13126 283 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 SEMA3AQ14563 771 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 SDHAF4Q5VUM1 108 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 ZNF621Q6ZSS3 439 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 PLPP6Q8IY26 295 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 ST13P5Q8NFI4 369 aaPredicted RBP4.55□□□□□ -1.68
CCNL1-215ENST00000474539 PSMA8Q8TAA3 256 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 PTCD3Q96EY7 689 aaKnown RBP4.55□□□□□ -1.68
CCNL1-215ENST00000474539 SEC16BQ96JE7 1060 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 AARSD1Q9BTE6 412 aaKnown RBP4.55□□□□□ -1.68
CCNL1-215ENST00000474539 CPEB1Q9BZB8 566 aaKnown RBP4.55□□□□□ -1.68
CCNL1-215ENST00000474539 DKK3Q9UBP4 350 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 CKLFQ9UBR5 152 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 GJD2Q9UKL4 321 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 FBXW2Q9UKT8 454 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 CYP8B1Q9UNU6 501 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 ARFGEF2Q9Y6D5 1785 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 TCP11X1B4DZS4 312 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 NR5A2O00482 541 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 TGM5O43548 720 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 DCXO43602 365 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 SERPINA3P01011 423 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 LDLRP01130 860 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 LPLP06858 475 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 CHN1P15882 459 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 SP100P23497 879 aaPredicted RBP4.54□□□□□ -1.68
CCNL1-215ENST00000474539 HOXD12P35452 270 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 TNK2Q07912 1038 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 CBX3Q13185 183 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 TCEAL1Q15170 157 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 SLC36A3Q495N2 470 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 ZNF311Q5JNZ3 666 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 FAM91A1Q658Y4 838 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 RNF43Q68DV7 783 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 TRPM8Q7Z2W7 1104 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 ZNF598Q86UK7 904 aaKnown RBP4.54□□□□□ -1.68
CCNL1-215ENST00000474539 PARGQ86W56 976 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 COMMD2Q86X83 199 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 CCDC33Q8N5R6 958 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 SLC5A8Q8N695 610 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 RFWD2Q8NHY2 731 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 TEX47Q8TBZ9 253 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 PGAP3Q96FM1 320 aaPredicted RBP4.54□□□□□ -1.68
CCNL1-215ENST00000474539 ARL5BQ96KC2 179 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 TIMM29Q9BSF4 260 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 CDADC1Q9BWV3 514 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 RHOBTB2Q9BYZ6 727 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.54□□□□□ -1.68
CCNL1-215ENST00000474539 SDCBP2Q9H190 292 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 LRTM1Q9HBL6 345 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 TRIM39Q9HCM9 518 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 MKKSQ9NPJ1 570 aaPredicted RBP4.54□□□□□ -1.68
CCNL1-215ENST00000474539 SACM1LQ9NTJ5 587 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 DMGDHQ9UI17 866 aaKnown RBP4.54□□□□□ -1.68
CCNL1-215ENST00000474539 TMEM5Q9Y2B1 443 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 WNT6Q9Y6F9 365 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 STON1Q9Y6Q2 735 aa4.54□□□□□ -1.68
CCNL1-215ENST00000474539 ZNF726A6NNF4 738 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms