RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 POLE2P56282 527 aa18.08■□□□□ 0.48
COL7A1-209ENST00000474432 CACNG1Q06432 222 aa18.08■□□□□ 0.48
COL7A1-209ENST00000474432 SEPT6Q14141 434 aa18.08■□□□□ 0.48
COL7A1-209ENST00000474432 CCDC38Q502W7 563 aa18.08■□□□□ 0.48
COL7A1-209ENST00000474432 DNTTIP2Q5QJE6 756 aaKnown RBP18.08■□□□□ 0.48
COL7A1-209ENST00000474432 PWWP2BQ6NUJ5 590 aa18.08■□□□□ 0.48
COL7A1-209ENST00000474432 PPP1R3BQ86XI6 285 aa18.08■□□□□ 0.48
COL7A1-209ENST00000474432 KMT5CQ86Y97 462 aa18.08■□□□□ 0.48
COL7A1-209ENST00000474432 RASGRP3Q8IV61 690 aa18.08■□□□□ 0.48
COL7A1-209ENST00000474432 SIDT2Q8NBJ9 832 aaKnown RBP18.08■□□□□ 0.48
COL7A1-209ENST00000474432 OR13J1Q8NGT2 312 aa18.08■□□□□ 0.48
COL7A1-209ENST00000474432 C1orf54Q8WWF1 131 aa18.08■□□□□ 0.48
COL7A1-209ENST00000474432 STARD8Q92502 1023 aa18.08■□□□□ 0.48
COL7A1-209ENST00000474432 EFHD1Q9BUP0 239 aa18.08■□□□□ 0.48
COL7A1-209ENST00000474432 ADNPQ9H2P0 1102 aa18.08■□□□□ 0.48
COL7A1-209ENST00000474432 CROTQ9UKG9 612 aa18.08■□□□□ 0.48
COL7A1-209ENST00000474432 GUCA1BQ9UMX6 200 aa18.08■□□□□ 0.48
COL7A1-209ENST00000474432 SETXQ7Z333 2677 aaKnown RBP18.07■□□□□ 0.48
COL7A1-209ENST00000474432 CCDC162PA2VCL2 907 aa18.07■□□□□ 0.48
COL7A1-209ENST00000474432 CFAP99D6REC4 459 aa18.07■□□□□ 0.48
COL7A1-209ENST00000474432 FURINP09958 794 aa18.07■□□□□ 0.48
COL7A1-209ENST00000474432 SFTPCP11686 197 aa18.07■□□□□ 0.48
COL7A1-209ENST00000474432 ETS1P14921 441 aa18.07■□□□□ 0.48
COL7A1-209ENST00000474432 FOXN2P32314 431 aa18.07■□□□□ 0.48
COL7A1-209ENST00000474432 TUBB3Q13509 450 aa18.07■□□□□ 0.48
COL7A1-209ENST00000474432 MEI1Q5TIA1 1274 aa18.07■□□□□ 0.48
COL7A1-209ENST00000474432 TAS2R42Q7RTR8 314 aa18.07■□□□□ 0.48
COL7A1-209ENST00000474432 OOSP2Q86WS3 158 aa18.07■□□□□ 0.48
COL7A1-209ENST00000474432 PHC3Q8NDX5 983 aa18.07■□□□□ 0.48
COL7A1-209ENST00000474432 OR4E2Q8NGC2 313 aa18.07■□□□□ 0.48
COL7A1-209ENST00000474432 LRRC45Q96CN5 670 aa18.07■□□□□ 0.48
COL7A1-209ENST00000474432 CATSPER2Q96P56 530 aa18.07■□□□□ 0.48
COL7A1-209ENST00000474432 FCRL4Q96PJ5 515 aa18.07■□□□□ 0.48
COL7A1-209ENST00000474432 FGF21Q9NSA1 209 aa18.07■□□□□ 0.48
COL7A1-209ENST00000474432 SLC2A6Q9UGQ3 507 aa18.07■□□□□ 0.48
COL7A1-209ENST00000474432 FLNBO75369 2602 aaKnown RBP18.07■□□□□ 0.48
COL7A1-209ENST00000474432 BTN3A3O00478 584 aa18.06■□□□□ 0.48
COL7A1-209ENST00000474432 SLC28A2O43868 658 aa18.06■□□□□ 0.48
COL7A1-209ENST00000474432 POLR2CP19387 275 aaPredicted RBP18.06■□□□□ 0.48
COL7A1-209ENST00000474432 DLSTP36957 453 aa18.06■□□□□ 0.48
COL7A1-209ENST00000474432 PREPP48147 710 aa18.06■□□□□ 0.48
COL7A1-209ENST00000474432 CD151P48509 253 aa18.06■□□□□ 0.48
COL7A1-209ENST00000474432 HSD11B2P80365 405 aa18.06■□□□□ 0.48
COL7A1-209ENST00000474432 GSE1Q14687 1217 aa18.06■□□□□ 0.48
COL7A1-209ENST00000474432 LINC00523Q86TU6 105 aa18.06■□□□□ 0.48
COL7A1-209ENST00000474432 ACVR1CQ8NER5 493 aa18.06■□□□□ 0.48
COL7A1-209ENST00000474432 ZNF501Q96CX3 271 aaPredicted RBP18.06■□□□□ 0.48
COL7A1-209ENST00000474432 ZNF778Q96MU6 729 aa18.06■□□□□ 0.48
COL7A1-209ENST00000474432 FRMD8P1Q9BZ68 369 aaPredicted RBP18.06■□□□□ 0.48
COL7A1-209ENST00000474432 SLC25A18Q9H1K4 315 aa18.06■□□□□ 0.48
COL7A1-209ENST00000474432 LNPEPQ9UIQ6 1025 aa18.06■□□□□ 0.48
COL7A1-209ENST00000474432 POMT2Q9UKY4 750 aa18.06■□□□□ 0.48
COL7A1-209ENST00000474432 RARRES3Q9UL19 164 aa18.06■□□□□ 0.48
COL7A1-209ENST00000474432 COLEC10Q9Y6Z7 277 aa18.06■□□□□ 0.48
COL7A1-209ENST00000474432 UBA6A0AVT1 1052 aaPredicted RBP18.05■□□□□ 0.48
COL7A1-209ENST00000474432 ERI2A8K979 691 aaKnown RBP18.05■□□□□ 0.48
COL7A1-209ENST00000474432 SUV39H1O43463 412 aa18.05■□□□□ 0.48
COL7A1-209ENST00000474432 ZBTB11O95625 1053 aaPredicted RBP18.05■□□□□ 0.48
COL7A1-209ENST00000474432 TCN2P20062 427 aa18.05■□□□□ 0.48
COL7A1-209ENST00000474432 MSNP26038 577 aaKnown RBP18.05■□□□□ 0.48
COL7A1-209ENST00000474432 NDUFS1P28331 727 aa18.05■□□□□ 0.48
COL7A1-209ENST00000474432 CCR10P46092 362 aa18.05■□□□□ 0.48
COL7A1-209ENST00000474432 ACY1Q03154 408 aa18.05■□□□□ 0.48
COL7A1-209ENST00000474432 ACVR1Q04771 509 aa18.05■□□□□ 0.48
COL7A1-209ENST00000474432 CDH17Q12864 832 aa18.05■□□□□ 0.48
COL7A1-209ENST00000474432 RPA4Q13156 261 aa18.05■□□□□ 0.48
COL7A1-209ENST00000474432 KCNAB2Q13303 367 aa18.05■□□□□ 0.48
COL7A1-209ENST00000474432 SEMA5AQ13591 1074 aa18.05■□□□□ 0.48
COL7A1-209ENST00000474432 SNX1Q13596 522 aa18.05■□□□□ 0.48
COL7A1-209ENST00000474432 LAMB3Q13751 1172 aa18.05■□□□□ 0.48
COL7A1-209ENST00000474432 BOP1Q14137 746 aaKnown RBP18.05■□□□□ 0.48
COL7A1-209ENST00000474432 ITIH4Q14624 930 aa18.05■□□□□ 0.48
COL7A1-209ENST00000474432 GPR19Q15760 415 aa18.05■□□□□ 0.48
COL7A1-209ENST00000474432 SEL1L2Q5TEA6 688 aa18.05■□□□□ 0.48
COL7A1-209ENST00000474432 ZNF534Q76KX8 674 aa18.05■□□□□ 0.48
COL7A1-209ENST00000474432 CARFQ8N187 725 aa18.05■□□□□ 0.48
COL7A1-209ENST00000474432 CT55Q8WUE5 264 aa18.05■□□□□ 0.48
COL7A1-209ENST00000474432 STAMBPL1Q96FJ0 436 aa18.05■□□□□ 0.48
COL7A1-209ENST00000474432 FERD3LQ96RJ6 166 aa18.05■□□□□ 0.48
COL7A1-209ENST00000474432 RUFY1Q96T51 708 aa18.05■□□□□ 0.48
COL7A1-209ENST00000474432 TSGA10Q9BZW7 698 aa18.05■□□□□ 0.48
COL7A1-209ENST00000474432 TWSG1Q9GZX9 223 aa18.05■□□□□ 0.48
COL7A1-209ENST00000474432 TFB2MQ9H5Q4 396 aaKnown RBP18.05■□□□□ 0.48
COL7A1-209ENST00000474432 PDE7BQ9NP56 450 aa18.05■□□□□ 0.48
COL7A1-209ENST00000474432 LHX9Q9NQ69 397 aa18.05■□□□□ 0.48
COL7A1-209ENST00000474432 CASS4Q9NQ75 786 aa18.05■□□□□ 0.48
COL7A1-209ENST00000474432 SMARCAL1Q9NZC9 954 aa18.05■□□□□ 0.48
COL7A1-209ENST00000474432 TUBD1Q9UJT1 453 aa18.05■□□□□ 0.48
COL7A1-209ENST00000474432 PADI1Q9ULC6 663 aa18.05■□□□□ 0.48
COL7A1-209ENST00000474432 BTRCQ9Y297 605 aa18.05■□□□□ 0.48
COL7A1-209ENST00000474432 PCDHGA6Q9Y5G7 932 aa18.05■□□□□ 0.48
COL7A1-209ENST00000474432 HEBP2Q9Y5Z4 205 aa18.05■□□□□ 0.48
COL7A1-209ENST00000474432 ASH1LQ9NR48 2969 aaKnown RBP18.05■□□□□ 0.48
COL7A1-209ENST00000474432 BTN3A1O00481 513 aa18.04■□□□□ 0.48
COL7A1-209ENST00000474432 KRT86O43790 486 aa18.04■□□□□ 0.48
COL7A1-209ENST00000474432 AP2A2O94973 939 aa18.04■□□□□ 0.48
COL7A1-209ENST00000474432 NTRK1P04629 796 aa18.04■□□□□ 0.48
COL7A1-209ENST00000474432 ZSCAN5DPP0CG00 497 aa18.04■□□□□ 0.48
COL7A1-209ENST00000474432 TPBGLP0DKB5 382 aa18.04■□□□□ 0.48
COL7A1-209ENST00000474432 ACADLP28330 430 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms