RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 SURF6O75683 361 aaKnown RBP5.23□□□□□ -1.57
CCDC39-202ENST00000471307 TUBBP07437 444 aa5.23□□□□□ -1.57
CCDC39-202ENST00000471307 CLDN20P56880 219 aa5.23□□□□□ -1.57
CCDC39-202ENST00000471307 RPL7AP62424 266 aaKnown RBP5.23□□□□□ -1.57
CCDC39-202ENST00000471307 TUBB4BP68371 445 aa5.23□□□□□ -1.57
CCDC39-202ENST00000471307 RPL24P83731 157 aaKnown RBP5.23□□□□□ -1.57
CCDC39-202ENST00000471307 ZBED6P86452 979 aa5.23□□□□□ -1.57
CCDC39-202ENST00000471307 NUCB1Q02818 461 aa5.23□□□□□ -1.57
CCDC39-202ENST00000471307 G3BP1Q13283 466 aaKnown RBP eCLIP5.23□□□□□ -1.57
CCDC39-202ENST00000471307 CCDC57Q2TAC2 916 aa5.23□□□□□ -1.57
CCDC39-202ENST00000471307 DPCR1Q3MIW9 517 aa5.23□□□□□ -1.57
CCDC39-202ENST00000471307 PAPD4Q6PIY7 484 aaKnown RBP5.23□□□□□ -1.57
CCDC39-202ENST00000471307 TSSK4Q6SA08 328 aa5.23□□□□□ -1.57
CCDC39-202ENST00000471307 ERC1Q8IUD2 1116 aa5.23□□□□□ -1.57
CCDC39-202ENST00000471307 TEX19Q8NA77 164 aa5.23□□□□□ -1.57
CCDC39-202ENST00000471307 OR10V1Q8NGI7 309 aa5.23□□□□□ -1.57
CCDC39-202ENST00000471307 SLC38A5Q8WUX1 472 aa5.23□□□□□ -1.57
CCDC39-202ENST00000471307 TBATAQ96M53 351 aa5.23□□□□□ -1.57
CCDC39-202ENST00000471307 BARHL1Q9BZE3 327 aa5.23□□□□□ -1.57
CCDC39-202ENST00000471307 TMX4Q9H1E5 349 aaPredicted RBP5.23□□□□□ -1.57
CCDC39-202ENST00000471307 ZHX3Q9H4I2 956 aa5.23□□□□□ -1.57
CCDC39-202ENST00000471307 MAGIXQ9H6Y5 334 aa5.23□□□□□ -1.57
CCDC39-202ENST00000471307 OR14J1Q9UGF5 321 aa5.23□□□□□ -1.57
CCDC39-202ENST00000471307 MAU2Q9Y6X3 613 aa5.23□□□□□ -1.57
CCDC39-202ENST00000471307 CARMIL3Q8ND23 1372 aa5.23□□□□□ -1.57
CCDC39-202ENST00000471307 SCN7AQ01118 1682 aa5.23□□□□□ -1.57
CCDC39-202ENST00000471307 C4AP0C0L4 1744 aa5.23□□□□□ -1.57
CCDC39-202ENST00000471307 QSER1Q2KHR3 1735 aa5.23□□□□□ -1.57
CCDC39-202ENST00000471307 ANKRD18BA2A2Z9 1011 aa5.22□□□□□ -1.57
CCDC39-202ENST00000471307 FAM90A26D6RGX4 464 aa5.22□□□□□ -1.57
CCDC39-202ENST00000471307 PCDH7O60245 1069 aa5.22□□□□□ -1.57
CCDC39-202ENST00000471307 PRKNO60260 465 aaPredicted RBP5.22□□□□□ -1.57
CCDC39-202ENST00000471307 JRKO75564 520 aa5.22□□□□□ -1.57
CCDC39-202ENST00000471307 APOHP02749 345 aaPredicted RBP5.22□□□□□ -1.57
CCDC39-202ENST00000471307 KRT10P13645 584 aa5.22□□□□□ -1.57
CCDC39-202ENST00000471307 MAN1A1P33908 653 aa5.22□□□□□ -1.57
CCDC39-202ENST00000471307 TUBP50607 506 aa5.22□□□□□ -1.57
CCDC39-202ENST00000471307 NR0B1P51843 470 aaKnown RBP5.22□□□□□ -1.57
CCDC39-202ENST00000471307 MLLT10P55197 1068 aa5.22□□□□□ -1.57
CCDC39-202ENST00000471307 ERVK11-1P61568 191 aa5.22□□□□□ -1.57
CCDC39-202ENST00000471307 TBX2Q13207 712 aaPredicted RBP5.22□□□□□ -1.57
CCDC39-202ENST00000471307 CCDC152Q4G0S7 254 aa5.22□□□□□ -1.57
CCDC39-202ENST00000471307 ACAD10Q6JQN1 1059 aa5.22□□□□□ -1.57
CCDC39-202ENST00000471307 MAP7D3Q8IWC1 876 aa5.22□□□□□ -1.57
CCDC39-202ENST00000471307 OR52I2Q8NH67 350 aa5.22□□□□□ -1.57
CCDC39-202ENST00000471307 SMARCE1Q969G3 411 aa5.22□□□□□ -1.57
CCDC39-202ENST00000471307 LGALS12Q96DT0 336 aa5.22□□□□□ -1.57
CCDC39-202ENST00000471307 LINGO1Q96FE5 620 aa5.22□□□□□ -1.57
CCDC39-202ENST00000471307 LRRCC1Q9C099 1032 aa5.22□□□□□ -1.57
CCDC39-202ENST00000471307 JMJD4Q9H9V9 463 aa5.22□□□□□ -1.57
CCDC39-202ENST00000471307 SLC28A3Q9HAS3 691 aa5.22□□□□□ -1.57
CCDC39-202ENST00000471307 SCRT2Q9NQ03 307 aa5.22□□□□□ -1.57
CCDC39-202ENST00000471307 TCP11L1Q9NUJ3 509 aa5.22□□□□□ -1.57
CCDC39-202ENST00000471307 MAP3K20Q9NYL2 800 aaKnown RBP5.22□□□□□ -1.57
CCDC39-202ENST00000471307 MKLN1Q9UL63 735 aa5.22□□□□□ -1.57
CCDC39-202ENST00000471307 MYH3P11055 1940 aa5.22□□□□□ -1.57
CCDC39-202ENST00000471307 TUBGCP6Q96RT7 1819 aa5.21□□□□□ -1.58
CCDC39-202ENST00000471307 RTL9Q8NET4 1388 aa5.21□□□□□ -1.58
CCDC39-202ENST00000471307 ANKRD28O15084 1053 aa5.21□□□□□ -1.58
CCDC39-202ENST00000471307 EIF3DO15371 548 aaKnown RBP eCLIP5.21□□□□□ -1.58
CCDC39-202ENST00000471307 BUD23O43709 281 aaKnown RBP5.21□□□□□ -1.58
CCDC39-202ENST00000471307 CIAO1O76071 339 aa5.21□□□□□ -1.58
CCDC39-202ENST00000471307 PDE9AO76083 593 aa5.21□□□□□ -1.58
CCDC39-202ENST00000471307 MMP10P09238 476 aa5.21□□□□□ -1.58
CCDC39-202ENST00000471307 UBL4AP11441 157 aa5.21□□□□□ -1.58
CCDC39-202ENST00000471307 DCTP40126 519 aa5.21□□□□□ -1.58
CCDC39-202ENST00000471307 OLR1P78380 273 aa5.21□□□□□ -1.58
CCDC39-202ENST00000471307 PPIGQ13427 754 aaKnown RBP eCLIP5.21□□□□□ -1.58
CCDC39-202ENST00000471307 MAPRE1Q15691 268 aaKnown RBP5.21□□□□□ -1.58
CCDC39-202ENST00000471307 LCN10Q6JVE6 187 aa5.21□□□□□ -1.58
CCDC39-202ENST00000471307 PRR5LQ6MZQ0 368 aa5.21□□□□□ -1.58
CCDC39-202ENST00000471307 CEACAM20Q6UY09 585 aa5.21□□□□□ -1.58
CCDC39-202ENST00000471307 OR14L1PQ8NHC6 308 aa5.21□□□□□ -1.58
CCDC39-202ENST00000471307 SGCDQ92629 289 aa5.21□□□□□ -1.58
CCDC39-202ENST00000471307 ZNF524Q96C55 264 aa5.21□□□□□ -1.58
CCDC39-202ENST00000471307 MMABQ96EY8 250 aaPredicted RBP5.21□□□□□ -1.58
CCDC39-202ENST00000471307 ABHD8Q96I13 439 aa5.21□□□□□ -1.58
CCDC39-202ENST00000471307 UPF2Q9HAU5 1272 aaKnown RBP5.21□□□□□ -1.58
CCDC39-202ENST00000471307 MARCH4Q9P2E8 410 aaPredicted RBP5.21□□□□□ -1.58
CCDC39-202ENST00000471307 PGAP2Q9UHJ9 254 aa5.21□□□□□ -1.58
CCDC39-202ENST00000471307 EXOC6BQ9Y2D4 811 aa5.21□□□□□ -1.58
CCDC39-202ENST00000471307 CRYL1Q9Y2S2 319 aa5.21□□□□□ -1.58
CCDC39-202ENST00000471307 RIC1Q4ADV7 1423 aa5.21□□□□□ -1.58
CCDC39-202ENST00000471307 COL24A1Q17RW2 1714 aa5.2□□□□□ -1.58
CCDC39-202ENST00000471307 NKX2-2O95096 273 aa5.2□□□□□ -1.58
CCDC39-202ENST00000471307 CSF2RAP15509 400 aa5.2□□□□□ -1.58
CCDC39-202ENST00000471307 HSD17B4P51659 736 aa5.2□□□□□ -1.58
CCDC39-202ENST00000471307 FCN2Q15485 313 aa5.2□□□□□ -1.58
CCDC39-202ENST00000471307 CRY2Q49AN0 593 aa5.2□□□□□ -1.58
CCDC39-202ENST00000471307 KRTCAP3Q53RY4 240 aa5.2□□□□□ -1.58
CCDC39-202ENST00000471307 SFMBT2Q5VUG0 894 aa5.2□□□□□ -1.58
CCDC39-202ENST00000471307 ATG9AQ7Z3C6 839 aa5.2□□□□□ -1.58
CCDC39-202ENST00000471307 PCGF5Q86SE9 256 aa5.2□□□□□ -1.58
CCDC39-202ENST00000471307 HEATR4Q86WZ0 1026 aa5.2□□□□□ -1.58
CCDC39-202ENST00000471307 HMGCLL1Q8TB92 370 aa5.2□□□□□ -1.58
CCDC39-202ENST00000471307 ZUFSPQ96AP4 578 aa5.2□□□□□ -1.58
CCDC39-202ENST00000471307 INTS12Q96CB8 462 aaKnown RBP5.2□□□□□ -1.58
CCDC39-202ENST00000471307 ARHGEF26Q96DR7 871 aa5.2□□□□□ -1.58
CCDC39-202ENST00000471307 LRMDAQ9H2I8 198 aa5.2□□□□□ -1.58
CCDC39-202ENST00000471307 TFB2MQ9H5Q4 396 aaKnown RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 225 ms