RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 MED24O75448 989 aa4.5□□□□□ -1.69
USP25-207ENST00000464435 RECQL5O94762 991 aaPredicted RBP4.5□□□□□ -1.69
USP25-207ENST00000464435 BMP10O95393 424 aa4.5□□□□□ -1.69
USP25-207ENST00000464435 ZBTB11O95625 1053 aaPredicted RBP4.5□□□□□ -1.69
USP25-207ENST00000464435 RPN1P04843 607 aaKnown RBP4.5□□□□□ -1.69
USP25-207ENST00000464435 FDPSP14324 419 aaKnown RBP4.5□□□□□ -1.69
USP25-207ENST00000464435 AZGP1P25311 298 aaKnown RBP4.5□□□□□ -1.69
USP25-207ENST00000464435 MT3P25713 68 aa4.5□□□□□ -1.69
USP25-207ENST00000464435 COPB2P35606 906 aa4.5□□□□□ -1.69
USP25-207ENST00000464435 USP8P40818 1118 aa4.5□□□□□ -1.69
USP25-207ENST00000464435 TERF1P54274 439 aa4.5□□□□□ -1.69
USP25-207ENST00000464435 SEC61A1P61619 476 aaKnown RBP4.5□□□□□ -1.69
USP25-207ENST00000464435 TFCP2Q12800 502 aa4.5□□□□□ -1.69
USP25-207ENST00000464435 KIF5AQ12840 1032 aa4.5□□□□□ -1.69
USP25-207ENST00000464435 ZBTB17Q13105 803 aa4.5□□□□□ -1.69
USP25-207ENST00000464435 SNTA1Q13424 505 aa4.5□□□□□ -1.69
USP25-207ENST00000464435 SCARB2Q14108 478 aa4.5□□□□□ -1.69
USP25-207ENST00000464435 HECTD3Q5T447 861 aa4.5□□□□□ -1.69
USP25-207ENST00000464435 GCNT6Q5T4J0 391 aa4.5□□□□□ -1.69
USP25-207ENST00000464435 PPP1R21Q6ZMI0 780 aa4.5□□□□□ -1.69
USP25-207ENST00000464435 FAM114A1Q8IWE2 563 aa4.5□□□□□ -1.69
USP25-207ENST00000464435 CEP57L1Q8IYX8 460 aa4.5□□□□□ -1.69
USP25-207ENST00000464435 SLC4A11Q8NBS3 891 aa4.5□□□□□ -1.69
USP25-207ENST00000464435 CAMKVQ8NCB2 501 aa4.5□□□□□ -1.69
USP25-207ENST00000464435 TMEM255BQ8WV15 326 aa4.5□□□□□ -1.69
USP25-207ENST00000464435 FIG4Q92562 907 aa4.5□□□□□ -1.69
USP25-207ENST00000464435 ARSGQ96EG1 525 aa4.5□□□□□ -1.69
USP25-207ENST00000464435 DOCK7Q96N67 2140 aa4.5□□□□□ -1.69
USP25-207ENST00000464435 ZNF385AQ96PM9 386 aaKnown RBP4.5□□□□□ -1.69
USP25-207ENST00000464435 SLC25A23Q9BV35 468 aa4.5□□□□□ -1.69
USP25-207ENST00000464435 VPS33BQ9H267 617 aa4.5□□□□□ -1.69
USP25-207ENST00000464435 IL17BQ9UHF5 180 aa4.5□□□□□ -1.69
USP25-207ENST00000464435 SLC24A2Q9UI40 661 aa4.5□□□□□ -1.69
USP25-207ENST00000464435 RALYQ9UKM9 306 aaKnown RBP4.5□□□□□ -1.69
USP25-207ENST00000464435 LIPGQ9Y5X9 500 aa4.5□□□□□ -1.69
USP25-207ENST00000464435 TMEM221A6NGB7 291 aa4.49□□□□□ -1.69
USP25-207ENST00000464435 KRT86O43790 486 aa4.49□□□□□ -1.69
USP25-207ENST00000464435 TBCAO75347 108 aaKnown RBP4.49□□□□□ -1.69
USP25-207ENST00000464435 PENKP01210 267 aaPredicted RBP4.49□□□□□ -1.69
USP25-207ENST00000464435 KRT19P08727 400 aa4.49□□□□□ -1.69
USP25-207ENST00000464435 OR52Z1P0C646 297 aa4.49□□□□□ -1.69
USP25-207ENST00000464435 DANCRP0C864 163 aa4.49□□□□□ -1.69
USP25-207ENST00000464435 CDH1P12830 882 aa4.49□□□□□ -1.69
USP25-207ENST00000464435 IFNAR1P17181 557 aa4.49□□□□□ -1.69
USP25-207ENST00000464435 ERCC2P18074 760 aa4.49□□□□□ -1.69
USP25-207ENST00000464435 ACHEP22303 614 aa4.49□□□□□ -1.69
USP25-207ENST00000464435 MMP15P51511 669 aa4.49□□□□□ -1.69
USP25-207ENST00000464435 ACSM1Q08AH1 577 aa4.49□□□□□ -1.69
USP25-207ENST00000464435 HSPB3Q12988 150 aa4.49□□□□□ -1.69
USP25-207ENST00000464435 GTF2H2Q13888 395 aa4.49□□□□□ -1.69
USP25-207ENST00000464435 KRT81Q14533 505 aa4.49□□□□□ -1.69
USP25-207ENST00000464435 NR1D2Q14995 579 aa4.49□□□□□ -1.69
USP25-207ENST00000464435 LCE1EQ5T753 118 aa4.49□□□□□ -1.69
USP25-207ENST00000464435 KRT39Q6A163 491 aa4.49□□□□□ -1.69
USP25-207ENST00000464435 FAM109BQ6ICB4 259 aaPredicted RBP4.49□□□□□ -1.69
USP25-207ENST00000464435 TRNP1Q6NT89 227 aa4.49□□□□□ -1.69
USP25-207ENST00000464435 GTF2H2CQ6P1K8 395 aa4.49□□□□□ -1.69
USP25-207ENST00000464435 SHQ1Q6PI26 577 aaKnown RBP4.49□□□□□ -1.69
USP25-207ENST00000464435 TMPRSS11FQ6ZWK6 438 aa4.49□□□□□ -1.69
USP25-207ENST00000464435 DAZLQ92904 295 aaKnown RBP4.49□□□□□ -1.69
USP25-207ENST00000464435 SPATA17Q96L03 361 aa4.49□□□□□ -1.69
USP25-207ENST00000464435 ZNF558Q96NG5 402 aa4.49□□□□□ -1.69
USP25-207ENST00000464435 SLX1AQ9BQ83 275 aa4.49□□□□□ -1.69
USP25-207ENST00000464435 ADPGKQ9BRR6 497 aa4.49□□□□□ -1.69
USP25-207ENST00000464435 TRPC7Q9HCX4 862 aa4.49□□□□□ -1.69
USP25-207ENST00000464435 TCP11L1Q9NUJ3 509 aa4.49□□□□□ -1.69
USP25-207ENST00000464435 YIPF1Q9Y548 306 aa4.49□□□□□ -1.69
USP25-207ENST00000464435 SPIN1Q9Y657 262 aaPredicted RBP4.49□□□□□ -1.69
USP25-207ENST00000464435 TEX13DA0A0J9YY54 714 aaPredicted RBP4.48□□□□□ -1.69
USP25-207ENST00000464435 MEIS2O14770 477 aa4.48□□□□□ -1.69
USP25-207ENST00000464435 PPP1R3DO95685 299 aa4.48□□□□□ -1.69
USP25-207ENST00000464435 ACP2P11117 423 aa4.48□□□□□ -1.69
USP25-207ENST00000464435 MPZP25189 248 aa4.48□□□□□ -1.69
USP25-207ENST00000464435 PCGF2P35227 344 aa4.48□□□□□ -1.69
USP25-207ENST00000464435 GP5P40197 560 aa4.48□□□□□ -1.69
USP25-207ENST00000464435 PSMC4P43686 418 aa4.48□□□□□ -1.69
USP25-207ENST00000464435 ART1P52961 327 aa4.48□□□□□ -1.69
USP25-207ENST00000464435 GAS1P54826 345 aa4.48□□□□□ -1.69
USP25-207ENST00000464435 TPD52P55327 224 aaPredicted RBP4.48□□□□□ -1.69
USP25-207ENST00000464435 GRTP1Q5TC63 336 aa4.48□□□□□ -1.69
USP25-207ENST00000464435 CAVIN1Q6NZI2 390 aaKnown RBP4.48□□□□□ -1.69
USP25-207ENST00000464435 FAM171BQ6P995 826 aa4.48□□□□□ -1.69
USP25-207ENST00000464435 PLXDC2Q6UX71 529 aa4.48□□□□□ -1.69
USP25-207ENST00000464435 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.48□□□□□ -1.69
USP25-207ENST00000464435 DGLUCYQ7Z3D6 616 aa4.48□□□□□ -1.69
USP25-207ENST00000464435 SFR1Q86XK3 245 aa4.48□□□□□ -1.69
USP25-207ENST00000464435 KMT5CQ86Y97 462 aa4.48□□□□□ -1.69
USP25-207ENST00000464435 PAPD5Q8NDF8 572 aaKnown RBP4.48□□□□□ -1.69
USP25-207ENST00000464435 OR5M8Q8NGP6 311 aa4.48□□□□□ -1.69
USP25-207ENST00000464435 EXD1Q8NHP7 514 aa4.48□□□□□ -1.69
USP25-207ENST00000464435 CDCA5Q96FF9 252 aa4.48□□□□□ -1.69
USP25-207ENST00000464435 BICD1Q96G01 975 aa4.48□□□□□ -1.69
USP25-207ENST00000464435 C6orf106Q9H6K1 298 aaPredicted RBP4.48□□□□□ -1.69
USP25-207ENST00000464435 PIH1D3Q9NQM4 214 aaKnown RBP4.48□□□□□ -1.69
USP25-207ENST00000464435 RNF150Q9ULK6 438 aa4.48□□□□□ -1.69
USP25-207ENST00000464435 NOL7Q9UMY1 257 aaKnown RBP4.48□□□□□ -1.69
USP25-207ENST00000464435 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.48□□□□□ -1.69
USP25-207ENST00000464435 ANKRD66B4E2M5 251 aa4.47□□□□□ -1.69
USP25-207ENST00000464435 BUD23O43709 281 aaKnown RBP4.47□□□□□ -1.69
USP25-207ENST00000464435 GPR137BO60478 399 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms