RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 ENTPD4Q9Y227 616 aa8.25□□□□□ -1.09
NIF3L1-208ENST00000436412 KCNK6Q9Y257 313 aa8.25□□□□□ -1.09
NIF3L1-208ENST00000436412 FARSAQ9Y285 508 aaKnown RBP8.25□□□□□ -1.09
NIF3L1-208ENST00000436412 RGSL1A5PLK6 1076 aa8.24□□□□□ -1.09
NIF3L1-208ENST00000436412 ANKUB1A6NFN9 424 aa8.24□□□□□ -1.09
NIF3L1-208ENST00000436412 ARGFXA6NJG6 315 aa8.24□□□□□ -1.09
NIF3L1-208ENST00000436412 GPR89AB7ZAQ6 455 aa8.24□□□□□ -1.09
NIF3L1-208ENST00000436412 GRID2O43424 1007 aa8.24□□□□□ -1.09
NIF3L1-208ENST00000436412 NUAK1O60285 661 aa8.24□□□□□ -1.09
NIF3L1-208ENST00000436412 GFPT2O94808 682 aa8.24□□□□□ -1.09
NIF3L1-208ENST00000436412 ATP1A1P05023 1023 aaKnown RBP8.24□□□□□ -1.09
NIF3L1-208ENST00000436412 GPR89BP0CG08 455 aa8.24□□□□□ -1.09
NIF3L1-208ENST00000436412 TYRP1P17643 537 aa8.24□□□□□ -1.09
NIF3L1-208ENST00000436412 SOX5P35711 763 aa8.24□□□□□ -1.09
NIF3L1-208ENST00000436412 STC1P52823 247 aa8.24□□□□□ -1.09
NIF3L1-208ENST00000436412 RPL7AP62424 266 aaKnown RBP8.24□□□□□ -1.09
NIF3L1-208ENST00000436412 ACY1Q03154 408 aa8.24□□□□□ -1.09
NIF3L1-208ENST00000436412 CLEC16AQ2KHT3 1053 aa8.24□□□□□ -1.09
NIF3L1-208ENST00000436412 PRR30Q53SZ7 412 aaPredicted RBP8.24□□□□□ -1.09
NIF3L1-208ENST00000436412 MON1BQ7L1V2 547 aa8.24□□□□□ -1.09
NIF3L1-208ENST00000436412 TRIM48Q8IWZ4 208 aa8.24□□□□□ -1.09
NIF3L1-208ENST00000436412 IQCKQ8N0W5 287 aa8.24□□□□□ -1.09
NIF3L1-208ENST00000436412 NPWQ8N729 165 aa8.24□□□□□ -1.09
NIF3L1-208ENST00000436412 RBMXL3Q8N7X1 1067 aaKnown RBP8.24□□□□□ -1.09
NIF3L1-208ENST00000436412 GLIS1Q8NBF1 620 aa8.24□□□□□ -1.09
NIF3L1-208ENST00000436412 PIWIL2Q8TC59 973 aaKnown RBP8.24□□□□□ -1.09
NIF3L1-208ENST00000436412 FNIP1Q8TF40 1166 aa8.24□□□□□ -1.09
NIF3L1-208ENST00000436412 NSMCE1Q8WV22 266 aa8.24□□□□□ -1.09
NIF3L1-208ENST00000436412 UBXN4Q92575 508 aa8.24□□□□□ -1.09
NIF3L1-208ENST00000436412 ELMO2Q96JJ3 720 aa8.24□□□□□ -1.09
NIF3L1-208ENST00000436412 SLC41A2Q96JW4 573 aa8.24□□□□□ -1.09
NIF3L1-208ENST00000436412 MCEEQ96PE7 176 aa8.24□□□□□ -1.09
NIF3L1-208ENST00000436412 PCDHB18PQ96TA0 734 aa8.24□□□□□ -1.09
NIF3L1-208ENST00000436412 AGAP2Q99490 1192 aa8.24□□□□□ -1.09
NIF3L1-208ENST00000436412 SMAD5Q99717 465 aaKnown RBP8.24□□□□□ -1.09
NIF3L1-208ENST00000436412 DHX35Q9H5Z1 703 aaKnown RBP8.24□□□□□ -1.09
NIF3L1-208ENST00000436412 CNOT6Q9ULM6 557 aaKnown RBP8.24□□□□□ -1.09
NIF3L1-208ENST00000436412 PRKAB1Q9Y478 270 aa8.24□□□□□ -1.09
NIF3L1-208ENST00000436412 SLC30A1Q9Y6M5 507 aa8.24□□□□□ -1.09
NIF3L1-208ENST00000436412 ANKRD12Q6UB98 2062 aa8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 A0A0J9YYE9 177 aa8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 DBX1A6NMT0 343 aa8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 PES1O00541 588 aaKnown RBP8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 KLHL41O60662 606 aa8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 PEX11BO96011 259 aa8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 TRBC1P01850 177 aa8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 CTPS1P17812 591 aa8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 TNFAIP3P21580 790 aa8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 EPHB1P54762 984 aa8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 RRADP55042 308 aa8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 CDH6P55285 790 aa8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 ITGA1P56199 1179 aa8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 PER3P56645 1201 aa8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 JAM2P57087 298 aa8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 RPL26P61254 145 aaKnown RBP8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 CHAF1BQ13112 559 aa8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 TUBB3Q13509 450 aa8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 IL10RAQ13651 578 aa8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 LAMB3Q13751 1172 aa8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 SYCP1Q15431 976 aa8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 MLANAQ16655 118 aa8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 IZUMO3Q5VZ72 239 aa8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 PWWP2BQ6NUJ5 590 aa8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 KLHL35Q6PF15 583 aa8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 WASH2PQ6VEQ5 465 aa8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 ZNF517Q6ZMY9 492 aaPredicted RBP8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 RFLNAQ6ZTI6 216 aa8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 MED25Q71SY5 747 aa8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 KMT5CQ86Y97 462 aa8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 LRRC49Q8IUZ0 686 aa8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 PGBD5Q8N414 524 aa8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 SIDT2Q8NBJ9 832 aaKnown RBP8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 OR8K5Q8NH50 307 aa8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 ADAMTS17Q8TE56 1095 aa8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 SNRNP40Q96DI7 357 aaKnown RBP8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 KIRREL1Q96J84 757 aa8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 RHOVQ96L33 236 aa8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 ALPK1Q96QP1 1244 aa8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 LYSMD1Q96S90 227 aa8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 ZWILCHQ9H900 591 aa8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 WASH6PQ9NQA3 447 aa8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 KLC4Q9NSK0 619 aa8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 POT1Q9NUX5 634 aa8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 GPATCH2LQ9NWQ4 482 aa8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 FAM53CQ9NYF3 392 aa8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 GPR83Q9NYM4 423 aa8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 RPL26L1Q9UNX3 145 aaKnown RBP8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 PCYT1BQ9Y5K3 369 aaPredicted RBP8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 FER1L5A0AVI2 2057 aa8.23□□□□□ -1.09
NIF3L1-208ENST00000436412 HEATR9A2RTY3 570 aa8.22□□□□□ -1.09
NIF3L1-208ENST00000436412 KIF1CO43896 1103 aaKnown RBP8.22□□□□□ -1.09
NIF3L1-208ENST00000436412 PRPSAP2O60256 369 aa8.22□□□□□ -1.09
NIF3L1-208ENST00000436412 MAFKO60675 156 aa8.22□□□□□ -1.09
NIF3L1-208ENST00000436412 MTA2O94776 668 aa8.22□□□□□ -1.09
NIF3L1-208ENST00000436412 TMEM63AO94886 807 aa8.22□□□□□ -1.09
NIF3L1-208ENST00000436412 JCHAINP01591 159 aa8.22□□□□□ -1.09
NIF3L1-208ENST00000436412 KLK3P07288 261 aaPredicted RBP8.22□□□□□ -1.09
NIF3L1-208ENST00000436412 PDHA1P08559 390 aa8.22□□□□□ -1.09
NIF3L1-208ENST00000436412 RAB40ALP0C0E4 278 aa8.22□□□□□ -1.09
NIF3L1-208ENST00000436412 ATP1A3P13637 1013 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms