RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 HIST1H2AGP0C0S8 130 aaPredicted RBP18.59■□□□□ 0.57
USP39-202ENST00000409025 HIST1H2ADP20671 130 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 ACTR3P61158 418 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 SP140Q13342 867 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 E2F5Q15329 346 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 XKR7Q5GH72 579 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 TTC23LQ6PF05 361 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 ZNF765Q7L2R6 523 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 SPATA19Q7Z5L4 167 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 MILR1Q7Z6M3 343 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 PGAM4Q8N0Y7 254 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 DCBLD1Q8N8Z6 715 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 OR4F6Q8NGB9 312 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 ASB11Q8WXH4 323 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 FGF14Q92915 247 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 NUS1Q96E22 293 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 HIST1H2AHQ96KK5 128 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 RIPOR3Q96MK2 946 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 SERPINI1Q99574 410 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 HIST1H2AJQ99878 128 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 H2AFJQ9BTM1 129 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 TRMT61BQ9BVS5 477 aaKnown RBP18.59■□□□□ 0.57
USP39-202ENST00000409025 S1PR5Q9H228 398 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 CLEC1BQ9P126 229 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 INPP4BO15327 924 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 LZTS3O60299 673 aaPredicted RBP18.59■□□□□ 0.57
USP39-202ENST00000409025 PDE5AO76074 875 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 RECQL5O94762 991 aaPredicted RBP18.59■□□□□ 0.57
USP39-202ENST00000409025 CAPN1P07384 714 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 GPX3P22352 226 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 PSMD8P48556 350 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 TMEM115Q12893 351 aaPredicted RBP18.59■□□□□ 0.57
USP39-202ENST00000409025 TRAF3Q13114 568 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 GSTA3Q16772 222 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 MMEL1Q495T6 779 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 TMEM52BQ4KMG9 183 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 EGFLAMQ63HQ2 1017 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 OGFOD2Q6N063 350 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 VRK3Q8IV63 474 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 MIER2Q8N344 545 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 TCAIMQ8N3R3 496 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 BEND7Q8N7W2 519 aaPredicted RBP18.59■□□□□ 0.57
USP39-202ENST00000409025 RASGEF1AQ8N9B8 481 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 ACOX2Q99424 681 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 NPAS2Q99743 824 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 SLC25A23Q9BV35 468 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 ZDHHC4Q9NPG8 344 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 CACNA2D2Q9NY47 1150 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 NOP53Q9NZM5 478 aaKnown RBP18.59■□□□□ 0.57
USP39-202ENST00000409025 HCN2Q9UL51 889 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 TRANK1O15050 2925 aa18.58■□□□□ 0.56
USP39-202ENST00000409025 ATG13O75143 517 aa18.58■□□□□ 0.56
USP39-202ENST00000409025 KATNA1O75449 491 aa18.58■□□□□ 0.56
USP39-202ENST00000409025 STK16O75716 305 aa18.58■□□□□ 0.56
USP39-202ENST00000409025 PRR35P0CG20 571 aa18.58■□□□□ 0.56
USP39-202ENST00000409025 C6P13671 934 aa18.58■□□□□ 0.56
USP39-202ENST00000409025 IDO1P14902 403 aa18.58■□□□□ 0.56
USP39-202ENST00000409025 CYP2A7P20853 494 aa18.58■□□□□ 0.56
USP39-202ENST00000409025 GDF5P43026 501 aa18.58■□□□□ 0.56
USP39-202ENST00000409025 PIK3CGP48736 1102 aa18.58■□□□□ 0.56
USP39-202ENST00000409025 MTTPP55157 894 aa18.58■□□□□ 0.56
USP39-202ENST00000409025 RPS6KA2Q15349 733 aa18.58■□□□□ 0.56
USP39-202ENST00000409025 FAM46CQ5VWP2 391 aa18.58■□□□□ 0.56
USP39-202ENST00000409025 PAOXQ6QHF9 649 aa18.58■□□□□ 0.56
USP39-202ENST00000409025 SCIMPQ6UWF3 145 aa18.58■□□□□ 0.56
USP39-202ENST00000409025 BNC2Q6ZN30 1099 aaPredicted RBP18.58■□□□□ 0.56
USP39-202ENST00000409025 MBOAT1Q6ZNC8 495 aa18.58■□□□□ 0.56
USP39-202ENST00000409025 CHFRQ96EP1 664 aa18.58■□□□□ 0.56
USP39-202ENST00000409025 ABHD8Q96I13 439 aa18.58■□□□□ 0.56
USP39-202ENST00000409025 HDAC8Q9BY41 377 aa18.58■□□□□ 0.56
USP39-202ENST00000409025 WDR41Q9HAD4 459 aa18.58■□□□□ 0.56
USP39-202ENST00000409025 MMP20O60882 483 aa18.57■□□□□ 0.56
USP39-202ENST00000409025 KRT36O76013 467 aa18.57■□□□□ 0.56
USP39-202ENST00000409025 EPB42P16452 691 aa18.57■□□□□ 0.56
USP39-202ENST00000409025 HMOX2P30519 316 aa18.57■□□□□ 0.56
USP39-202ENST00000409025 PRLHRP49683 370 aa18.57■□□□□ 0.56
USP39-202ENST00000409025 CCDC6Q16204 474 aa18.57■□□□□ 0.56
USP39-202ENST00000409025 SYTL3Q4VX76 610 aa18.57■□□□□ 0.56
USP39-202ENST00000409025 RAB7BQ96AH8 199 aa18.57■□□□□ 0.56
USP39-202ENST00000409025 CCM2Q9BSQ5 444 aa18.57■□□□□ 0.56
USP39-202ENST00000409025 ST14Q9Y5Y6 855 aa18.57■□□□□ 0.56
USP39-202ENST00000409025 LRRK1Q38SD2 2015 aa18.57■□□□□ 0.56
USP39-202ENST00000409025 GFYI3L273 518 aa18.57■□□□□ 0.56
USP39-202ENST00000409025 TSPAN6O43657 245 aa18.57■□□□□ 0.56
USP39-202ENST00000409025 SLCO2B1O94956 709 aa18.57■□□□□ 0.56
USP39-202ENST00000409025 GGT5P36269 586 aa18.57■□□□□ 0.56
USP39-202ENST00000409025 HNMTP50135 292 aa18.57■□□□□ 0.56
USP39-202ENST00000409025 CTSCP53634 463 aa18.57■□□□□ 0.56
USP39-202ENST00000409025 CREB5Q02930 508 aa18.57■□□□□ 0.56
USP39-202ENST00000409025 RCN1Q15293 331 aa18.57■□□□□ 0.56
USP39-202ENST00000409025 TCHHL1Q5QJ38 904 aaPredicted RBP18.57■□□□□ 0.56
USP39-202ENST00000409025 TMEM220Q6QAJ8 160 aa18.57■□□□□ 0.56
USP39-202ENST00000409025 IL27RAQ6UWB1 636 aa18.57■□□□□ 0.56
USP39-202ENST00000409025 HPS6Q86YV9 775 aa18.57■□□□□ 0.56
USP39-202ENST00000409025 HOMEZQ8IX15 550 aa18.57■□□□□ 0.56
USP39-202ENST00000409025 OR9I1Q8NGQ6 314 aa18.57■□□□□ 0.56
USP39-202ENST00000409025 MCOLN3Q8TDD5 553 aa18.57■□□□□ 0.56
USP39-202ENST00000409025 CXorf40AQ8TE69 158 aa18.57■□□□□ 0.56
USP39-202ENST00000409025 ZCCHC2Q9C0B9 1178 aaKnown RBP18.57■□□□□ 0.56
USP39-202ENST00000409025 SLC32A1Q9H598 525 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms