RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 FAM219AQ8IW50 185 aa3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 OR8H3Q8N146 312 aa3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 IQCF1Q8N6M8 205 aa3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 SPATA20Q8TB22 786 aa3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 MAGEC3Q8TD91 643 aa3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 SCARB1Q8WTV0 552 aa3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 TMEM255BQ8WV15 326 aa3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 CDCA5Q96FF9 252 aa3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 STAMBPL1Q96FJ0 436 aa3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 OTUB1Q96FW1 271 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 ZPBPQ9BS86 351 aa3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 KATNB1Q9BVA0 655 aa3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 PELI2Q9HAT8 420 aa3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 Q9N2K0 584 aa3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 PADI2Q9Y2J8 665 aa3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 YIPF1Q9Y548 306 aa3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 TAF1P21675 1872 aa3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 ZNF541Q9H0D2 1346 aa3.71□□□□□ -1.81
HMGB1P17-201ENST00000403495 HYKKA2RU49 373 aa3.71□□□□□ -1.82
HMGB1P17-201ENST00000403495 GPR137BO60478 399 aa3.71□□□□□ -1.82
HMGB1P17-201ENST00000403495 MED24O75448 989 aa3.71□□□□□ -1.82
HMGB1P17-201ENST00000403495 NTN1O95631 604 aa3.71□□□□□ -1.82
HMGB1P17-201ENST00000403495 PPP1R3DO95685 299 aa3.71□□□□□ -1.82
HMGB1P17-201ENST00000403495 ATP5BP06576 529 aaKnown RBP3.71□□□□□ -1.82
HMGB1P17-201ENST00000403495 OR2T7P0C7T2 308 aa3.71□□□□□ -1.82
HMGB1P17-201ENST00000403495 SMIM18P0DKX4 95 aa3.71□□□□□ -1.82
HMGB1P17-201ENST00000403495 CKMT2P17540 419 aa3.71□□□□□ -1.82
HMGB1P17-201ENST00000403495 KCNJ4P48050 445 aa3.71□□□□□ -1.82
HMGB1P17-201ENST00000403495 ARCN1P48444 511 aaKnown RBP3.71□□□□□ -1.82
HMGB1P17-201ENST00000403495 FUT6P51993 359 aa3.71□□□□□ -1.82
HMGB1P17-201ENST00000403495 DSCR9P59020 149 aa3.71□□□□□ -1.82
HMGB1P17-201ENST00000403495 EGR4Q05215 589 aa3.71□□□□□ -1.82
HMGB1P17-201ENST00000403495 TRAF2Q12933 501 aa3.71□□□□□ -1.82
HMGB1P17-201ENST00000403495 ZNF273Q14593 569 aa3.71□□□□□ -1.82
HMGB1P17-201ENST00000403495 MPP7Q5T2T1 576 aa3.71□□□□□ -1.82
HMGB1P17-201ENST00000403495 GRTP1Q5TC63 336 aa3.71□□□□□ -1.82
HMGB1P17-201ENST00000403495 NDUFAF5Q5TEU4 345 aa3.71□□□□□ -1.82
HMGB1P17-201ENST00000403495 KLC3Q6P597 504 aa3.71□□□□□ -1.82
HMGB1P17-201ENST00000403495 MFSD6Q6ZSS7 791 aa3.71□□□□□ -1.82
HMGB1P17-201ENST00000403495 PIWIL4Q7Z3Z4 852 aaKnown RBP3.71□□□□□ -1.82
HMGB1P17-201ENST00000403495 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.71□□□□□ -1.82
HMGB1P17-201ENST00000403495 ARHGAP24Q8N264 748 aa3.71□□□□□ -1.82
HMGB1P17-201ENST00000403495 IQUBQ8NA54 791 aa3.71□□□□□ -1.82
HMGB1P17-201ENST00000403495 EXD1Q8NHP7 514 aa3.71□□□□□ -1.82
HMGB1P17-201ENST00000403495 SPSB1Q96BD6 273 aa3.71□□□□□ -1.82
HMGB1P17-201ENST00000403495 MTERF3Q96E29 417 aa3.71□□□□□ -1.82
HMGB1P17-201ENST00000403495 TTC14Q96N46 770 aa3.71□□□□□ -1.82
HMGB1P17-201ENST00000403495 SFXN2Q96NB2 322 aa3.71□□□□□ -1.82
HMGB1P17-201ENST00000403495 MGME1Q9BQP7 344 aa3.71□□□□□ -1.82
HMGB1P17-201ENST00000403495 POLR3CQ9BUI4 534 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P17-201ENST00000403495 TRAF4Q9BUZ4 470 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P17-201ENST00000403495 SLC25A23Q9BV35 468 aa3.71□□□□□ -1.82
HMGB1P17-201ENST00000403495 MOV10L1Q9BXT6 1211 aaKnown RBP3.71□□□□□ -1.82
HMGB1P17-201ENST00000403495 FZD8Q9H461 694 aa3.71□□□□□ -1.82
HMGB1P17-201ENST00000403495 UBTD1Q9HAC8 227 aa3.71□□□□□ -1.82
HMGB1P17-201ENST00000403495 DNAJB9Q9UBS3 223 aa3.71□□□□□ -1.82
HMGB1P17-201ENST00000403495 DLGAP4Q9Y2H0 992 aa3.71□□□□□ -1.82
HMGB1P17-201ENST00000403495 PCSK5Q92824 1860 aa3.71□□□□□ -1.82
HMGB1P17-201ENST00000403495 SAA2-SAA4A0A096LPE2 208 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 OAZ2O95190 189 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 TFAP2AP05549 437 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 DANCRP0C864 163 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 SCG2P13521 617 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 PDGFRAP16234 1089 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 GM2AP17900 193 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 CD22P20273 847 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 MUTP22033 750 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 MTHFRP42898 656 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 ZNF75DP51815 510 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 THOP1P52888 689 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 MAPK12P53778 367 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 RBP5P82980 135 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 MBTD1Q05BQ5 628 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 KIF5AQ12840 1032 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 GAGE2BQ13066 116 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 PPIGQ13427 754 aaKnown RBP eCLIP3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 PTPRCAPQ14761 206 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 GAGE2EQ4V326 116 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 PHLDA2Q53GA4 152 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 LBHQ53QV2 105 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 LRCH2Q5VUJ6 765 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 PLA2G4FQ68DD2 849 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 GAGE2AQ6NT46 116 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 TRNP1Q6NT89 227 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 FAM122CQ6P4D5 195 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 PRSS57Q6UWY2 283 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 ZNF704Q6ZNC4 412 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 ERN2Q76MJ5 926 aaKnown RBP3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 ARHGAP22Q7Z5H3 698 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 ADCK2Q7Z695 626 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 GLRX5Q86SX6 157 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 METTL23Q86XA0 190 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 SPATA2LQ8IUW3 424 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 MFN1Q8IWA4 741 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 CFAP206Q8IYR0 622 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 KBTBD3Q8NAB2 608 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 SYN2Q92777 582 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 EXOC4Q96A65 974 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 RTP4Q96DX8 246 aa3.7□□□□□ -1.82
HMGB1P17-201ENST00000403495 BICD1Q96G01 975 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms