RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 OR1E1P30953 314 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 DCTP40126 519 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 SPIDRQ14159 915 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 ATP6AP1LQ52LC2 224 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 SPESP1Q6UW49 350 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 NECAB2Q7Z6G3 386 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 LEMD2Q8NC56 503 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 FBLIM1Q8WUP2 373 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 TNKS2Q9H2K2 1166 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 GORASP2Q9H8Y8 452 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 HPS4Q9NQG7 708 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 ADGRE2Q9UHX3 823 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 FKBPLQ9UIM3 349 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 PAIP2BQ9ULR5 123 aaKnown RBP13.7□□□□□ -0.22
NUP98-204ENST00000397004 SCML2Q9UQR0 700 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 DEAF1O75398 565 aaPredicted RBP13.7□□□□□ -0.22
NUP98-204ENST00000397004 BMP4P12644 408 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 HLA-DPA1P20036 260 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 TGM1P22735 817 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 SLC6A4P31645 630 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 GDF5P43026 501 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 RAD51Q06609 339 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 MGAT3Q09327 533 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 PWP1Q13610 501 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 SMN1Q16637 294 aaKnown RBP13.7□□□□□ -0.22
NUP98-204ENST00000397004 TMEM236Q5W0B7 351 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 FAM126BQ8IXS8 530 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 TTC16Q8NEE8 873 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 PDZD8Q8NEN9 1154 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 NETO1Q8TDF5 533 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 ZNF382Q96SR6 550 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 BEGAINQ9BUH8 593 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 KLQ9UEF7 1012 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 AGO1Q9UL18 857 aaKnown RBP13.7□□□□□ -0.22
NUP98-204ENST00000397004 ZNF232Q9UNY5 417 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 NOD1Q9Y239 953 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 NUP214P35658 2090 aaPredicted RBP13.7□□□□□ -0.22
NUP98-204ENST00000397004 TAPBPO15533 448 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 TULP3O75386 442 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 GZMMP51124 257 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 KCNQ1P51787 676 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 TRAF3Q13114 568 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 SLC14A1Q13336 389 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 AP5B1Q2VPB7 878 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 SUSD1Q6UWL2 747 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 SBSNQ6UWP8 590 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 GOLGA7Q7Z5G4 137 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 ANKRD13BQ86YJ7 626 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 PLPP6Q8IY26 295 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 TMCO5AQ8N6Q1 288 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 RPL3LQ92901 407 aaKnown RBP13.7□□□□□ -0.22
NUP98-204ENST00000397004 MYOCQ99972 504 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 ERVK-18Q9QC07 812 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 WARS2Q9UGM6 360 aaKnown RBP13.7□□□□□ -0.22
NUP98-204ENST00000397004 ZMYM5Q9UJ78 669 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 BAG5Q9UL15 447 aa13.7□□□□□ -0.22
NUP98-204ENST00000397004 LOC100130705A0A1B0GUX0 176 aa13.69□□□□□ -0.22
NUP98-204ENST00000397004 CLCN7P51798 805 aa13.69□□□□□ -0.22
NUP98-204ENST00000397004 VBP1P61758 197 aa13.69□□□□□ -0.22
NUP98-204ENST00000397004 MORN1Q5T089 497 aa13.69□□□□□ -0.22
NUP98-204ENST00000397004 ZNF691Q5VV52 312 aa13.69□□□□□ -0.22
NUP98-204ENST00000397004 SPRYD7Q5W111 196 aa13.69□□□□□ -0.22
NUP98-204ENST00000397004 ALG1LQ6GMV1 187 aa13.69□□□□□ -0.22
NUP98-204ENST00000397004 MON1AQ86VX9 555 aa13.69□□□□□ -0.22
NUP98-204ENST00000397004 ATAD1Q8NBU5 361 aa13.69□□□□□ -0.22
NUP98-204ENST00000397004 PEX13Q92968 403 aa13.69□□□□□ -0.22
NUP98-204ENST00000397004 SUSD3Q96L08 255 aa13.69□□□□□ -0.22
NUP98-204ENST00000397004 ZNF641Q96N77 438 aaPredicted RBP13.69□□□□□ -0.22
NUP98-204ENST00000397004 CCDC115Q96NT0 180 aa13.69□□□□□ -0.22
NUP98-204ENST00000397004 RPRD1AQ96P16 312 aaPredicted RBP13.69□□□□□ -0.22
NUP98-204ENST00000397004 SYTL2Q9HCH5 934 aa13.69□□□□□ -0.22
NUP98-204ENST00000397004 FNIP2Q9P278 1114 aa13.69□□□□□ -0.22
NUP98-204ENST00000397004 MTRRQ9UBK8 725 aa13.69□□□□□ -0.22
NUP98-204ENST00000397004 LIMD1Q9UGP4 676 aa13.69□□□□□ -0.22
NUP98-204ENST00000397004 PADI3Q9ULW8 664 aa13.69□□□□□ -0.22
NUP98-204ENST00000397004 PCDHGC4Q9Y5F7 938 aa13.69□□□□□ -0.22
NUP98-204ENST00000397004 AQP9O43315 295 aa13.69□□□□□ -0.22
NUP98-204ENST00000397004 HMGCS1Q01581 520 aa13.69□□□□□ -0.22
NUP98-204ENST00000397004 CDK5R2Q13319 367 aa13.69□□□□□ -0.22
NUP98-204ENST00000397004 PON2Q15165 354 aa13.69□□□□□ -0.22
NUP98-204ENST00000397004 SPANXN4Q5MJ08 99 aa13.69□□□□□ -0.22
NUP98-204ENST00000397004 TAF2Q6P1X5 1199 aa13.69□□□□□ -0.22
NUP98-204ENST00000397004 CEP68Q76N32 757 aa13.69□□□□□ -0.22
NUP98-204ENST00000397004 DCP2Q8IU60 420 aaKnown RBP13.69□□□□□ -0.22
NUP98-204ENST00000397004 CCDC71Q8IV32 467 aaPredicted RBP13.69□□□□□ -0.22
NUP98-204ENST00000397004 OR2T12Q8NG77 320 aa13.69□□□□□ -0.22
NUP98-204ENST00000397004 SLX1AQ9BQ83 275 aa13.69□□□□□ -0.22
NUP98-204ENST00000397004 VWA8A3KMH1 1905 aa13.69□□□□□ -0.22
NUP98-204ENST00000397004 EPOP01588 193 aa13.69□□□□□ -0.22
NUP98-204ENST00000397004 SGSHP51688 502 aa13.69□□□□□ -0.22
NUP98-204ENST00000397004 FAM174BQ3ZCQ3 159 aa13.69□□□□□ -0.22
NUP98-204ENST00000397004 FAM98BQ52LJ0 330 aaKnown RBP13.69□□□□□ -0.22
NUP98-204ENST00000397004 CARD16Q5EG05 197 aa13.69□□□□□ -0.22
NUP98-204ENST00000397004 GALNT5Q7Z7M9 940 aa13.69□□□□□ -0.22
NUP98-204ENST00000397004 GPSM1Q86YR5 675 aa13.69□□□□□ -0.22
NUP98-204ENST00000397004 OR56A4Q8NGH8 313 aa13.69□□□□□ -0.22
NUP98-204ENST00000397004 METTL6Q8TCB7 284 aa13.69□□□□□ -0.22
NUP98-204ENST00000397004 SLCO3A1Q9UIG8 710 aa13.69□□□□□ -0.22
NUP98-204ENST00000397004 ERVK-11Q9UQG0 969 aa13.69□□□□□ -0.22
NUP98-204ENST00000397004 TRBV5-3A0A0A0MS03 114 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms