RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 SLC46A1Q96NT5 459 aa11.74□□□□□ -0.53
HDAC8-201ENST00000373554 PANX3Q96QZ0 392 aa11.74□□□□□ -0.53
HDAC8-201ENST00000373554 TCF12Q99081 682 aa11.74□□□□□ -0.53
HDAC8-201ENST00000373554 TRIM56Q9BRZ2 755 aaKnown RBP11.74□□□□□ -0.53
HDAC8-201ENST00000373554 NAT9Q9BTE0 207 aa11.74□□□□□ -0.53
HDAC8-201ENST00000373554 TRIM31Q9BZY9 425 aa11.74□□□□□ -0.53
HDAC8-201ENST00000373554 OR52A5Q9H2C5 316 aa11.74□□□□□ -0.53
HDAC8-201ENST00000373554 KIR3DX1Q9H7L2 352 aa11.74□□□□□ -0.53
HDAC8-201ENST00000373554 ASCL3Q9NQ33 180 aa11.74□□□□□ -0.53
HDAC8-201ENST00000373554 TMEM9Q9P0T7 183 aa11.74□□□□□ -0.53
HDAC8-201ENST00000373554 PISDQ9UG56 409 aa11.74□□□□□ -0.53
HDAC8-201ENST00000373554 VPS9D1Q9Y2B5 631 aa11.74□□□□□ -0.53
HDAC8-201ENST00000373554 MN1Q10571 1320 aaPredicted RBP11.74□□□□□ -0.53
HDAC8-201ENST00000373554 ASPMQ8IZT6 3477 aa11.73□□□□□ -0.53
HDAC8-201ENST00000373554 PMS2P1A4D2B8 440 aa11.73□□□□□ -0.53
HDAC8-201ENST00000373554 FAM187AA6NFU0 413 aa11.73□□□□□ -0.53
HDAC8-201ENST00000373554 AGRPO00253 132 aa11.73□□□□□ -0.53
HDAC8-201ENST00000373554 SEC31AO94979 1220 aaKnown RBP11.73□□□□□ -0.53
HDAC8-201ENST00000373554 APOA4P06727 396 aa11.73□□□□□ -0.53
HDAC8-201ENST00000373554 HGFP14210 728 aa11.73□□□□□ -0.53
HDAC8-201ENST00000373554 ITGB6P18564 788 aa11.73□□□□□ -0.53
HDAC8-201ENST00000373554 RPS3P23396 243 aaKnown RBP eCLIP11.73□□□□□ -0.53
HDAC8-201ENST00000373554 IVDP26440 423 aa11.73□□□□□ -0.53
HDAC8-201ENST00000373554 PDHA2P29803 388 aa11.73□□□□□ -0.53
HDAC8-201ENST00000373554 CSTF2P33240 577 aaKnown RBP eCLIP11.73□□□□□ -0.53
HDAC8-201ENST00000373554 ARCN1P48444 511 aaKnown RBP11.73□□□□□ -0.53
HDAC8-201ENST00000373554 ITGA8P53708 1063 aa11.73□□□□□ -0.53
HDAC8-201ENST00000373554 EIF3BP55884 814 aaKnown RBP11.73□□□□□ -0.53
HDAC8-201ENST00000373554 PCBP4P57723 403 aaKnown RBP11.73□□□□□ -0.53
HDAC8-201ENST00000373554 DHX9Q08211 1270 aaKnown RBP11.73□□□□□ -0.53
HDAC8-201ENST00000373554 C2orf54Q08AI8 447 aa11.73□□□□□ -0.53
HDAC8-201ENST00000373554 BRD3Q15059 726 aa11.73□□□□□ -0.53
HDAC8-201ENST00000373554 HIF1AQ16665 826 aa11.73□□□□□ -0.53
HDAC8-201ENST00000373554 LONRF1Q17RB8 773 aa11.73□□□□□ -0.53
HDAC8-201ENST00000373554 BBS9Q3SYG4 887 aa11.73□□□□□ -0.53
HDAC8-201ENST00000373554 HIBCHQ6NVY1 386 aaPredicted RBP11.73□□□□□ -0.53
HDAC8-201ENST00000373554 NEPROQ6NW34 567 aa11.73□□□□□ -0.53
HDAC8-201ENST00000373554 CILP2Q8IUL8 1156 aa11.73□□□□□ -0.53
HDAC8-201ENST00000373554 LMNTD2Q8IXW0 634 aa11.73□□□□□ -0.53
HDAC8-201ENST00000373554 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.73□□□□□ -0.53
HDAC8-201ENST00000373554 BBOF1Q8ND07 529 aa11.73□□□□□ -0.53
HDAC8-201ENST00000373554 SNIP1Q8TAD8 396 aaKnown RBP11.73□□□□□ -0.53
HDAC8-201ENST00000373554 CALML6Q8TD86 181 aa11.73□□□□□ -0.53
HDAC8-201ENST00000373554 ASZ1Q8WWH4 475 aa11.73□□□□□ -0.53
HDAC8-201ENST00000373554 RSC1A1Q92681 617 aa11.73□□□□□ -0.53
HDAC8-201ENST00000373554 TFGQ92734 400 aaPredicted RBP11.73□□□□□ -0.53
HDAC8-201ENST00000373554 FGF11Q92914 225 aa11.73□□□□□ -0.53
HDAC8-201ENST00000373554 PRR11Q96HE9 360 aaPredicted RBP11.73□□□□□ -0.53
HDAC8-201ENST00000373554 SIGLEC10Q96LC7 697 aa11.73□□□□□ -0.53
HDAC8-201ENST00000373554 FCRL3Q96P31 734 aaPredicted RBP11.73□□□□□ -0.53
HDAC8-201ENST00000373554 TGM7Q96PF1 710 aa11.73□□□□□ -0.53
HDAC8-201ENST00000373554 CARD6Q9BX69 1037 aa11.73□□□□□ -0.53
HDAC8-201ENST00000373554 P2RY12Q9H244 342 aa11.73□□□□□ -0.53
HDAC8-201ENST00000373554 OGFRQ9NZT2 677 aa11.73□□□□□ -0.53
HDAC8-201ENST00000373554 PDP2Q9P2J9 529 aa11.73□□□□□ -0.53
HDAC8-201ENST00000373554 KLHL3Q9UH77 587 aa11.73□□□□□ -0.53
HDAC8-201ENST00000373554 SLC24A2Q9UI40 661 aa11.73□□□□□ -0.53
HDAC8-201ENST00000373554 RAXQ9Y2V3 346 aa11.73□□□□□ -0.53
HDAC8-201ENST00000373554 UNC13CQ8NB66 2214 aa11.72□□□□□ -0.53
HDAC8-201ENST00000373554 USP24Q9UPU5 2620 aa11.72□□□□□ -0.53
HDAC8-201ENST00000373554 ZCWPW2A0A1B0GU75 182 aa11.72□□□□□ -0.53
HDAC8-201ENST00000373554 SLC5A10A0PJK1 596 aa11.72□□□□□ -0.53
HDAC8-201ENST00000373554 SRRM3A6NNA2 597 aaPredicted RBP11.72□□□□□ -0.53
HDAC8-201ENST00000373554 IQCF5A8MTL0 148 aa11.72□□□□□ -0.53
HDAC8-201ENST00000373554 A8MU76 341 aa11.72□□□□□ -0.53
HDAC8-201ENST00000373554 H3BMM5 538 aa11.72□□□□□ -0.53
HDAC8-201ENST00000373554 KIF2AO00139 706 aaPredicted RBP11.72□□□□□ -0.53
HDAC8-201ENST00000373554 TAF4O00268 1085 aa11.72□□□□□ -0.53
HDAC8-201ENST00000373554 KPNA5O15131 536 aa11.72□□□□□ -0.53
HDAC8-201ENST00000373554 CAPN5O15484 640 aaPredicted RBP11.72□□□□□ -0.53
HDAC8-201ENST00000373554 RASSF9O75901 435 aa11.72□□□□□ -0.53
HDAC8-201ENST00000373554 URI1O94763 535 aaPredicted RBP11.72□□□□□ -0.53
HDAC8-201ENST00000373554 TTC4O95801 387 aa11.72□□□□□ -0.53
HDAC8-201ENST00000373554 ESR1P03372 595 aa11.72□□□□□ -0.53
HDAC8-201ENST00000373554 ITIH1P19827 911 aa11.72□□□□□ -0.53
HDAC8-201ENST00000373554 CCR7P32248 378 aa11.72□□□□□ -0.53
HDAC8-201ENST00000373554 CSE1LP55060 971 aaKnown RBP11.72□□□□□ -0.53
HDAC8-201ENST00000373554 GFERP55789 205 aa11.72□□□□□ -0.53
HDAC8-201ENST00000373554 ARL4CP56559 192 aa11.72□□□□□ -0.53
HDAC8-201ENST00000373554 HSPA14Q0VDF9 509 aa11.72□□□□□ -0.53
HDAC8-201ENST00000373554 CALCOCO2Q13137 446 aa11.72□□□□□ -0.53
HDAC8-201ENST00000373554 CRYMQ14894 314 aa11.72□□□□□ -0.53
HDAC8-201ENST00000373554 TMEM164Q5U3C3 297 aa11.72□□□□□ -0.53
HDAC8-201ENST00000373554 ARMC6Q6NXE6 501 aa11.72□□□□□ -0.53
HDAC8-201ENST00000373554 IRGCQ6NXR0 463 aa11.72□□□□□ -0.53
HDAC8-201ENST00000373554 NAPRTQ6XQN6 538 aa11.72□□□□□ -0.53
HDAC8-201ENST00000373554 OOSP2Q86WS3 158 aa11.72□□□□□ -0.53
HDAC8-201ENST00000373554 FAM129CQ86XR2 697 aa11.72□□□□□ -0.53
HDAC8-201ENST00000373554 AGGF1Q8N302 714 aaeCLIP11.72□□□□□ -0.53
HDAC8-201ENST00000373554 ACVR1CQ8NER5 493 aa11.72□□□□□ -0.53
HDAC8-201ENST00000373554 GABPB2Q8TAK5 448 aaPredicted RBP11.72□□□□□ -0.53
HDAC8-201ENST00000373554 GSDMBQ8TAX9 411 aa11.72□□□□□ -0.53
HDAC8-201ENST00000373554 JPH3Q8WXH2 748 aaPredicted RBP11.72□□□□□ -0.53
HDAC8-201ENST00000373554 LPGAT1Q92604 370 aa11.72□□□□□ -0.53
HDAC8-201ENST00000373554 ZNF592Q92610 1267 aa11.72□□□□□ -0.53
HDAC8-201ENST00000373554 LRRC39Q96DD0 335 aa11.72□□□□□ -0.53
HDAC8-201ENST00000373554 ZDHHC12Q96GR4 267 aa11.72□□□□□ -0.53
HDAC8-201ENST00000373554 FERD3LQ96RJ6 166 aa11.72□□□□□ -0.53
HDAC8-201ENST00000373554 EBNA1BP2Q99848 306 aaKnown RBP11.72□□□□□ -0.53
HDAC8-201ENST00000373554 FAM167BQ9BTA0 163 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms