RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 SLC22A16Q86VW1 577 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 ZFAND4Q86XD8 727 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 LRRC49Q8IUZ0 686 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 KRTCAP2Q8N6L1 136 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 PDPRQ8NCN5 879 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 UPF1Q92900 1129 aaKnown RBP eCLIP8.06□□□□□ -1.124e-12■■□□□ 13.3
CD46-208ENST00000367042 NSMCE3Q96MG7 304 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 AMBRA1Q9C0C7 1298 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 DERL2Q9GZP9 239 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 ARNT2Q9HBZ2 717 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 ITM2CQ9NQX7 267 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 ERVK-18Q9QC07 812 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 DNAJB9Q9UBS3 223 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 FAM8A1Q9UBU6 413 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 NEU3Q9UQ49 428 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 SPO11Q9Y5K1 396 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 BRCA2P51587 3418 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 LOC100506127A0A0U1RQW1 187 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 LCHNA4D1U4 455 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 HTR3EA5X5Y0 456 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 hCG_2039718K7EN88 272 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 BNIP3LO60238 219 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 SULT1C4O75897 302 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 MYO1DO94832 1006 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 CPNE6O95741 557 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 GSTT2P0CG29 244 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 GSTT2BP0CG30 244 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 IGFBP5P24593 272 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 GJA5P36382 358 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 TGFBR1P36897 503 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 ABRAXAS2Q15018 415 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 NPTX1Q15818 432 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 CPSF6Q16630 551 aaKnown RBP eCLIP8.06□□□□□ -1.122e-7■■□□□ 13.3
CD46-208ENST00000367042 XKR4Q5GH76 650 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 ANGPTL8Q6UXH0 198 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 P2RY8Q86VZ1 359 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 PTRH1Q86Y79 214 aaKnown RBP8.06□□□□□ -1.12
CD46-208ENST00000367042 POC5Q8NA72 575 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 ARRDC2Q8TBH0 407 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 CAPSLQ8WWF8 208 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 HDAC2Q92769 488 aaKnown RBP8.06□□□□□ -1.12
CD46-208ENST00000367042 ALPK1Q96QP1 1244 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 DOK1Q99704 481 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 YIPF2Q9BWQ6 316 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 CARS2Q9HA77 564 aaKnown RBP8.06□□□□□ -1.12
CD46-208ENST00000367042 CSNK1G1Q9HCP0 422 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 ZIM2Q9NZV7 527 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 ZNF225Q9UK10 706 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 VPS4AQ9UN37 437 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 KCNH4Q9UQ05 1017 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 GMPPBQ9Y5P6 360 aa8.06□□□□□ -1.12
CD46-208ENST00000367042 TRIM64CA6NLI5 447 aa8.05□□□□□ -1.12
CD46-208ENST00000367042 DBTP11182 482 aaKnown RBP8.05□□□□□ -1.12
CD46-208ENST00000367042 HOXB8P17481 243 aaPredicted RBP8.05□□□□□ -1.12
CD46-208ENST00000367042 MSH3P20585 1137 aa8.05□□□□□ -1.12
CD46-208ENST00000367042 PBX3P40426 434 aa8.05□□□□□ -1.12
CD46-208ENST00000367042 TRPC1P48995 793 aa8.05□□□□□ -1.12
CD46-208ENST00000367042 CPT1AP50416 773 aa8.05□□□□□ -1.12
CD46-208ENST00000367042 ST13P50502 369 aaKnown RBP8.05□□□□□ -1.12
CD46-208ENST00000367042 RAB15P59190 212 aa8.05□□□□□ -1.12
CD46-208ENST00000367042 CYP4F2P78329 520 aa8.05□□□□□ -1.12
CD46-208ENST00000367042 PWP1Q13610 501 aa8.05□□□□□ -1.12
CD46-208ENST00000367042 RAPSNQ13702 412 aa8.05□□□□□ -1.12
CD46-208ENST00000367042 TUBA3CQ13748 450 aa8.05□□□□□ -1.12
CD46-208ENST00000367042 ARHGEF7Q14155 803 aa8.05□□□□□ -1.12
CD46-208ENST00000367042 SLC14A2Q15849 920 aa8.05□□□□□ -1.12
CD46-208ENST00000367042 CACHD1Q5VU97 1274 aa8.05□□□□□ -1.12
CD46-208ENST00000367042 AFTPHQ6ULP2 937 aa8.05□□□□□ -1.12
CD46-208ENST00000367042 Q6ZSR9 355 aa8.05□□□□□ -1.12
CD46-208ENST00000367042 AHSA2Q719I0 299 aa8.05□□□□□ -1.12
CD46-208ENST00000367042 LIMS2Q7Z4I7 341 aa8.05□□□□□ -1.12
CD46-208ENST00000367042 HORMAD1Q86X24 394 aa8.05□□□□□ -1.12
CD46-208ENST00000367042 PIANPQ8IYJ0 282 aa8.05□□□□□ -1.12
CD46-208ENST00000367042 SYTL1Q8IYJ3 562 aa8.05□□□□□ -1.12
CD46-208ENST00000367042 LIX1Q8N485 282 aa8.05□□□□□ -1.12
CD46-208ENST00000367042 GOLM1Q8NBJ4 401 aa8.05□□□□□ -1.12
CD46-208ENST00000367042 BPIFB1Q8TDL5 484 aa8.05□□□□□ -1.12
CD46-208ENST00000367042 TSSK3Q96PN8 268 aa8.05□□□□□ -1.12
CD46-208ENST00000367042 NSUN3Q9H649 340 aaKnown RBP8.05□□□□□ -1.12
CD46-208ENST00000367042 PARVBQ9HBI1 364 aa8.05□□□□□ -1.12
CD46-208ENST00000367042 SCUBE2Q9NQ36 999 aa8.05□□□□□ -1.12
CD46-208ENST00000367042 LINC00854A0A1B0GVQ3 168 aa8.05□□□□□ -1.12
CD46-208ENST00000367042 MBLAC1A4D2B0 266 aaPredicted RBP8.05□□□□□ -1.12
CD46-208ENST00000367042 TBX1O43435 398 aa8.05□□□□□ -1.12
CD46-208ENST00000367042 SH3BGRLO75368 114 aa8.05□□□□□ -1.12
CD46-208ENST00000367042 NDST3O95803 873 aa8.05□□□□□ -1.12
CD46-208ENST00000367042 RPS17P08708 135 aaKnown RBP8.05□□□□□ -1.12
CD46-208ENST00000367042 HSMCR30P0CW71 290 aa8.05□□□□□ -1.12
CD46-208ENST00000367042 IRF1P10914 325 aa8.05□□□□□ -1.12
CD46-208ENST00000367042 CTPS1P17812 591 aa8.05□□□□□ -1.12
CD46-208ENST00000367042 GGT1P19440 569 aa8.05□□□□□ -1.12
CD46-208ENST00000367042 EFNA1P20827 205 aaPredicted RBP8.05□□□□□ -1.12
CD46-208ENST00000367042 MRPS6P82932 125 aaKnown RBP8.05□□□□□ -1.12
CD46-208ENST00000367042 GTF2H2Q13888 395 aa8.05□□□□□ -1.12
CD46-208ENST00000367042 CCL14Q16627 93 aa8.05□□□□□ -1.12
CD46-208ENST00000367042 SMN1Q16637 294 aaKnown RBP8.05□□□□□ -1.12
CD46-208ENST00000367042 COQ5Q5HYK3 327 aa8.05□□□□□ -1.12
CD46-208ENST00000367042 GTF2H2CQ6P1K8 395 aa8.05□□□□□ -1.12
CD46-208ENST00000367042 TXNDC11Q6PKC3 985 aa8.05□□□□□ -1.12
CD46-208ENST00000367042 LINGO4Q6UY18 593 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms