RNA–Protein interactions for RNA: ENST00000358506.6

PPP1CB-202, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PPP1CB, Length 4,771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-202ENST00000358506 TEAD2Q15562 447 aa16.31■□□□□ 0.2
PPP1CB-202ENST00000358506 BEND7Q8N7W2 519 aaPredicted RBP16.31■□□□□ 0.2
PPP1CB-202ENST00000358506 KCNJ9Q92806 393 aa16.31■□□□□ 0.2
PPP1CB-202ENST00000358506 NSUN3Q9H649 340 aaKnown RBP16.31■□□□□ 0.2
PPP1CB-202ENST00000358506 GNAZP19086 355 aa16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 EFNA1P20827 205 aaPredicted RBP16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 APLP1P51693 650 aa16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 MANFP55145 182 aaKnown RBP16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 TOP3AQ13472 1001 aaPredicted RBP16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 C1DQ13901 141 aaKnown RBP16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 C16orf72Q14CZ0 275 aa16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 SLC5A9Q2M3M2 681 aa16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 LDLRAP1Q5SW96 308 aa16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 GLB1L3Q8NCI6 653 aaPredicted RBP16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 PEX13Q92968 403 aa16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 CCDC106Q9BWC9 280 aa16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 OR2AG1Q9H205 316 aa16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 CCDC177Q9NQR7 707 aaPredicted RBP16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 RAB23Q9ULC3 237 aa16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 BACE2Q9Y5Z0 518 aa16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 PITPNM1O00562 1244 aa16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 WNT9AO14904 365 aa16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 DEFA1P59665 94 aa16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 DEFA3P59666 94 aa16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 NFKB2Q00653 900 aa16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 PHF10Q8WUB8 498 aaKnown RBP16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 OLFM1Q99784 485 aa16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 DHRS4Q9BTZ2 278 aa16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 COQ10BQ9H8M1 238 aa16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 CDV3Q9UKY7 258 aaKnown RBP16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 IL6P05231 212 aa16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 TYRP14679 529 aa16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 TNNI3P19429 210 aa16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 ST13P50502 369 aaKnown RBP16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 TGFBIQ15582 683 aa16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 RFX4Q33E94 735 aa16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 RAB41Q5JT25 222 aa16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 LY6G5CQ5SRR4 150 aa16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 BRAT1Q6PJG6 821 aa16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 OR14C36Q8NHC7 312 aa16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 ASB9Q96DX5 294 aa16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 PCDHGA11Q9Y5H2 935 aa16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 DNAJA2O60884 412 aa16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 ITGA2P17301 1181 aa16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 UBE3AQ05086 875 aa16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 CCNYL2Q5T2Q4 361 aa16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 KIAA0319Q5VV43 1072 aa16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 CYP2U1Q7Z449 544 aa16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 OR4F6Q8NGB9 312 aa16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 WFIKKN2Q8TEU8 576 aa16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 LRRC58Q96CX6 371 aa16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 RANBP9Q96S59 729 aa16.3■□□□□ 0.2
PPP1CB-202ENST00000358506 DHRS4L1P0CG22 281 aa16.29■□□□□ 0.2
PPP1CB-202ENST00000358506 CYP4B1P13584 511 aa16.29■□□□□ 0.2
PPP1CB-202ENST00000358506 RPL26P61254 145 aaKnown RBP16.29■□□□□ 0.2
PPP1CB-202ENST00000358506 NCF4Q15080 339 aa16.29■□□□□ 0.2
PPP1CB-202ENST00000358506 PNPLA1Q8N8W4 532 aa16.29■□□□□ 0.2
PPP1CB-202ENST00000358506 TRPV1Q8NER1 839 aa16.29■□□□□ 0.2
PPP1CB-202ENST00000358506 NAT14Q8WUY8 206 aa16.29■□□□□ 0.2
PPP1CB-202ENST00000358506 COL24A1Q17RW2 1714 aa16.29■□□□□ 0.2
PPP1CB-202ENST00000358506 TLX1P31314 330 aaPredicted RBP16.29■□□□□ 0.2
PPP1CB-202ENST00000358506 RFC2P35250 354 aa16.29■□□□□ 0.2
PPP1CB-202ENST00000358506 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.29■□□□□ 0.21e-6■□□□□ 9
PPP1CB-202ENST00000358506 TADA1Q96BN2 335 aa16.29■□□□□ 0.2
PPP1CB-202ENST00000358506 SLC27A6Q9Y2P4 619 aa16.29■□□□□ 0.2
PPP1CB-202ENST00000358506 PHIPQ8WWQ0 1821 aa16.29■□□□□ 0.2
PPP1CB-202ENST00000358506 MTHFD1P11586 935 aaKnown RBP16.29■□□□□ 0.2
PPP1CB-202ENST00000358506 AGTR2P50052 363 aa16.29■□□□□ 0.2
PPP1CB-202ENST00000358506 SPIBQ01892 262 aa16.29■□□□□ 0.2
PPP1CB-202ENST00000358506 SLC22A17Q8WUG5 538 aa16.29■□□□□ 0.2
PPP1CB-202ENST00000358506 NACC2Q96BF6 587 aa16.29■□□□□ 0.2
PPP1CB-202ENST00000358506 ZFYVE19Q96K21 471 aa16.29■□□□□ 0.2
PPP1CB-202ENST00000358506 RPS6KB2Q9UBS0 482 aa16.29■□□□□ 0.2
PPP1CB-202ENST00000358506 SDHDO14521 159 aa16.29■□□□□ 0.2
PPP1CB-202ENST00000358506 DYRK3O43781 588 aa16.29■□□□□ 0.2
PPP1CB-202ENST00000358506 PGLSO95336 258 aa16.29■□□□□ 0.2
PPP1CB-202ENST00000358506 SOX6P35712 828 aa16.29■□□□□ 0.2
PPP1CB-202ENST00000358506 RPS9P46781 194 aaKnown RBP16.29■□□□□ 0.2
PPP1CB-202ENST00000358506 TM4SF4P48230 202 aa16.29■□□□□ 0.2
PPP1CB-202ENST00000358506 DGKQP52824 942 aa16.29■□□□□ 0.2
PPP1CB-202ENST00000358506 TRAP1Q12931 704 aaKnown RBP16.29■□□□□ 0.2
PPP1CB-202ENST00000358506 PPP1R3AQ16821 1122 aa16.29■□□□□ 0.2
PPP1CB-202ENST00000358506 BNIPLQ7Z465 357 aa16.29■□□□□ 0.2
PPP1CB-202ENST00000358506 GRASPQ7Z6J2 395 aaPredicted RBP16.29■□□□□ 0.2
PPP1CB-202ENST00000358506 CDK20Q8IZL9 346 aa16.29■□□□□ 0.2
PPP1CB-202ENST00000358506 CANT1Q8WVQ1 401 aa16.29■□□□□ 0.2
PPP1CB-202ENST00000358506 POPDC3Q9HBV1 291 aa16.29■□□□□ 0.2
PPP1CB-202ENST00000358506 SMPD3Q9NY59 655 aaPredicted RBP16.29■□□□□ 0.2
PPP1CB-202ENST00000358506 B4GALT6Q9UBX8 382 aa16.29■□□□□ 0.2
PPP1CB-202ENST00000358506 SNNO75324 88 aaPredicted RBP16.28■□□□□ 0.2
PPP1CB-202ENST00000358506 SERPINB1P30740 379 aa16.28■□□□□ 0.2
PPP1CB-202ENST00000358506 SLC7A1P30825 629 aa16.28■□□□□ 0.2
PPP1CB-202ENST00000358506 TYW3Q6IPR3 259 aaKnown RBP16.28■□□□□ 0.2
PPP1CB-202ENST00000358506 ERICH5Q6P6B1 374 aa16.28■□□□□ 0.2
PPP1CB-202ENST00000358506 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.28■□□□□ 0.2
PPP1CB-202ENST00000358506 LEMD2Q8NC56 503 aa16.28■□□□□ 0.2
PPP1CB-202ENST00000358506 RAD51AP1Q96B01 352 aa16.28■□□□□ 0.2
PPP1CB-202ENST00000358506 CHID1Q9BWS9 393 aa16.28■□□□□ 0.2
PPP1CB-202ENST00000358506 SLC32A1Q9H598 525 aa16.28■□□□□ 0.2
PPP1CB-202ENST00000358506 RHBDL2Q9NX52 303 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms