RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 PRKAB1Q9Y478 270 aa14.24□□□□□ -0.13
NIPAL3-202ENST00000339255 CACNA1HO95180 2353 aa14.24□□□□□ -0.13
NIPAL3-202ENST00000339255 CUL9Q8IWT3 2517 aa14.24□□□□□ -0.13
NIPAL3-202ENST00000339255 PRR33A8MZF0 331 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 TARM1B6A8C7 271 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 TLR4O00206 839 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 SLC16A5O15375 505 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 MATN4O95460 622 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 SLC35G4P0C7Q5 338 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 CPA3P15088 417 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 MDH1P40925 334 aaKnown RBP14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 CLCNKAP51800 687 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 HK3P52790 923 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 ASPHQ12797 758 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 FZD2Q14332 565 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 NFE2L1Q14494 772 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 PLA2G4EQ3MJ16 856 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 PLK5Q496M5 336 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 C16orf46Q6P387 395 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 ZYG11AQ6WRX3 759 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 CEP68Q76N32 757 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 CHST15Q7LFX5 561 aaPredicted RBP14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 RABEPKQ7Z6M1 372 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 TMEM151AQ8N4L1 468 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 PAIP2Q9BPZ3 127 aaKnown RBP14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 C12orf65Q9H3J6 166 aaKnown RBP14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 MRPL40Q9NQ50 206 aaKnown RBP14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 GPSM3Q9Y4H4 160 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 PCYT1BQ9Y5K3 369 aaPredicted RBP14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 PABPN1LA6NDY0 278 aaKnown RBP14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 NPEPPSL1A6NEC2 478 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 PRR19A6NJB7 356 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 GPR37L1O60883 481 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 MAOBP27338 520 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 PREPP48147 710 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 DHPSP49366 369 aaPredicted RBP14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 ILF3Q12906 894 aaKnown RBP eCLIP14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 OR4D1Q15615 310 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 CDKL4Q5MAI5 379 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 SBSNQ6UWP8 590 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 NAPRTQ6XQN6 538 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 FRA10AC1Q70Z53 315 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 ARMCX6Q7L4S7 300 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 PDZD3Q86UT5 571 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 GPSM1Q86YR5 675 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 HID1Q8IV36 788 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 VRK3Q8IV63 474 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 SLC22A9Q8IVM8 553 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 TRIM42Q8IWZ5 723 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 RAB3IL1Q8TBN0 382 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 ASB11Q8WXH4 323 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 ATOH8Q96SQ7 321 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 TRIM54Q9BYV2 358 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 UNKQ9C0B0 810 aaKnown RBP14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 OR52A5Q9H2C5 316 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 RDH14Q9HBH5 336 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 TM7SF3Q9NS93 570 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 KLC4Q9NSK0 619 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 CPSF2Q9P2I0 782 aaKnown RBP14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 SLC23A2Q9UGH3 650 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 SLCO1B1Q9Y6L6 691 aa14.23□□□□□ -0.13
NIPAL3-202ENST00000339255 A0A1B0GTW7 788 aa14.22□□□□□ -0.13
NIPAL3-202ENST00000339255 GFYI3L273 518 aa14.22□□□□□ -0.13
NIPAL3-202ENST00000339255 CDC7O00311 574 aa14.22□□□□□ -0.13
NIPAL3-202ENST00000339255 HRO43593 1189 aa14.22□□□□□ -0.13
NIPAL3-202ENST00000339255 SMIM24O75264 130 aa14.22□□□□□ -0.13
NIPAL3-202ENST00000339255 H2AFYO75367 372 aaKnown RBP14.22□□□□□ -0.13
NIPAL3-202ENST00000339255 TNFP01375 233 aa14.22□□□□□ -0.13
NIPAL3-202ENST00000339255 CATP04040 527 aaKnown RBP14.22□□□□□ -0.13
NIPAL3-202ENST00000339255 WNT1P04628 370 aa14.22□□□□□ -0.13
NIPAL3-202ENST00000339255 RPN2P04844 631 aa14.22□□□□□ -0.13
NIPAL3-202ENST00000339255 BPGMP07738 259 aa14.22□□□□□ -0.13
NIPAL3-202ENST00000339255 TPBGLP0DKB5 382 aa14.22□□□□□ -0.13
NIPAL3-202ENST00000339255 IDSP22304 550 aa14.22□□□□□ -0.13
NIPAL3-202ENST00000339255 ITPKAP23677 461 aa14.22□□□□□ -0.13
NIPAL3-202ENST00000339255 ATP5F1P24539 256 aaPredicted RBP14.22□□□□□ -0.13
NIPAL3-202ENST00000339255 PRKAA2P54646 552 aa14.22□□□□□ -0.13
NIPAL3-202ENST00000339255 AP1S2P56377 157 aa14.22□□□□□ -0.13
NIPAL3-202ENST00000339255 C21orf59P57076 290 aa14.22□□□□□ -0.13
NIPAL3-202ENST00000339255 IRX4P78413 519 aa14.22□□□□□ -0.13
NIPAL3-202ENST00000339255 NFKB2Q00653 900 aa14.22□□□□□ -0.13
NIPAL3-202ENST00000339255 PCLAFQ15004 111 aa14.22□□□□□ -0.13
NIPAL3-202ENST00000339255 PPP1R3AQ16821 1122 aa14.22□□□□□ -0.13
NIPAL3-202ENST00000339255 UNC5DQ6UXZ4 953 aa14.22□□□□□ -0.13
NIPAL3-202ENST00000339255 CYHR1Q6ZMK1 362 aa14.22□□□□□ -0.13
NIPAL3-202ENST00000339255 FAM83HQ6ZRV2 1179 aaPredicted RBP14.22□□□□□ -0.13
NIPAL3-202ENST00000339255 TAX1BP1Q86VP1 789 aa14.22□□□□□ -0.13
NIPAL3-202ENST00000339255 TSACCQ96A04 125 aaPredicted RBP14.22□□□□□ -0.13
NIPAL3-202ENST00000339255 SLC12A9Q9BXP2 914 aa14.22□□□□□ -0.13
NIPAL3-202ENST00000339255 OSGEPL1Q9H4B0 414 aa14.22□□□□□ -0.13
NIPAL3-202ENST00000339255 PARVBQ9HBI1 364 aa14.22□□□□□ -0.13
NIPAL3-202ENST00000339255 MLXIPLQ9NP71 852 aa14.22□□□□□ -0.13
NIPAL3-202ENST00000339255 SIRPGQ9P1W8 387 aa14.22□□□□□ -0.13
NIPAL3-202ENST00000339255 DNAJC16Q9Y2G8 782 aa14.22□□□□□ -0.13
NIPAL3-202ENST00000339255 OARD1Q9Y530 152 aa14.22□□□□□ -0.13
NIPAL3-202ENST00000339255 G3V2L1 256 aa14.21□□□□□ -0.13
NIPAL3-202ENST00000339255 IFRD1O00458 451 aaPredicted RBP14.21□□□□□ -0.13
NIPAL3-202ENST00000339255 GALR2O43603 387 aaPredicted RBP14.21□□□□□ -0.13
NIPAL3-202ENST00000339255 PSIP1O75475 530 aaKnown RBP14.21□□□□□ -0.13
NIPAL3-202ENST00000339255 SBK3P0C264 359 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms