RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 FBXW8Q8N3Y1 598 aa14.65□□□□□ -0.06
TPM3-205ENST00000328159 BEND7Q8N7W2 519 aaPredicted RBP14.65□□□□□ -0.06
TPM3-205ENST00000328159 DCBLD1Q8N8Z6 715 aa14.65□□□□□ -0.06
TPM3-205ENST00000328159 RASGEF1AQ8N9B8 481 aa14.65□□□□□ -0.06
TPM3-205ENST00000328159 SKA2Q8WVK7 121 aaPredicted RBP14.65□□□□□ -0.06
TPM3-205ENST00000328159 ASB11Q8WXH4 323 aa14.65□□□□□ -0.06
TPM3-205ENST00000328159 STMN2Q93045 179 aa14.65□□□□□ -0.06
TPM3-205ENST00000328159 NUS1Q96E22 293 aa14.65□□□□□ -0.06
TPM3-205ENST00000328159 ACOX2Q99424 681 aa14.65□□□□□ -0.06
TPM3-205ENST00000328159 NPAS2Q99743 824 aa14.65□□□□□ -0.06
TPM3-205ENST00000328159 CCT7Q99832 543 aa14.65□□□□□ -0.06
TPM3-205ENST00000328159 SLC12A9Q9BXP2 914 aa14.65□□□□□ -0.06
TPM3-205ENST00000328159 TRIM54Q9BYV2 358 aa14.65□□□□□ -0.06
TPM3-205ENST00000328159 ARL15Q9NXU5 204 aa14.65□□□□□ -0.06
TPM3-205ENST00000328159 CACNA2D2Q9NY47 1150 aa14.65□□□□□ -0.06
TPM3-205ENST00000328159 CCDC167Q9P0B6 97 aa14.65□□□□□ -0.06
TPM3-205ENST00000328159 ST14Q9Y5Y6 855 aa14.65□□□□□ -0.06
TPM3-205ENST00000328159 K7EPI3 171 aa14.64□□□□□ -0.07
TPM3-205ENST00000328159 INPP4BO15327 924 aa14.64□□□□□ -0.07
TPM3-205ENST00000328159 SLC16A5O15375 505 aa14.64□□□□□ -0.07
TPM3-205ENST00000328159 MMP20O60882 483 aa14.64□□□□□ -0.07
TPM3-205ENST00000328159 KRT36O76013 467 aa14.64□□□□□ -0.07
TPM3-205ENST00000328159 RECQL5O94762 991 aaPredicted RBP14.64□□□□□ -0.07
TPM3-205ENST00000328159 CAPN1P07384 714 aa14.64□□□□□ -0.07
TPM3-205ENST00000328159 SNRPB2P08579 225 aaKnown RBP14.64□□□□□ -0.07
TPM3-205ENST00000328159 C6P13671 934 aa14.64□□□□□ -0.07
TPM3-205ENST00000328159 GDF5P43026 501 aa14.64□□□□□ -0.07
TPM3-205ENST00000328159 PSMD8P48556 350 aa14.64□□□□□ -0.07
TPM3-205ENST00000328159 RPIAP49247 311 aa14.64□□□□□ -0.07
TPM3-205ENST00000328159 CCNG1P51959 295 aa14.64□□□□□ -0.07
TPM3-205ENST00000328159 CTSCP53634 463 aa14.64□□□□□ -0.07
TPM3-205ENST00000328159 ACTR3P61158 418 aa14.64□□□□□ -0.07
TPM3-205ENST00000328159 CDKL1Q00532 357 aa14.64□□□□□ -0.07
TPM3-205ENST00000328159 SP140Q13342 867 aa14.64□□□□□ -0.07
TPM3-205ENST00000328159 PREPLQ4J6C6 727 aaPredicted RBP14.64□□□□□ -0.07
TPM3-205ENST00000328159 TCHHL1Q5QJ38 904 aaPredicted RBP14.64□□□□□ -0.07
TPM3-205ENST00000328159 PAOXQ6QHF9 649 aa14.64□□□□□ -0.07
TPM3-205ENST00000328159 SCIMPQ6UWF3 145 aa14.64□□□□□ -0.07
TPM3-205ENST00000328159 SPATA19Q7Z5L4 167 aa14.64□□□□□ -0.07
TPM3-205ENST00000328159 MILR1Q7Z6M3 343 aa14.64□□□□□ -0.07
TPM3-205ENST00000328159 PGAM4Q8N0Y7 254 aa14.64□□□□□ -0.07
TPM3-205ENST00000328159 SNX31Q8N9S9 440 aa14.64□□□□□ -0.07
TPM3-205ENST00000328159 CFAP61Q8NHU2 1237 aa14.64□□□□□ -0.07
TPM3-205ENST00000328159 METTL6Q8TCB7 284 aa14.64□□□□□ -0.07
TPM3-205ENST00000328159 ASZ1Q8WWH4 475 aa14.64□□□□□ -0.07
TPM3-205ENST00000328159 RIPOR3Q96MK2 946 aa14.64□□□□□ -0.07
TPM3-205ENST00000328159 TRMT61BQ9BVS5 477 aaKnown RBP14.64□□□□□ -0.07
TPM3-205ENST00000328159 MRPL1Q9BYD6 325 aaKnown RBP14.64□□□□□ -0.07
TPM3-205ENST00000328159 PARVBQ9HBI1 364 aa14.64□□□□□ -0.07
TPM3-205ENST00000328159 RIC8BQ9NVN3 520 aa14.64□□□□□ -0.07
TPM3-205ENST00000328159 LZTS3O60299 673 aaPredicted RBP14.63□□□□□ -0.07
TPM3-205ENST00000328159 KATNA1O75449 491 aa14.63□□□□□ -0.07
TPM3-205ENST00000328159 STK16O75716 305 aa14.63□□□□□ -0.07
TPM3-205ENST00000328159 PRLHRP49683 370 aa14.63□□□□□ -0.07
TPM3-205ENST00000328159 MTTPP55157 894 aa14.63□□□□□ -0.07
TPM3-205ENST00000328159 IRX1P78414 480 aaPredicted RBP14.63□□□□□ -0.07
TPM3-205ENST00000328159 TMEM115Q12893 351 aaPredicted RBP14.63□□□□□ -0.07
TPM3-205ENST00000328159 GSTA3Q16772 222 aa14.63□□□□□ -0.07
TPM3-205ENST00000328159 TTC23LQ6PF05 361 aa14.63□□□□□ -0.07
TPM3-205ENST00000328159 BNC2Q6ZN30 1099 aaPredicted RBP14.63□□□□□ -0.07
TPM3-205ENST00000328159 MIER2Q8N344 545 aa14.63□□□□□ -0.07
TPM3-205ENST00000328159 TCAIMQ8N3R3 496 aa14.63□□□□□ -0.07
TPM3-205ENST00000328159 CHCHD4Q8N4Q1 142 aa14.63□□□□□ -0.07
TPM3-205ENST00000328159 EFCAB3Q8N7B9 438 aa14.63□□□□□ -0.07
TPM3-205ENST00000328159 OR9I1Q8NGQ6 314 aa14.63□□□□□ -0.07
TPM3-205ENST00000328159 OR2T11Q8NH01 316 aa14.63□□□□□ -0.07
TPM3-205ENST00000328159 ERLEC1Q96DZ1 483 aa14.63□□□□□ -0.07
TPM3-205ENST00000328159 RPP25Q9BUL9 199 aaKnown RBP14.63□□□□□ -0.07
TPM3-205ENST00000328159 SLC25A23Q9BV35 468 aa14.63□□□□□ -0.07
TPM3-205ENST00000328159 HDAC8Q9BY41 377 aa14.63□□□□□ -0.07
TPM3-205ENST00000328159 WDR41Q9HAD4 459 aa14.63□□□□□ -0.07
TPM3-205ENST00000328159 NOP53Q9NZM5 478 aaKnown RBP14.63□□□□□ -0.07
TPM3-205ENST00000328159 CNOT6Q9ULM6 557 aaKnown RBP14.63□□□□□ -0.07
TPM3-205ENST00000328159 PABPN1LA6NDY0 278 aaKnown RBP14.62□□□□□ -0.07
TPM3-205ENST00000328159 GFYI3L273 518 aa14.62□□□□□ -0.07
TPM3-205ENST00000328159 TSPAN6O43657 245 aa14.62□□□□□ -0.07
TPM3-205ENST00000328159 ATG13O75143 517 aa14.62□□□□□ -0.07
TPM3-205ENST00000328159 TBX10O75333 385 aa14.62□□□□□ -0.07
TPM3-205ENST00000328159 SORBS2O94875 1100 aaKnown RBP14.62□□□□□ -0.07
TPM3-205ENST00000328159 SLCO2B1O94956 709 aa14.62□□□□□ -0.07
TPM3-205ENST00000328159 SOD1P00441 154 aa14.62□□□□□ -0.07
TPM3-205ENST00000328159 HIST1H2AGP0C0S8 130 aaPredicted RBP14.62□□□□□ -0.07
TPM3-205ENST00000328159 IDO1P14902 403 aa14.62□□□□□ -0.07
TPM3-205ENST00000328159 HIST1H2ADP20671 130 aa14.62□□□□□ -0.07
TPM3-205ENST00000328159 CYP2A7P20853 494 aa14.62□□□□□ -0.07
TPM3-205ENST00000328159 HMOX2P30519 316 aa14.62□□□□□ -0.07
TPM3-205ENST00000328159 GGT5P36269 586 aa14.62□□□□□ -0.07
TPM3-205ENST00000328159 P2RY2P41231 377 aa14.62□□□□□ -0.07
TPM3-205ENST00000328159 PIK3CGP48736 1102 aa14.62□□□□□ -0.07
TPM3-205ENST00000328159 HTR6P50406 440 aa14.62□□□□□ -0.07
TPM3-205ENST00000328159 CREB5Q02930 508 aa14.62□□□□□ -0.07
TPM3-205ENST00000328159 DLX2Q07687 328 aaPredicted RBP14.62□□□□□ -0.07
TPM3-205ENST00000328159 RCN1Q15293 331 aa14.62□□□□□ -0.07
TPM3-205ENST00000328159 FAM46CQ5VWP2 391 aa14.62□□□□□ -0.07
TPM3-205ENST00000328159 REP15Q6BDI9 236 aa14.62□□□□□ -0.07
TPM3-205ENST00000328159 NUDT18Q6ZVK8 323 aa14.62□□□□□ -0.07
TPM3-205ENST00000328159 HPS6Q86YV9 775 aa14.62□□□□□ -0.07
TPM3-205ENST00000328159 FUNDC1Q8IVP5 155 aa14.62□□□□□ -0.07
TPM3-205ENST00000328159 RAB7BQ96AH8 199 aa14.62□□□□□ -0.07
TPM3-205ENST00000328159 HIST1H2AHQ96KK5 128 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms