RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 PPATQ06203 517 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 IDNKQ5T6J7 187 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 SNX33Q8WV41 574 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 TATDN2Q93075 761 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 FUNDC2Q9BWH2 189 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 RTFDC1Q9BY42 306 aaPredicted RBP9.61□□□□□ -0.87
COL12A1-201ENST00000322507 UGT1A7Q9HAW7 530 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 UGT1A10Q9HAW8 530 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 UGT1A8Q9HAW9 530 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 CDH5P33151 784 aaPredicted RBP9.61□□□□□ -0.87
COL12A1-201ENST00000322507 SRSF11Q05519 484 aaKnown RBP9.61□□□□□ -0.87
COL12A1-201ENST00000322507 BTBD16Q32M84 506 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 ADNP2Q6IQ32 1131 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 CERS6Q6ZMG9 384 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 C19orf35Q6ZS72 473 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 IDI2Q9BXS1 227 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 NINJ2Q9NZG7 142 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 ZNF69Q9UC07 566 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 AP4B1Q9Y6B7 739 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 SNX3O60493 162 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 CXCL8P10145 99 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 CCNB1P14635 433 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 RANP62826 216 aaKnown RBP9.61□□□□□ -0.87
COL12A1-201ENST00000322507 NRF1Q16656 503 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 PFKFB4Q16877 469 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 FAXCQ5TGI0 409 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 NATD1Q8N6N6 113 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 OR4Q3Q8NH05 313 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 SUSD6Q92537 303 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 SLC34A2O95436 690 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 STAG3L2P0CL84 134 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 ADH6P28332 368 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 NTRK3Q16288 839 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 BCL2A1Q16548 175 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 ING5Q8WYH8 240 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 RSL1D1O76021 490 aaKnown RBP9.61□□□□□ -0.87
COL12A1-201ENST00000322507 TMEM192Q8IY95 271 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 C12orf45Q8N5I9 185 aaPredicted RBP9.61□□□□□ -0.87
COL12A1-201ENST00000322507 TMEM104Q8NE00 496 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 FATE1Q969F0 183 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 CDC6Q99741 560 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 QRSL1Q9H0R6 528 aaKnown RBP9.61□□□□□ -0.87
COL12A1-201ENST00000322507 IL1RAPQ9NPH3 570 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 AK6Q9Y3D8 172 aaKnown RBP9.61□□□□□ -0.87
COL12A1-201ENST00000322507 DIDO1Q9BTC0 2240 aaKnown RBP9.61□□□□□ -0.87
COL12A1-201ENST00000322507 DPPA5A6NC42 116 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 CLCN3P51790 818 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 BIDP55957 195 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 ZNF674Q2M3X9 581 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 PLEKHN1Q494U1 663 aaPredicted RBP9.61□□□□□ -0.87
COL12A1-201ENST00000322507 SPATS1Q496A3 300 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 KRBOX4Q5JUW0 171 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 PLPPR4Q7Z2D5 763 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 TSPAN33Q86UF1 283 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 ARMC10Q8N2F6 343 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 PHTF2Q8N3S3 785 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 TESCQ96BS2 214 aa9.61□□□□□ -0.87
COL12A1-201ENST00000322507 YBX3P16989 372 aaKnown RBP eCLIP9.6□□□□□ -0.87
COL12A1-201ENST00000322507 BBS12Q6ZW61 710 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 NACC2Q96BF6 587 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 DNAJC18Q9H819 358 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 LCHNA4D1U4 455 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 A8MVJ9 347 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 ASLP04424 464 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 CDH1P12830 882 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 BEST4Q8NFU0 473 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 SEZ6LQ9BYH1 1024 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 MYO7AQ13402 2215 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 ADAMDEC1O15204 470 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 BRCC3P46736 316 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 GTF2BQ00403 316 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 AMHR2Q16671 573 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 NR4A3Q92570 626 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 ZNF780BQ9Y6R6 833 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 TNS2Q63HR2 1409 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 M0R129 80 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 NUDT14O95848 222 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 APOC3P02656 99 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 RFX3P48380 749 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 FABP6P51161 128 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 LAPTM5Q13571 262 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 GJB7Q6PEY0 223 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 PAQR7Q86WK9 346 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 OR7G1Q8NGA0 311 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 THUMPD1Q9NXG2 353 aaKnown RBP9.6□□□□□ -0.87
COL12A1-201ENST00000322507 MAP2K7O14733 419 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 ANXA3P12429 323 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 IRF8Q02556 426 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 PARP15Q460N3 678 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 TIGD3Q6B0B8 471 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 ZNF705GA8MUZ8 300 aaPredicted RBP9.6□□□□□ -0.87
COL12A1-201ENST00000322507 DDX3XO00571 662 aaKnown RBP eCLIP9.6□□□□□ -0.87
COL12A1-201ENST00000322507 SLC22A3O75751 556 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 GRIA3P42263 894 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 CRATP43155 626 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 ATXN7L2Q5T6C5 722 aaPredicted RBP9.6□□□□□ -0.87
COL12A1-201ENST00000322507 SLC2A14Q8TDB8 520 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 ARL11Q969Q4 196 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 TKTL2Q9H0I9 626 aa9.6□□□□□ -0.87
COL12A1-201ENST00000322507 PCBD2Q9H0N5 130 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms