RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 CD248Q9HCU0 757 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 EPS15L1Q9UBC2 864 aa14□□□□□ -0.17
C9orf3-202ENST00000297979 LOC100653049A0A140TA62 436 aa13.99□□□□□ -0.17
C9orf3-202ENST00000297979 OR2AG2A6NM03 316 aa13.99□□□□□ -0.17
C9orf3-202ENST00000297979 PIP5K1BO14986 540 aa13.99□□□□□ -0.17
C9orf3-202ENST00000297979 KRT34O76011 436 aa13.99□□□□□ -0.17
C9orf3-202ENST00000297979 MPC1LP0DKB6 136 aa13.99□□□□□ -0.17
C9orf3-202ENST00000297979 P2RY2P41231 377 aa13.99□□□□□ -0.17
C9orf3-202ENST00000297979 COL19A1Q14993 1142 aa13.99□□□□□ -0.17
C9orf3-202ENST00000297979 C18orf21Q32NC0 220 aaPredicted RBP13.99□□□□□ -0.17
C9orf3-202ENST00000297979 GPRIN3Q6ZVF9 776 aa13.99□□□□□ -0.17
C9orf3-202ENST00000297979 CSGALNACT1Q8TDX6 532 aa13.99□□□□□ -0.17
C9orf3-202ENST00000297979 NECTIN4Q96NY8 510 aa13.99□□□□□ -0.17
C9orf3-202ENST00000297979 WWOXQ9NZC7 414 aa13.99□□□□□ -0.17
C9orf3-202ENST00000297979 TICRRQ7Z2Z1 1910 aa13.99□□□□□ -0.17
C9orf3-202ENST00000297979 UBDO15205 165 aa13.99□□□□□ -0.17
C9orf3-202ENST00000297979 INPP4BO15327 924 aa13.99□□□□□ -0.17
C9orf3-202ENST00000297979 LZTS3O60299 673 aaPredicted RBP13.99□□□□□ -0.17
C9orf3-202ENST00000297979 MMP20O60882 483 aa13.99□□□□□ -0.17
C9orf3-202ENST00000297979 C8GP07360 202 aa13.99□□□□□ -0.17
C9orf3-202ENST00000297979 THRAP10827 490 aa13.99□□□□□ -0.17
C9orf3-202ENST00000297979 PRDX3P30048 256 aaKnown RBP13.99□□□□□ -0.17
C9orf3-202ENST00000297979 HNRNPH1P31943 449 aaKnown RBP13.99□□□□□ -0.17
C9orf3-202ENST00000297979 CPOXP36551 454 aa13.99□□□□□ -0.17
C9orf3-202ENST00000297979 PGM1P36871 562 aa13.99□□□□□ -0.17
C9orf3-202ENST00000297979 PKNOX1P55347 436 aa13.99□□□□□ -0.17
C9orf3-202ENST00000297979 CREB5Q02930 508 aa13.99□□□□□ -0.17
C9orf3-202ENST00000297979 HTR4Q13639 388 aa13.99□□□□□ -0.17
C9orf3-202ENST00000297979 LARP4Q71RC2 724 aaKnown RBP eCLIP13.99□□□□□ -0.17
C9orf3-202ENST00000297979 EFL1Q7Z2Z2 1120 aaKnown RBP13.99□□□□□ -0.17
C9orf3-202ENST00000297979 GOLGA7Q7Z5G4 137 aa13.99□□□□□ -0.17
C9orf3-202ENST00000297979 DDIASQ8IXT1 998 aa13.99□□□□□ -0.17
C9orf3-202ENST00000297979 RASGEF1AQ8N9B8 481 aa13.99□□□□□ -0.17
C9orf3-202ENST00000297979 UBTD2Q8WUN7 234 aa13.99□□□□□ -0.17
C9orf3-202ENST00000297979 ELMO1Q92556 727 aa13.99□□□□□ -0.17
C9orf3-202ENST00000297979 RHBDF1Q96CC6 855 aa13.99□□□□□ -0.17
C9orf3-202ENST00000297979 C3orf30Q96M34 536 aa13.99□□□□□ -0.17
C9orf3-202ENST00000297979 BAIAP2L1Q9UHR4 511 aa13.99□□□□□ -0.17
C9orf3-202ENST00000297979 ZNF225Q9UK10 706 aa13.99□□□□□ -0.17
C9orf3-202ENST00000297979 ATP6AP2A0A1C7CYW4 349 aa13.98□□□□□ -0.17
C9orf3-202ENST00000297979 NPC1O15118 1278 aa13.98□□□□□ -0.17
C9orf3-202ENST00000297979 TAPBPO15533 448 aa13.98□□□□□ -0.17
C9orf3-202ENST00000297979 GPC4O75487 556 aa13.98□□□□□ -0.17
C9orf3-202ENST00000297979 ATP6AP2O75787 350 aa13.98□□□□□ -0.17
C9orf3-202ENST00000297979 SOD1P00441 154 aa13.98□□□□□ -0.17
C9orf3-202ENST00000297979 ENO2P09104 434 aaPredicted RBP13.98□□□□□ -0.17
C9orf3-202ENST00000297979 UROSP10746 265 aa13.98□□□□□ -0.17
C9orf3-202ENST00000297979 WASP42768 502 aa13.98□□□□□ -0.17
C9orf3-202ENST00000297979 HSPA7P48741 367 aa13.98□□□□□ -0.17
C9orf3-202ENST00000297979 GALK1P51570 392 aa13.98□□□□□ -0.17
C9orf3-202ENST00000297979 CNTN1Q12860 1018 aa13.98□□□□□ -0.17
C9orf3-202ENST00000297979 CDC16Q13042 620 aa13.98□□□□□ -0.17
C9orf3-202ENST00000297979 GTF2H2Q13888 395 aa13.98□□□□□ -0.17
C9orf3-202ENST00000297979 SQLEQ14534 574 aa13.98□□□□□ -0.17
C9orf3-202ENST00000297979 HERC3Q15034 1050 aa13.98□□□□□ -0.17
C9orf3-202ENST00000297979 SNCBQ16143 134 aa13.98□□□□□ -0.17
C9orf3-202ENST00000297979 GTF2H2CQ6P1K8 395 aa13.98□□□□□ -0.17
C9orf3-202ENST00000297979 BEND7Q8N7W2 519 aaPredicted RBP13.98□□□□□ -0.17
C9orf3-202ENST00000297979 SMRP1Q8NCR6 262 aa13.98□□□□□ -0.17
C9orf3-202ENST00000297979 RP9Q8TA86 221 aaKnown RBP13.98□□□□□ -0.17
C9orf3-202ENST00000297979 CXorf40AQ8TE69 158 aa13.98□□□□□ -0.17
C9orf3-202ENST00000297979 SKA2Q8WVK7 121 aaPredicted RBP13.98□□□□□ -0.17
C9orf3-202ENST00000297979 P2RY13Q9BPV8 354 aa13.98□□□□□ -0.17
C9orf3-202ENST00000297979 TUBB1Q9H4B7 451 aa13.98□□□□□ -0.17
C9orf3-202ENST00000297979 DYTNA2CJ06 578 aa13.98□□□□□ -0.17
C9orf3-202ENST00000297979 CHEK2O96017 543 aa13.98□□□□□ -0.17
C9orf3-202ENST00000297979 TNFRSF4P43489 277 aa13.98□□□□□ -0.17
C9orf3-202ENST00000297979 TMEM115Q12893 351 aaPredicted RBP13.98□□□□□ -0.17
C9orf3-202ENST00000297979 SP140Q13342 867 aa13.98□□□□□ -0.17
C9orf3-202ENST00000297979 CUL3Q13618 768 aa13.98□□□□□ -0.17
C9orf3-202ENST00000297979 NEK10Q6ZWH5 1172 aa13.98□□□□□ -0.17
C9orf3-202ENST00000297979 UBE2R2Q712K3 238 aaPredicted RBP13.98□□□□□ -0.17
C9orf3-202ENST00000297979 SNX32Q86XE0 403 aa13.98□□□□□ -0.17
C9orf3-202ENST00000297979 VRK3Q8IV63 474 aa13.98□□□□□ -0.17
C9orf3-202ENST00000297979 ASZ1Q8WWH4 475 aa13.98□□□□□ -0.17
C9orf3-202ENST00000297979 TMEM79Q9BSE2 394 aa13.98□□□□□ -0.17
C9orf3-202ENST00000297979 RTKNQ9BST9 563 aa13.98□□□□□ -0.17
C9orf3-202ENST00000297979 NOL11Q9H8H0 719 aaKnown RBP13.98□□□□□ -0.17
C9orf3-202ENST00000297979 BTRCQ9Y297 605 aa13.98□□□□□ -0.17
C9orf3-202ENST00000297979 TIMM22Q9Y584 194 aa13.98□□□□□ -0.17
C9orf3-202ENST00000297979 FADS3Q9Y5Q0 445 aa13.98□□□□□ -0.17
C9orf3-202ENST00000297979 PTGDR2Q9Y5Y4 395 aa13.98□□□□□ -0.17
C9orf3-202ENST00000297979 MTCH2Q9Y6C9 303 aa13.98□□□□□ -0.17
C9orf3-202ENST00000297979 ATG13O75143 517 aa13.97□□□□□ -0.17
C9orf3-202ENST00000297979 ANXA5P08758 320 aa13.97□□□□□ -0.17
C9orf3-202ENST00000297979 PRLHRP49683 370 aa13.97□□□□□ -0.17
C9orf3-202ENST00000297979 CTSCP53634 463 aa13.97□□□□□ -0.17
C9orf3-202ENST00000297979 DPTQ07507 201 aa13.97□□□□□ -0.17
C9orf3-202ENST00000297979 CAMK2GQ13555 558 aaPredicted RBP13.97□□□□□ -0.17
C9orf3-202ENST00000297979 CDKL4Q5MAI5 379 aa13.97□□□□□ -0.17
C9orf3-202ENST00000297979 PIP5KL1Q5T9C9 394 aa13.97□□□□□ -0.17
C9orf3-202ENST00000297979 RAET1GQ6H3X3 334 aa13.97□□□□□ -0.17
C9orf3-202ENST00000297979 METTL2BQ6P1Q9 378 aaKnown RBP13.97□□□□□ -0.17
C9orf3-202ENST00000297979 OR52B6Q8NGF0 335 aa13.97□□□□□ -0.17
C9orf3-202ENST00000297979 TACO1Q9BSH4 297 aaKnown RBP13.97□□□□□ -0.17
C9orf3-202ENST00000297979 SLC12A9Q9BXP2 914 aa13.97□□□□□ -0.17
C9orf3-202ENST00000297979 AKTIPQ9H8T0 292 aa13.97□□□□□ -0.17
C9orf3-202ENST00000297979 CNOT6Q9ULM6 557 aaKnown RBP13.97□□□□□ -0.17
C9orf3-202ENST00000297979 PDE10AQ9Y233 779 aa13.97□□□□□ -0.17
C9orf3-202ENST00000297979 CKAP5Q14008 2032 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 196.1 ms