RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 RHOJQ9H4E5 214 aa15.92■□□□□ 0.14
SSRP1-202ENST00000293880 NRCAMQ92823 1304 aa15.92■□□□□ 0.14
SSRP1-202ENST00000293880 CXCR6O00574 342 aa15.92■□□□□ 0.14
SSRP1-202ENST00000293880 PAPSS2O95340 614 aaPredicted RBP15.92■□□□□ 0.14
SSRP1-202ENST00000293880 FGF1P05230 155 aa15.92■□□□□ 0.14
SSRP1-202ENST00000293880 SPATA31C1P0DKV0 1188 aa15.92■□□□□ 0.14
SSRP1-202ENST00000293880 AHCYP23526 432 aa15.92■□□□□ 0.14
SSRP1-202ENST00000293880 CORO1AP31146 461 aaKnown RBP15.92■□□□□ 0.14
SSRP1-202ENST00000293880 AFF1P51825 1210 aaKnown RBP15.92■□□□□ 0.14
SSRP1-202ENST00000293880 CLEC12AQ5QGZ9 265 aa15.92■□□□□ 0.14
SSRP1-202ENST00000293880 GPR153Q6NV75 609 aa15.92■□□□□ 0.14
SSRP1-202ENST00000293880 SAGE2PA6NJ88 616 aa15.92■□□□□ 0.14
SSRP1-202ENST00000293880 PSMA1P25786 263 aaKnown RBP15.92■□□□□ 0.14
SSRP1-202ENST00000293880 AVPR1BP47901 424 aa15.92■□□□□ 0.14
SSRP1-202ENST00000293880 DCDC1P59894 354 aa15.92■□□□□ 0.14
SSRP1-202ENST00000293880 GBE1Q04446 702 aa15.92■□□□□ 0.14
SSRP1-202ENST00000293880 OR8D1Q8WZ84 308 aa15.92■□□□□ 0.14
SSRP1-202ENST00000293880 ZNF225Q9UK10 706 aa15.92■□□□□ 0.14
SSRP1-202ENST00000293880 ANXA2P2A6NMY6 339 aa15.92■□□□□ 0.14
SSRP1-202ENST00000293880 ANXA2P07355 339 aaKnown RBP15.92■□□□□ 0.14
SSRP1-202ENST00000293880 GDF10P55107 478 aa15.92■□□□□ 0.14
SSRP1-202ENST00000293880 PTGES3Q15185 160 aaKnown RBP15.92■□□□□ 0.14
SSRP1-202ENST00000293880 PABPC1LQ4VXU2 614 aaKnown RBP15.92■□□□□ 0.14
SSRP1-202ENST00000293880 AADACL4Q5VUY2 407 aa15.92■□□□□ 0.14
SSRP1-202ENST00000293880 PDE12Q6L8Q7 609 aaKnown RBP15.92■□□□□ 0.14
SSRP1-202ENST00000293880 TEX19Q8NA77 164 aa15.92■□□□□ 0.14
SSRP1-202ENST00000293880 MFSD3Q96ES6 412 aa15.92■□□□□ 0.14
SSRP1-202ENST00000293880 HTATIP2Q9BUP3 242 aa15.92■□□□□ 0.14
SSRP1-202ENST00000293880 B3GNT4Q9C0J1 378 aa15.92■□□□□ 0.14
SSRP1-202ENST00000293880 RIMKLBQ9ULI2 386 aa15.92■□□□□ 0.14
SSRP1-202ENST00000293880 SALL3Q9BXA9 1300 aa15.92■□□□□ 0.14
SSRP1-202ENST00000293880 KIR3DL1P43629 444 aa15.92■□□□□ 0.14
SSRP1-202ENST00000293880 PRSS58Q8IYP2 241 aa15.92■□□□□ 0.14
SSRP1-202ENST00000293880 CLP1Q92989 425 aaKnown RBP15.92■□□□□ 0.14
SSRP1-202ENST00000293880 CXorf21Q9HAI6 301 aa15.92■□□□□ 0.14
SSRP1-202ENST00000293880 COQ3Q9NZJ6 369 aa15.92■□□□□ 0.14
SSRP1-202ENST00000293880 PDE10AQ9Y233 779 aa15.92■□□□□ 0.14
SSRP1-202ENST00000293880 SLC27A6Q9Y2P4 619 aa15.92■□□□□ 0.14
SSRP1-202ENST00000293880 ZNF99A8MXY4 864 aaPredicted RBP15.91■□□□□ 0.14
SSRP1-202ENST00000293880 PRMT3O60678 531 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 UGT2B4P06133 528 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 DDX6P26196 483 aaKnown RBP eCLIP15.91■□□□□ 0.145e-12■■□□□ 11.6
SSRP1-202ENST00000293880 RPP38P78345 283 aaKnown RBP15.91■□□□□ 0.14
SSRP1-202ENST00000293880 VLDLRP98155 873 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 USP41Q3LFD5 358 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 KLHDC10Q6PID8 442 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 IQCHQ86VS3 1027 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 SMPDL3BQ92485 455 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 SMG7Q92540 1137 aaKnown RBP15.91■□□□□ 0.14
SSRP1-202ENST00000293880 TMEM203Q969S6 136 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 EFCAB9A8MZ26 197 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 ZNF208O43345 1280 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 NME6O75414 186 aaPredicted RBP15.91■□□□□ 0.14
SSRP1-202ENST00000293880 PRKD3O94806 890 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 MT-CYBP00156 380 aaPredicted RBP15.91■□□□□ 0.14
SSRP1-202ENST00000293880 TUBA3CQ13748 450 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 ARSHQ5FYA8 562 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 SPAG16Q8N0X2 631 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 AKAP1Q92667 903 aaKnown RBP eCLIP15.91■□□□□ 0.14
SSRP1-202ENST00000293880 MGME1Q9BQP7 344 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 TMED9Q9BVK6 235 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 LRRC72A6NJI9 287 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 ATG13O75143 517 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 CYP2C18P33260 490 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 PTPN9P43378 593 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 SLC9A3P48764 834 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 TUBA4AP68366 448 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 LARS2Q15031 903 aaKnown RBP15.91■□□□□ 0.14
SSRP1-202ENST00000293880 PON2Q15165 354 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 SLC8B1Q6J4K2 584 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 KIAA1161Q6NSJ0 714 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 MOB2Q70IA6 237 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 PHYKPLQ8IUZ5 450 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 AIF1LQ9BQI0 150 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 ARPC4-TTLL3A0A0A6YYG9 625 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 CABYRO75952 493 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 PRKCGP05129 697 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 RPLP0P05388 317 aaKnown RBP15.91■□□□□ 0.14
SSRP1-202ENST00000293880 FSHRP23945 695 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 HTR1BP28222 390 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 ECHS1P30084 290 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 RGS8P57771 180 aaPredicted RBP15.91■□□□□ 0.14
SSRP1-202ENST00000293880 USP43Q70EL4 1123 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 UFD1Q92890 307 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 NR2E1Q9Y466 385 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 PLK4O00444 970 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 PRKCHP24723 683 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 MAPK12P53778 367 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 SCN1BQ07699 218 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 TREML2Q5T2D2 321 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 RAB12Q6IQ22 244 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 CATSPERGQ6ZRH7 1159 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 PIGXQ8TBF5 258 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 CRELD1Q96HD1 420 aa15.91■□□□□ 0.14
SSRP1-202ENST00000293880 OXCT2Q9BYC2 517 aaPredicted RBP15.91■□□□□ 0.14
SSRP1-202ENST00000293880 MAP2P11137 1827 aaKnown RBP15.9■□□□□ 0.14
SSRP1-202ENST00000293880 PTPRJQ12913 1337 aa15.9■□□□□ 0.14
SSRP1-202ENST00000293880 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.9■□□□□ 0.14
SSRP1-202ENST00000293880 PEX10O60683 326 aa15.9■□□□□ 0.14
SSRP1-202ENST00000293880 TSPAN5P62079 268 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms