RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 GPR78Q96P69 363 aa9.15□□□□□ -0.94
SSR3-201ENST00000265044 FAM83CQ9BQN1 747 aa9.15□□□□□ -0.94
SSR3-201ENST00000265044 CCM2Q9BSQ5 444 aa9.15□□□□□ -0.94
SSR3-201ENST00000265044 PIF1Q9H611 641 aa9.15□□□□□ -0.94
SSR3-201ENST00000265044 SLC22A14Q9Y267 594 aa9.15□□□□□ -0.94
SSR3-201ENST00000265044 SLC27A6Q9Y2P4 619 aa9.15□□□□□ -0.94
SSR3-201ENST00000265044 NDUFAF1Q9Y375 327 aa9.15□□□□□ -0.94
SSR3-201ENST00000265044 PTGDR2Q9Y5Y4 395 aa9.15□□□□□ -0.94
SSR3-201ENST00000265044 KCNE2Q9Y6J6 123 aa9.15□□□□□ -0.94
SSR3-201ENST00000265044 TRBV23OR9-2A0A075B6M9 112 aa9.15□□□□□ -0.95
SSR3-201ENST00000265044 K7EPI3 171 aa9.15□□□□□ -0.95
SSR3-201ENST00000265044 CTSLP07711 333 aa9.15□□□□□ -0.95
SSR3-201ENST00000265044 UROSP10746 265 aa9.15□□□□□ -0.95
SSR3-201ENST00000265044 NFYCQ13952 458 aa9.15□□□□□ -0.95
SSR3-201ENST00000265044 KPNB1Q14974 876 aaKnown RBP9.15□□□□□ -0.95
SSR3-201ENST00000265044 PHKG1Q16816 387 aa9.15□□□□□ -0.95
SSR3-201ENST00000265044 PPP1R3AQ16821 1122 aa9.15□□□□□ -0.95
SSR3-201ENST00000265044 AMZ2Q86W34 360 aa9.15□□□□□ -0.95
SSR3-201ENST00000265044 HEATR4Q86WZ0 1026 aa9.15□□□□□ -0.95
SSR3-201ENST00000265044 SFTPA1Q8IWL2 248 aa9.15□□□□□ -0.95
SSR3-201ENST00000265044 RP9Q8TA86 221 aaKnown RBP9.15□□□□□ -0.95
SSR3-201ENST00000265044 LKAAEAR1Q8TD35 194 aa9.15□□□□□ -0.95
SSR3-201ENST00000265044 ARRDC3Q96B67 414 aa9.15□□□□□ -0.95
SSR3-201ENST00000265044 CCDC28BQ9BUN5 200 aa9.15□□□□□ -0.95
SSR3-201ENST00000265044 SLC25A23Q9BV35 468 aa9.15□□□□□ -0.95
SSR3-201ENST00000265044 PLA2G2FQ9BZM2 168 aa9.15□□□□□ -0.95
SSR3-201ENST00000265044 WDR26Q9H7D7 661 aa9.15□□□□□ -0.95
SSR3-201ENST00000265044 HPS4Q9NQG7 708 aa9.15□□□□□ -0.95
SSR3-201ENST00000265044 GID8Q9NWU2 228 aa9.15□□□□□ -0.95
SSR3-201ENST00000265044 ZNF490Q9ULM2 529 aaPredicted RBP9.15□□□□□ -0.95
SSR3-201ENST00000265044 GNG14A0A1W2PPG7 69 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 CHUKO15111 745 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 VPS4BO75351 444 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 LMNAP02545 664 aaKnown RBP9.14□□□□□ -0.95
SSR3-201ENST00000265044 SNRPB2P08579 225 aaKnown RBP9.14□□□□□ -0.95
SSR3-201ENST00000265044 CCR7P32248 378 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 METAP1P53582 386 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 NAA20P61599 178 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 AP2B1P63010 937 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 FLOT2Q14254 428 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 SQLEQ14534 574 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 UBXN2BQ14CS0 331 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 AP5B1Q2VPB7 878 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 PTCHD3Q3KNS1 767 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 TRIM48Q8IWZ4 208 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 KDM1BQ8NB78 822 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 OR52B6Q8NGF0 335 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 MAGEC3Q8TD91 643 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 ATOH8Q96SQ7 321 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 DPY30Q9C005 99 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 AKTIPQ9H8T0 292 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 PRSS16Q9NQE7 514 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 DNAJC11Q9NVH1 559 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 OBP2AQ9NY56 170 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 STOML1Q9UBI4 398 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.14□□□□□ -0.95
SSR3-201ENST00000265044 PRDM4Q9UKN5 801 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 GSTA4O15217 222 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 ATP6V1G2O95670 118 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 ACP5P13686 325 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 CTSCP53634 463 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 CHIT1Q13231 466 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 RCN1Q15293 331 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 DNAJC14Q6Y2X3 702 aaPredicted RBP9.14□□□□□ -0.95
SSR3-201ENST00000265044 MACC1Q6ZN28 852 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 DPPA4Q7L190 304 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 OR4F6Q8NGB9 312 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 CADM1Q9BY67 442 aaKnown RBP9.14□□□□□ -0.95
SSR3-201ENST00000265044 WDR41Q9HAD4 459 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 NOP53Q9NZM5 478 aaKnown RBP9.14□□□□□ -0.95
SSR3-201ENST00000265044 SNX6Q9UNH7 406 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 DOLKQ9UPQ8 538 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 ZNF821O75541 412 aaPredicted RBP9.14□□□□□ -0.95
SSR3-201ENST00000265044 CLDN9O95484 217 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 JUNP05412 331 aaKnown RBP9.14□□□□□ -0.95
SSR3-201ENST00000265044 HTR1BP28222 390 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 GRAMD1BQ3KR37 738 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 PAOXQ6QHF9 649 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 GOLGA7Q7Z5G4 137 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 FAM13CQ8NE31 585 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 GFM2Q969S9 779 aaKnown RBP9.14□□□□□ -0.95
SSR3-201ENST00000265044 RAB7BQ96AH8 199 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 ZNF514Q96K75 400 aaPredicted RBP9.14□□□□□ -0.95
SSR3-201ENST00000265044 GSTO2Q9H4Y5 243 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 OR1A2Q9Y585 309 aa9.14□□□□□ -0.95
SSR3-201ENST00000265044 TANC1Q9C0D5 1861 aa9.13□□□□□ -0.95
SSR3-201ENST00000265044 RANBP2P49792 3224 aaKnown RBP9.13□□□□□ -0.95
SSR3-201ENST00000265044 CCDC154A6NI56 674 aa9.13□□□□□ -0.95
SSR3-201ENST00000265044 STX16-NPEPL1H3BU86 382 aa9.13□□□□□ -0.95
SSR3-201ENST00000265044 STX16O14662 325 aa9.13□□□□□ -0.95
SSR3-201ENST00000265044 RPN2P04844 631 aa9.13□□□□□ -0.95
SSR3-201ENST00000265044 CISD3P0C7P0 127 aa9.13□□□□□ -0.95
SSR3-201ENST00000265044 RPS3P23396 243 aaKnown RBP eCLIP9.13□□□□□ -0.956e-11■■□□□ 14.2
SSR3-201ENST00000265044 BDKRB1P46663 353 aa9.13□□□□□ -0.95
SSR3-201ENST00000265044 HMGCS1Q01581 520 aa9.13□□□□□ -0.95
SSR3-201ENST00000265044 PLCL1Q15111 1095 aa9.13□□□□□ -0.95
SSR3-201ENST00000265044 C9orf64Q5T6V5 341 aa9.13□□□□□ -0.95
SSR3-201ENST00000265044 ANO7Q6IWH7 933 aa9.13□□□□□ -0.95
SSR3-201ENST00000265044 TMPRSS11BQ86T26 416 aa9.13□□□□□ -0.95
SSR3-201ENST00000265044 TMIEQ8NEW7 156 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms