RNA–Protein interactions for RNA: ENST00000237247.10

SGIP1-201, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SGIP1, Length 3,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-201ENST00000237247 BPIFB3P59826 476 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 HERVK_113P63132 956 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 CCNA1P78396 465 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 BNC1Q01954 994 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 TRAF2Q12933 501 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 DNASE1L3Q13609 305 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 KIAA0319Q5VV43 1072 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 CLEC20AQ6ZU45 233 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 RAB44Q7Z6P3 723 aaPredicted RBP6.21□□□□□ -1.42
SGIP1-201ENST00000237247 RETREG3Q86VR2 466 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 TSPYL5Q86VY4 417 aaPredicted RBP6.21□□□□□ -1.42
SGIP1-201ENST00000237247 RIMKLAQ8IXN7 391 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 DCP1BQ8IZD4 617 aaKnown RBP6.21□□□□□ -1.42
SGIP1-201ENST00000237247 TAGAPQ8N103 731 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 EID3Q8N140 333 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 FAM156AQ8NDB6 213 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 LRRC20Q8TCA0 184 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 GRIN3AQ8TCU5 1115 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 GTF3C2Q8WUA4 911 aaPredicted RBP6.21□□□□□ -1.42
SGIP1-201ENST00000237247 HDAC2Q92769 488 aaKnown RBP6.21□□□□□ -1.42
SGIP1-201ENST00000237247 TMEM125Q96AQ2 219 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 ATXN7L3BQ96GX2 97 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 CCDC115Q96NT0 180 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 GAL3ST1Q99999 423 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 ERVK-6Q9BXR3 956 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 BRINP2Q9C0B6 783 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 SEMA6AQ9H2E6 1030 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 MFSD1Q9H3U5 465 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 CDHR5Q9HBB8 845 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 PIH1D1Q9NWS0 290 aaKnown RBP6.21□□□□□ -1.42
SGIP1-201ENST00000237247 CPNE7Q9UBL6 633 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 CCDC78A2IDD5 438 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 TMEM233B4DJY2 109 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 ARPC2O15144 300 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 GREM1O60565 184 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 ABCB7O75027 752 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 CCNKO75909 580 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 ALDOCP09972 364 aaKnown RBP6.21□□□□□ -1.42
SGIP1-201ENST00000237247 SLC6A2P23975 617 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 HTR2BP41595 481 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 RPS9P46781 194 aaKnown RBP6.21□□□□□ -1.42
SGIP1-201ENST00000237247 HOXA1P49639 335 aaPredicted RBP6.21□□□□□ -1.42
SGIP1-201ENST00000237247 ST13P50502 369 aaKnown RBP6.21□□□□□ -1.42
SGIP1-201ENST00000237247 SLC12A2P55011 1212 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 MGAT3Q09327 533 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 TRIM32Q13049 653 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 RCAN2Q14206 197 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 FSCN1Q16658 493 aaKnown RBP6.21□□□□□ -1.42
SGIP1-201ENST00000237247 PERM1Q5SV97 790 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 GPR107Q5VW38 600 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 RSBN1Q5VWQ0 802 aaPredicted RBP6.21□□□□□ -1.42
SGIP1-201ENST00000237247 ZNF544Q6NX49 715 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 XKRXQ6PP77 449 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 BLOC1S3Q6QNY0 202 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 ARSKQ6UWY0 536 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 RNF165Q6ZSG1 346 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 CMTR2Q8IYT2 770 aaKnown RBP6.21□□□□□ -1.42
SGIP1-201ENST00000237247 TMEM86AQ8N2M4 240 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 ZNF786Q8N393 782 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 CPA6Q8N4T0 437 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 DPP10Q8N608 796 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 RNF148Q8N7C7 305 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 ZNF565Q8N9K5 539 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 KLHL6Q8WZ60 621 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 ZNF566Q969W8 418 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 ELMO2Q96JJ3 720 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 MARK4Q96L34 752 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.21□□□□□ -1.42
SGIP1-201ENST00000237247 ANKHQ9HCJ1 492 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 CMTM6Q9NX76 183 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 BAG5Q9UL15 447 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 GMPPBQ9Y5P6 360 aa6.21□□□□□ -1.42
SGIP1-201ENST00000237247 TDRD15B5MCY1 1934 aaKnown RBP6.21□□□□□ -1.42
SGIP1-201ENST00000237247 SCN8AQ9UQD0 1980 aa6.2□□□□□ -1.42
SGIP1-201ENST00000237247 A0A0J9YYE9 177 aa6.2□□□□□ -1.42
SGIP1-201ENST00000237247 RRN3P2A6NIE6 340 aa6.2□□□□□ -1.42
SGIP1-201ENST00000237247 FAM72CH0Y354 149 aa6.2□□□□□ -1.42
SGIP1-201ENST00000237247 H3BMM5 538 aa6.2□□□□□ -1.42
SGIP1-201ENST00000237247 KATNA1O75449 491 aa6.2□□□□□ -1.42
SGIP1-201ENST00000237247 WDPCPO95876 746 aa6.2□□□□□ -1.42
SGIP1-201ENST00000237247 PDGFAP04085 211 aa6.2□□□□□ -1.42
SGIP1-201ENST00000237247 FDXRP22570 491 aa6.2□□□□□ -1.42
SGIP1-201ENST00000237247 ALDH7A1P49419 539 aaKnown RBP6.2□□□□□ -1.42
SGIP1-201ENST00000237247 NUBP1P53384 320 aa6.2□□□□□ -1.42
SGIP1-201ENST00000237247 ZNF181Q2M3W8 571 aa6.2□□□□□ -1.42
SGIP1-201ENST00000237247 UNC50Q53HI1 259 aa6.2□□□□□ -1.42
SGIP1-201ENST00000237247 FAM72AQ5TYM5 149 aa6.2□□□□□ -1.42
SGIP1-201ENST00000237247 BROXQ5VW32 411 aa6.2□□□□□ -1.42
SGIP1-201ENST00000237247 FAM72DQ6L9T8 149 aa6.2□□□□□ -1.42
SGIP1-201ENST00000237247 KDELC1Q6UW63 502 aa6.2□□□□□ -1.42
SGIP1-201ENST00000237247 ARHGAP36Q6ZRI8 547 aa6.2□□□□□ -1.42
SGIP1-201ENST00000237247 FAM72BQ86X60 149 aa6.2□□□□□ -1.42
SGIP1-201ENST00000237247 GATAD2AQ86YP4 633 aa6.2□□□□□ -1.42
SGIP1-201ENST00000237247 ARHGAP12Q8IWW6 846 aa6.2□□□□□ -1.42
SGIP1-201ENST00000237247 WDR48Q8TAF3 677 aa6.2□□□□□ -1.42
SGIP1-201ENST00000237247 AGR3Q8TD06 166 aa6.2□□□□□ -1.42
SGIP1-201ENST00000237247 FBLIM1Q8WUP2 373 aa6.2□□□□□ -1.42
SGIP1-201ENST00000237247 ISG20Q96AZ6 181 aaKnown RBP6.2□□□□□ -1.42
SGIP1-201ENST00000237247 MNTQ99583 582 aa6.2□□□□□ -1.42
SGIP1-201ENST00000237247 FEM1AQ9BSK4 669 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms