RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Zmat1Q3V0C1 714 aa15.33■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 TCAIMQ66JZ4 499 aa15.33■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Gspt1Q8R050 636 aaKnown RBP15.33■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Olfr606Q8VGZ8 319 aa15.33■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Cyp4f3Q99N16 524 aa15.33■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 TpbpbQ9CQC0 121 aa15.33■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Atg7Q9D906 698 aa15.33■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 D7h11orf16Q9JJR6 402 aa15.33■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 PappaQ8R4K8 1624 aa15.33■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Olfr1480A0A140LIR8 359 aa15.33■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Olfr521E9Q519 321 aa15.33■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Tpst2O88856 376 aa15.33■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 RapsnP12672 412 aa15.33■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Aff3P51827 1254 aa15.33■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 TgfbiP82198 683 aa15.33■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Mapk10Q61831 464 aa15.33■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Asf1aQ9CQE6 204 aa15.33■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 CenpnQ9CZW2 337 aa15.33■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Prss23Q9D6X6 382 aa15.33■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Plin3Q9DBG5 437 aa15.33■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Akr1e2Q9DCT1 301 aa15.33■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Insl5Q9WUG6 135 aa15.33■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Gm7792A0A0J9YU01 481 aa15.33■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Itih4A6X935 942 aa15.33■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Gm3183D3YUJ6 481 aa15.33■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Gm3139J3QK78 481 aa15.33■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Gm3106J3QPH3 481 aa15.33■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Gm6337K7N6X9 211 aa15.33■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Gm3115L7N285 211 aa15.33■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Lad1P57016 528 aa15.33■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Pag1Q3U1F9 429 aa15.33■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Itga1Q3V3R4 1179 aa15.33■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Gpc2Q8BKV1 579 aa15.33■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Fam180aQ8BR21 173 aa15.33■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 PpidQ9CR16 370 aaKnown RBP15.33■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 PpigA2AR02 752 aaKnown RBP15.33■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Vmn1r76F8VQ63 324 aa15.33■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 CtscP97821 462 aa15.33■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Bcl2a1Q07440 172 aa15.33■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 CilpQ66K08 1184 aa15.33■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Cnksr3Q8BMA3 555 aa15.33■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Ptpn7Q8BUM3 359 aa15.33■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Sit1Q8C503 180 aa15.33■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Pabpc5Q8C7D3 381 aaKnown RBP15.33■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Traf3ip2Q8N7N6 555 aa15.33■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Gpr45Q9EQQ4 373 aa15.33■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Gm21488A0A087WR99 222 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Tmem236A2ARJ3 344 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Trmt1lA2RSY6 728 aaKnown RBP15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Prrt4B2RU40 902 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Mybpc1D3YU50 1127 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Aldh1a7O35945 501 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 E2f2P56931 443 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Cdc42P60766 191 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Jak3Q62137 1100 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Trit1Q80UN9 467 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Arhgef38Q80VK6 770 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 SowahcQ8C0J6 512 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Tbc1d14Q8CGA2 694 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Atp6v1c2Q99L60 427 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 KelQ9EQF2 713 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Mid2Q9QUS6 705 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Fads2Q9Z0R9 444 aaKnown RBP15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Creb3l1Q9Z125 519 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Gm45713A0A1B0GS68 446 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Slc2a2P14246 523 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Cpa3P15089 417 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Epb42P49222 691 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Rabl6Q5U3K5 725 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Rbl1Q64701 1063 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Klhl42Q8BFQ9 493 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 GnsQ8BFR4 544 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Ppp1r15bQ8BFW3 697 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Arhgap22Q8BL80 702 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Acat2Q8CAY6 397 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Gstm4Q8R5I6 218 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Tmem161aQ8VCA6 480 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Cxxc5Q91WA4 317 aaKnown RBP15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 SardhQ99LB7 919 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Rprd1bQ9CSU0 326 aaKnown RBP15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Tmbim6Q9D2C7 237 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Akain1G3UWD5 69 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Gm29394H3BIW7 199 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Rhox2gL7MUB9 191 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Angpt1O08538 498 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 FesP16879 822 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Alox12P39655 663 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Ube2e3P52483 207 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Tgm3Q08189 693 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Dalrd3Q6PJN8 538 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Olfr293Q7TS10 336 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Zfp595Q8BIN6 625 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Ankrd54Q91WK7 299 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Ltbp2O08999 1813 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Cbx4O55187 551 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Mkl2P59759 1080 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Kir3dl1P83555 432 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Trappc9Q3U0M1 1148 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Olfr325Q5NCD2 326 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Zfp606Q7TSV0 794 aa15.32■□□□□ 0.04
Retrieved 100 of 22,080 RNA–protein pairs in 37 ms