RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Gpld1O70362 837 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Ass1P16460 412 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 FasP25446 327 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Ighmbp2P40694 993 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 AcadlP51174 430 aaKnown RBP8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Btbd3P58545 530 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Col6a2Q02788 1034 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gm853Q3UNZ2 425 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gcnt3Q5JCT0 437 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Caprin1Q60865 707 aaKnown RBP8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Mapk6Q61532 720 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Sorbs1Q62417 1290 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Olfr412Q7TRW7 312 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Olfr374Q7TRY0 313 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Mcph1Q7TT79 822 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 McubQ810S1 345 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Ces2eQ8BK48 559 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Rtn4rl1Q8K0S5 445 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Vmn1r206Q8R277 312 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Upb1Q8VC97 393 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Tmem45bQ8VCZ2 278 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Pcdhb11Q91UZ8 797 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Olfr114Q923Q8 312 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Mgme1Q9CXC3 338 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Mrps22Q9CXW2 359 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Efhd1Q9D4J1 240 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Vps35Q9EQH3 796 aaKnown RBP8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Yipf5Q9EQQ2 257 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 AmfrQ9R049 643 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Galk1Q9R0N0 392 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Mapk13Q9Z1B7 366 aa8.94□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Mybbp1aQ7TPV4 1344 aaKnown RBP8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Trbc2A0A075B5J4 173 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Btbd35f21A0A140T8Q5 498 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gm14781A2A9Q9 366 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Spaca5A2AE20 160 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Dpy19l4A2AJQ3 722 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gm5936A2BG95 728 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gm5640A3KG49 728 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Olfr247E9PVJ7 320 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Vmn2r120E9PX34 856 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Olfr819K7N727 320 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Sult3a1O35403 293 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 UgdhO70475 493 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 P01851 173 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Cdh4P39038 913 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Npbwr1P49681 329 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Sult1e1P49891 295 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Pex2P55098 305 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Tubgcp3P58854 905 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Pcsk1P63239 753 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 SirpaP97797 513 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 RelaQ04207 549 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Cd36Q08857 472 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Dok7Q18PE0 504 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Srebf2Q3U1N2 1130 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Adad1Q5SUE7 619 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 FaddQ61160 205 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 TCAIMQ66JZ4 499 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Pwwp2aQ69Z61 730 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 HpseQ6YGZ1 535 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Spcs3Q6ZWQ7 180 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Wfikkn2Q7TQN3 571 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Adamtsl2Q7TSK7 957 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Pgr15lQ80T54 456 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Znf569Q80W31 679 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Actbl2Q8BFZ3 376 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Me3Q8BMF3 604 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Spem2Q8C5U4 503 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 YbeyQ8CAV0 164 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Acsm2Q8K0L3 575 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Stx5Q8K1E0 355 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Colgalt1Q8K297 617 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Vwa1Q8R2Z5 415 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Cdpf1Q8R3A2 119 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Commd8Q9CZG3 183 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Yae1d1Q9DAY6 216 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Fam122aQ9DB52 284 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Il1rapl2Q9ERS6 686 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Wnt16Q9QYS1 364 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Plod3Q9R0E1 741 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Mmp16Q9WTR0 607 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 FarsbQ9WUA2 589 aaKnown RBP8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gm21117A0A087WPJ9 222 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gm20820A0A087WPP3 222 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gm20937A0A087WQA3 222 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gm21258A0A087WQC7 222 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gm28102A0A087WQL3 222 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gm21095A0A087WR14 222 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gm21488A0A087WR99 222 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gm21497A0A087WRK3 222 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gm28576A0A087WRP6 222 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gm21294A0A087WS79 222 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gm20824A0A087WS97 222 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gm20911A0A087WSS0 222 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gm28870A0A0A6YW38 222 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Zfp612A0A1D5RMC2 672 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 C87977A2A958 498 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Prr32A2AFE9 284 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gm4969D3YZT1 566 aa8.93□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 100.1 ms