RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Btbd35f16A0A087WSN2 498 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Smim17A0A504 109 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Smok4aA0JLX3 433 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Lzts3A2AHG0 700 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Sec14l5B2RXM5 696 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Vsig10lD3YZF7 868 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Vmn2r50E9PW61 861 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Gm5152L7N200 190 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Cbx3P23198 183 aaKnown RBP9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Gria2P23819 883 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 LvrnQ2KHK3 559 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Rasgrp3Q6NZH9 691 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Q6PAC4 1279 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Klhl5Q6PFE1 708 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Rbm11Q80YT9 238 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Sephs1Q8BH69 392 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 4931406P16RikQ8C5X1 1059 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Ifnl3Q8CGK6 193 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Armcx6Q8K3A6 301 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Olfr847Q8VFF4 312 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Cd209eQ91ZW7 208 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Rnf144aQ925F3 292 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Lrrc18Q9CQ07 262 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Cyp4v2Q9DBW0 525 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Olfr625-ps1A0A140T8L4 321 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Sppl2cA2A6C4 690 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Trim15G3UY57 292 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 PthlhP22858 175 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Kcnj2P35561 428 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 TfamP40630 243 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Kcnab3P97382 249 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Uba1Q02053 1058 aaKnown RBP9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 MitfQ08874 526 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Inf2Q0GNC1 1273 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Olfr616Q3KPB0 317 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 GstcdQ5RL51 634 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Stard3Q61542 446 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Tead4Q62296 427 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Pou4f2Q63934 411 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Syt14Q7TN84 555 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Plekha6Q7TQG1 1173 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Insig1Q8BGI3 259 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Slc25a24Q8BMD8 475 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Serpinb9dQ8BMT0 377 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Hs3st5Q8BSL4 346 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Phf11aQ8BVM9 293 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Rdh12Q8BYK4 316 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Nckap1lQ8K1X4 1134 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Tmem203Q8R235 136 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Olfr617Q8VGA1 318 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Klk6Q91Y82 253 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Trim33Q99PP7 1142 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Tmem135Q9CYV5 458 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Ola1Q9CZ30 396 aaKnown RBP9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Smg9Q9DB90 520 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Epm2aQ9WUA5 330 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Padi4Q9Z183 666 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Olfr1200A2ATJ4 336 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Otud3B1AZ99 396 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Slc28a1E9PXX9 648 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Gm3636E9Q5P1 227 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Vmn2r21K7N6Y7 853 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Vmn2r20L7N2B1 853 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 KlO35082 1014 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Vti1bO88384 232 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 P01652 108 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Sept4P28661 478 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Rab23P35288 237 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 StacP97306 403 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Fam171bQ14CH0 825 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 H2-M3Q31093 336 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Fam169aQ5XG69 665 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Gpr17Q6NS65 339 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Chst2Q80WV3 530 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Ccdc116Q80X53 541 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Hsfy2Q80Y37 392 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Acad9Q8JZN5 625 aaKnown RBP9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Ugt2b34Q8K154 532 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Timd2Q8R183 305 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Hid1Q8R1F6 788 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Ccdc92Q8VDN4 314 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Nprl3Q8VIJ8 569 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Hspa12bQ9CZJ2 685 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Tmed11Q9D2R4 215 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Mrpl17Q9D8P4 176 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Rpn2Q9DBG6 631 aaKnown RBP9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Vnn3Q9QZ25 500 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 B9d1Q9R1S0 204 aa9.59□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 1810010D01RikA0A1L1SR87 51 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Cilp2D3Z7H8 1162 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Gm20503G3UZK1 150 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Coro1aO89053 461 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Enpp1P06802 906 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Cdh2P15116 906 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 HmbsP22907 361 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Stfa3P35173 103 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Gpx3P46412 226 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Pdcd5P56812 126 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Cd163Q2VLH6 1121 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Fpr-rs6Q3SXG2 339 aa9.58□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 51.6 ms