RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Bpifb5Q3UQ05 490 aa6.8□□□□□ -1.32
Bdnf-201ENSMUST00000053317 TceancQ3US16 359 aa6.8□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Fam189bQ5HZJ5 669 aa6.8□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Pon2Q62086 354 aa6.8□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Rsbn1Q80T69 795 aa6.8□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Mfn1Q811U4 741 aa6.8□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Pabpc5Q8C7D3 381 aaKnown RBP6.8□□□□□ -1.32
Bdnf-201ENSMUST00000053317 EdaraddQ8VHX2 208 aa6.8□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Imp4Q8VHZ7 291 aaKnown RBP6.8□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Camk1gQ91VB2 477 aa6.8□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Mtif2Q91YJ5 727 aaKnown RBP6.8□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Plpp3Q99JY8 312 aa6.8□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Ubxn6Q99PL6 442 aa6.8□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Asf1aQ9CQE6 204 aa6.8□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Slc25a13Q9QXX4 676 aa6.8□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Coro1cQ9WUM4 474 aa6.8□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Grin3aA2AIR5 1135 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Sema3aO08665 772 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Hs3st1O35310 311 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Grk6O70293 576 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Il27raO70394 623 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Cdh16O88338 830 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Mtnd3P03899 115 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Ap2a1P17426 977 aaKnown RBP6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Cyr61P18406 379 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 CryaaP24622 196 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 RxraP28700 467 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 CrtamQ149L7 389 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Slfn4Q3UV66 602 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Fut10Q5F2L2 481 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 RalyQ64012 312 aaKnown RBP6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 VclQ64727 1066 aaKnown RBP6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Rexo4Q6PAQ4 432 aaKnown RBP6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Prpf38bQ80SY5 542 aaKnown RBP6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Mterf2Q8BKY8 385 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Npsr1Q8BZP8 371 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Ttc34Q8C0Q3 554 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Fmo9Q8C116 539 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Adprhl2Q8CG72 370 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Spp2Q8K1I3 203 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Scara5Q8K299 491 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Sirt5Q8K2C6 310 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Swi5Q8K3D3 89 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Olfr96Q8VFE3 313 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Olfr535Q8VGL3 312 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Cldn22Q9D7U6 220 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Sh3glb1Q9JK48 365 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Hapln1Q9QUP5 356 aaKnown RBP6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Asb4Q9WV71 426 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Ap4b1Q9WV76 738 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 6030498E09RikB1AX85 169 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Gfra2O08842 464 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 ChkaO54804 453 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 S100a6P14069 89 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Kpna2P52293 529 aaKnown RBP6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 UtyP79457 1212 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Znf112Q0VAW7 879 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Ppm1hQ3UYC0 513 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Brsk1Q5RJI5 778 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Cyb5d2Q5SSH8 263 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Arcn1Q5XJY5 511 aaKnown RBP6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Olfr12Q60894 333 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Gpr65Q61038 337 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 CilpQ66K08 1184 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Far2Q7TNT2 515 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Znf569Q80W31 679 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Zmpste24Q80W54 475 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Pcid2Q8BFV2 399 aaKnown RBP6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Nars2Q8BGV0 477 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 SybuQ8BHS8 665 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Edem2Q8BJT9 577 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Catsper4Q8BVN3 442 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Dnali1Q8BVN8 258 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Frs2Q8C180 508 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Agr3Q8R3W7 165 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 TfQ921I1 697 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 CoprsQ9CQ13 173 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Lyrm1Q9CQB7 122 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Mrps17Q9CQE3 120 aaKnown RBP6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Retreg3Q9CQV4 466 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Arl2Q9D0J4 184 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Senp8Q9D2Z4 221 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Fam162aQ9D6U8 155 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 RtcAQ9D7H3 366 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 PyglQ9ET01 850 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Ak1Q9R0Y5 194 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Plxna3P70208 1872 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Slfn8B1ARD8 910 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Gm3259D3YUK0 475 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Gm8237E9Q257 205 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Spin2fJ3QPU0 254 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 C1qbpO35658 278 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Il3P01586 166 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Sbk3P0C5K0 361 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Drg1P32233 367 aaKnown RBP6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Pdx1P52946 284 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 TekQ02858 1122 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Akap14Q3V0I7 536 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Tmem45aQ60774 273 aa6.79□□□□□ -1.32
Bdnf-201ENSMUST00000053317 Jak3Q62137 1100 aa6.79□□□□□ -1.32
Retrieved 100 of 22,080 RNA–protein pairs in 22.4 ms