RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Cops4O88544 406 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Them4Q3UUI3 230 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Guk1Q64520 198 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Apbb3Q8R1C9 486 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Pcdhb8Q91XZ2 779 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 March2Q99M02 246 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Marc1Q9CW42 340 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Ptges3lQ9D9A7 131 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Chst7Q9EP78 484 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Gsk3aQ2NL51 490 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Q3KQP7 184 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Olfr1477Q7TQQ7 315 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Ttc29Q80VM3 471 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Sgpp2Q810K3 354 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Eif4bQ8BGD9 611 aaKnown RBP16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Q8CD60 292 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Gemin2Q9CQQ4 269 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 HemgnQ9ERZ0 503 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Tll2Q9WVM6 1012 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Padi4Q9Z183 666 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Zscan4eA0A1B0GRE8 505 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Gm8220F6YKI2 213 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Il18r1Q61098 537 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 DazlQ64368 298 aaKnown RBP16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Ugt2b34Q8K154 532 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Adamts13Q769J6 1426 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 ItpkbB2RXC2 942 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Gm21103E9Q2Q1 267 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Olfr738L7N1X7 311 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 H2-M3Q31093 336 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Gm732Q3V0P9 516 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Adam29Q811Q4 763 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 TbceQ8CIV8 524 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Znf639Q99KZ6 485 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 AgkQ9ESW4 421 aa16.39■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Slit3Q9WVB4 1523 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Nkx1-1G3UXB3 402 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Fbp2P70695 339 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Wscd1Q80XH4 572 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 9530002B09RikQ9EPV7 135 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Gm4756A0A140LIS8 335 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Zfp990B1AVN5 605 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 H2-M11F6U8V3 335 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Ulk1O70405 1051 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 4930550L24RikQ99PA7 320 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 D10Wsu102eQ9CX66 185 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Tnfrsf18O35714 228 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 EpycP70186 322 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Olfr183Q8VFB9 309 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Grhl1Q921D9 618 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Gtf2h2Q9JIB4 396 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Fth1P09528 182 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Bop1P97452 732 aaKnown RBP16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Xlr4cQ3TKR2 215 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Clca4bQ3UW98 925 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Zfp280bQ505F4 534 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Q810N5 247 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Olfr348Q8VGK3 313 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Sh3bp4Q921I6 962 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 SncaipQ99ME3 962 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Exoc2Q9D4H1 924 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Alg5Q9DB25 324 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Xlr4bQ9JJQ7 215 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Lbx2Q9WUN8 195 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Cd163l1A0A1B0GSB0 991 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Slc22a1O08966 556 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Fignl1Q8BPY9 683 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Pyhin1Q8BV49 420 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Dcdc2cQ9D1B8 347 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Usp17ldG5E8G2 545 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Usp17lcG5E8I7 545 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Htr4P97288 388 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Dalrd3Q6PJN8 538 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Serpina12Q7TMF5 413 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Slc25a3Q8VEM8 357 aaKnown RBP16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 As3mtQ91WU5 376 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 PlgrktQ9D3P8 147 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Amd2D3Z6H8 334 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Vmn2r59E9PUT5 865 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Ercc2O08811 760 aaKnown RBP16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Slc22a2O70577 553 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Amd1P0DMN7 334 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Abraxas2Q3TCJ1 415 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Rnf220Q6PDX6 566 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Dnajc16Q80TN4 772 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Ppp1r11Q8K1L5 131 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Arl8bQ9CQW2 186 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 TfgQ9Z1A1 397 aa16.38■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 KantrA0A1W2P7I0 76 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Fam46aD3Z5S8 447 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 GnazO70443 355 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Apoa2P09813 102 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Cyp2a5P20852 494 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Plin2P43883 425 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 GlrbP48168 496 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Serpine2Q07235 397 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Zzz3Q6KAQ7 910 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Fastkd5Q7TMV3 762 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Nudt15Q8BG93 170 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 4933402J07RikQ8BHX0 270 aa16.37■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 48.4 ms