RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 Top3aO70157 1003 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Klk1b9P15949 261 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Hoxa2P31245 372 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Slc2a3P32037 493 aaKnown RBP11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Asgr1P34927 284 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Hmx2P43687 273 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 ClgnP52194 611 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Cd59bP58019 129 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 GuloP58710 440 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Arl4cP61208 192 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Fpr-rs6Q3SXG2 339 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Uri1Q3TLD5 531 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Nt5dc3Q3UHB1 546 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Nr1d1Q3UV55 615 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Fam160a1Q505K2 1081 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 ADGRF3Q58Y75 991 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 E2f1Q61501 430 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Fgfr3Q61851 801 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Sec24dQ6NXL1 1032 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Arhgef18Q6P9R4 1021 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Tmem270Q6UJB9 264 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Spag5Q7TME2 1165 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Tubb2aQ7TMM9 445 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Tas2r38Q7TQA6 331 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Znf516Q7TSH3 1157 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Klhl29Q80T74 875 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Sass6Q80UK7 654 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 NfascQ810U3 1240 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Mblac2Q8BL86 279 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Fjx1Q8BQB4 450 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 B430218F22RikQ8BQR5 223 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Mrpl22Q8BU88 206 aaKnown RBP11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 TtpaQ8BWP5 278 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Clip4Q8CI96 704 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Syngr3Q8R191 229 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Mptx1Q8R1M8 219 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Smyd2Q8R5A0 433 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Gtf2h3Q8VD76 309 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Tti1Q91V83 1085 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Mrgpra2Q91WW4 305 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Pcdhga9Q91XX9 932 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 TardbpQ921F2 414 aaKnown RBP11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Nkx6-1Q99MA9 365 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Tubb2bQ9CWF2 445 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Bud23Q9CY21 281 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Chchd2Q9D1L0 153 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Hhipl2Q9D2G9 717 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 C1qtnf2Q9D8U4 294 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Dennd6bQ9D9V7 585 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Mfsd2aQ9DA75 534 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Ccdc97Q9DBT3 340 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 CrotQ9DC50 612 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Ndst3Q9EQH7 873 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Cyp3a44Q9EQW4 504 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Aff4Q9ESC8 1160 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Il20Q9JKV9 176 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 PrepQ9QUR6 710 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 MioxQ9QXN5 285 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 TesminQ9WTJ6 475 aa11.12□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Slfn3A0A1L1STQ7 640 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Tbc1d25A1A5B6 742 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Tox2A2A472 547 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Akap5D3YVF0 745 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Vmn2r22E9Q7S8 853 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Vmn2r45L7N2B5 852 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Capn5O08688 640 aaKnown RBP11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Dync1i1O88485 628 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 CopeO89079 308 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Trim30aP15533 496 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 MutP16332 748 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 EnpepP16406 945 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Gabrg3P27681 467 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 BtkP35991 659 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Cct8P42932 548 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Il12rb2P97378 874 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Anp32eP97822 260 aaKnown RBP11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 ptchd1Q14B62 888 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Kcnh6Q32ME0 950 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Krt26Q3TRJ4 462 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 SbplQ3TUY3 232 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Gm5460Q3UQ97 254 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Lrrc8bQ5DU41 803 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 VclQ64727 1066 aaKnown RBP11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Ephx4Q6IE26 359 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Gstm7Q80W21 218 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 GgnQ80WJ1 673 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Ppm1nQ8BGL1 404 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Trim23Q8BGX0 574 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Snx14Q8BHY8 964 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Pggt1bQ8BUY9 377 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Yipf4Q8C407 246 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 SinhcafQ8C8M1 221 aaKnown RBP11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Zfpm2Q8CCH7 1151 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Ccdc63Q8CDV6 558 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Calcoco1Q8CGU1 691 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Mettl22Q8R1C6 393 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Otud7aQ8R554 926 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Olfr114Q923Q8 312 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 BniplQ99JU7 328 aa11.11□□□□□ -0.63
Ccdc28b-201ENSMUST00000030586 Gpn3Q9D3W4 284 aa11.11□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 31.1 ms