RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 CHAF1BQ13112 559 aa9.85□□□□□ -0.83
PHGDH-222ENST00000641587 MAP7Q14244 749 aa9.85□□□□□ -0.83
PHGDH-222ENST00000641587 PRPSAP1Q14558 356 aa9.85□□□□□ -0.83
PHGDH-222ENST00000641587 PLA2G4EQ3MJ16 856 aa9.85□□□□□ -0.83
PHGDH-222ENST00000641587 CRTC2Q53ET0 693 aaPredicted RBP9.85□□□□□ -0.83
PHGDH-222ENST00000641587 TEX44Q53QW1 395 aa9.85□□□□□ -0.83
PHGDH-222ENST00000641587 CAPRIN2Q6IMN6 1127 aaKnown RBP9.85□□□□□ -0.83
PHGDH-222ENST00000641587 TCTN3Q6NUS6 607 aa9.85□□□□□ -0.83
PHGDH-222ENST00000641587 C6orf15Q6UXA7 325 aaPredicted RBP9.85□□□□□ -0.83
PHGDH-222ENST00000641587 C4orf22Q6V702 233 aa9.85□□□□□ -0.83
PHGDH-222ENST00000641587 ZNF765Q7L2R6 523 aa9.85□□□□□ -0.83
PHGDH-222ENST00000641587 SLC9B2Q86UD5 537 aa9.85□□□□□ -0.83
PHGDH-222ENST00000641587 BBOF1Q8ND07 529 aa9.85□□□□□ -0.83
PHGDH-222ENST00000641587 FATE1Q969F0 183 aa9.85□□□□□ -0.83
PHGDH-222ENST00000641587 C9orf72Q96LT7 481 aa9.85□□□□□ -0.83
PHGDH-222ENST00000641587 OR6C1Q96RD1 312 aa9.85□□□□□ -0.83
PHGDH-222ENST00000641587 GBA3Q9H227 469 aa9.85□□□□□ -0.83
PHGDH-222ENST00000641587 TRIT1Q9H3H1 467 aaKnown RBP9.85□□□□□ -0.83
PHGDH-222ENST00000641587 OSGEPL1Q9H4B0 414 aa9.85□□□□□ -0.83
PHGDH-222ENST00000641587 STN1Q9H668 368 aaKnown RBP9.85□□□□□ -0.83
PHGDH-222ENST00000641587 ANKZF1Q9H8Y5 726 aa9.85□□□□□ -0.83
PHGDH-222ENST00000641587 FAM114A2Q9NRY5 505 aa9.85□□□□□ -0.83
PHGDH-222ENST00000641587 POLHQ9Y253 713 aa9.85□□□□□ -0.83
PHGDH-222ENST00000641587 NEU2Q9Y3R4 380 aa9.85□□□□□ -0.83
PHGDH-222ENST00000641587 SLC30A1Q9Y6M5 507 aa9.85□□□□□ -0.83
PHGDH-222ENST00000641587 MED13Q9UHV7 2174 aa9.85□□□□□ -0.83
PHGDH-222ENST00000641587 UNC79Q9P2D8 2635 aa9.85□□□□□ -0.83
PHGDH-222ENST00000641587 LILRA5A6NI73 299 aa9.84□□□□□ -0.83
PHGDH-222ENST00000641587 DNALI1O14645 258 aaPredicted RBP9.84□□□□□ -0.83
PHGDH-222ENST00000641587 NDC80O14777 642 aa9.84□□□□□ -0.83
PHGDH-222ENST00000641587 KIF1CO43896 1103 aaKnown RBP9.84□□□□□ -0.83
PHGDH-222ENST00000641587 SEMA7AO75326 666 aa9.84□□□□□ -0.83
PHGDH-222ENST00000641587 RFPL1O75677 317 aa9.84□□□□□ -0.83
PHGDH-222ENST00000641587 PRLP01236 227 aa9.84□□□□□ -0.83
PHGDH-222ENST00000641587 C9P02748 559 aa9.84□□□□□ -0.83
PHGDH-222ENST00000641587 ANKRD34CP0C6C1 535 aa9.84□□□□□ -0.83
PHGDH-222ENST00000641587 ZNF30P17039 623 aa9.84□□□□□ -0.83
PHGDH-222ENST00000641587 MCM3P25205 808 aa9.84□□□□□ -0.83
PHGDH-222ENST00000641587 ITGA8P53708 1063 aa9.84□□□□□ -0.83
PHGDH-222ENST00000641587 EPHB1P54762 984 aa9.84□□□□□ -0.83
PHGDH-222ENST00000641587 RPS18P62269 152 aaKnown RBP9.84□□□□□ -0.83
PHGDH-222ENST00000641587 ESPL1Q14674 2120 aa9.84□□□□□ -0.83
PHGDH-222ENST00000641587 SEPT7Q16181 437 aaKnown RBP9.84□□□□□ -0.83
PHGDH-222ENST00000641587 NADK2Q4G0N4 442 aa9.84□□□□□ -0.83
PHGDH-222ENST00000641587 HENMT1Q5T8I9 393 aaKnown RBP9.84□□□□□ -0.83
PHGDH-222ENST00000641587 CPZQ66K79 652 aa9.84□□□□□ -0.83
PHGDH-222ENST00000641587 DUPD1Q68J44 220 aa9.84□□□□□ -0.83
PHGDH-222ENST00000641587 CRTC3Q6UUV7 619 aa9.84□□□□□ -0.83
PHGDH-222ENST00000641587 LYSMD3Q7Z3D4 306 aa9.84□□□□□ -0.83
PHGDH-222ENST00000641587 RASGRP3Q8IV61 690 aa9.84□□□□□ -0.83
PHGDH-222ENST00000641587 TEX26Q8N6G2 289 aa9.84□□□□□ -0.83
PHGDH-222ENST00000641587 LPCAT1Q8NF37 534 aa9.84□□□□□ -0.83
PHGDH-222ENST00000641587 RSC1A1Q92681 617 aa9.84□□□□□ -0.83
PHGDH-222ENST00000641587 SH3KBP1Q96B97 665 aa9.84□□□□□ -0.83
PHGDH-222ENST00000641587 STAMBPL1Q96FJ0 436 aa9.84□□□□□ -0.83
PHGDH-222ENST00000641587 TEKT5Q96M29 485 aa9.84□□□□□ -0.83
PHGDH-222ENST00000641587 PLEKHG4BQ96PX9 1271 aa9.84□□□□□ -0.83
PHGDH-222ENST00000641587 TDRD1Q9BXT4 1180 aaKnown RBP9.84□□□□□ -0.83
PHGDH-222ENST00000641587 AKIRIN1Q9H9L7 192 aaPredicted RBP9.84□□□□□ -0.83
PHGDH-222ENST00000641587 GLOD4Q9HC38 313 aa9.84□□□□□ -0.83
PHGDH-222ENST00000641587 VPS18Q9P253 973 aa9.84□□□□□ -0.83
PHGDH-222ENST00000641587 ATXN10Q9UBB4 475 aa9.84□□□□□ -0.83
PHGDH-222ENST00000641587 SLC23A2Q9UGH3 650 aa9.84□□□□□ -0.83
PHGDH-222ENST00000641587 LNPEPQ9UIQ6 1025 aa9.84□□□□□ -0.83
PHGDH-222ENST00000641587 ANAPC5Q9UJX4 755 aa9.84□□□□□ -0.83
PHGDH-222ENST00000641587 PCDHB3Q9Y5E6 796 aa9.84□□□□□ -0.83
PHGDH-222ENST00000641587 MYO9AB2RTY4 2548 aa9.84□□□□□ -0.83
PHGDH-222ENST00000641587 RP1L1Q8IWN7 2480 aaPredicted RBP9.83□□□□□ -0.84
PHGDH-222ENST00000641587 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.83□□□□□ -0.84
PHGDH-222ENST00000641587 KIR2DS5A0A0G2JLQ3 304 aa9.83□□□□□ -0.84
PHGDH-222ENST00000641587 A0A0G2JNG1 304 aa9.83□□□□□ -0.84
PHGDH-222ENST00000641587 C1orf232A0A0U1RR37 186 aa9.83□□□□□ -0.84
PHGDH-222ENST00000641587 TTLL8A6PVC2 850 aa9.83□□□□□ -0.84
PHGDH-222ENST00000641587 KIR2DS3K7RE56 304 aa9.83□□□□□ -0.84
PHGDH-222ENST00000641587 CTIFO43310 598 aaKnown RBP9.83□□□□□ -0.84
PHGDH-222ENST00000641587 GRID2O43424 1007 aa9.83□□□□□ -0.84
PHGDH-222ENST00000641587 VPS4BO75351 444 aa9.83□□□□□ -0.84
PHGDH-222ENST00000641587 CREG1O75629 220 aa9.83□□□□□ -0.84
PHGDH-222ENST00000641587 RASSF9O75901 435 aa9.83□□□□□ -0.84
PHGDH-222ENST00000641587 ANXA9O76027 345 aa9.83□□□□□ -0.84
PHGDH-222ENST00000641587 SEC31AO94979 1220 aaKnown RBP9.83□□□□□ -0.84
PHGDH-222ENST00000641587 METTL18O95568 372 aa9.83□□□□□ -0.84
PHGDH-222ENST00000641587 APRTP07741 180 aa9.83□□□□□ -0.84
PHGDH-222ENST00000641587 ZNF8P17098 575 aaPredicted RBP9.83□□□□□ -0.84
PHGDH-222ENST00000641587 CD68P34810 354 aaPredicted RBP9.83□□□□□ -0.84
PHGDH-222ENST00000641587 SLC19A1P41440 591 aa9.83□□□□□ -0.84
PHGDH-222ENST00000641587 TNNT3P45378 269 aaPredicted RBP9.83□□□□□ -0.84
PHGDH-222ENST00000641587 SPINT3P49223 89 aa9.83□□□□□ -0.84
PHGDH-222ENST00000641587 PMS2P54278 862 aa9.83□□□□□ -0.84
PHGDH-222ENST00000641587 PLTPP55058 493 aa9.83□□□□□ -0.84
PHGDH-222ENST00000641587 PPP1CAP62136 330 aa9.83□□□□□ -0.84
PHGDH-222ENST00000641587 NIPAL4Q0D2K0 466 aa9.83□□□□□ -0.84
PHGDH-222ENST00000641587 DNASE1L3Q13609 305 aa9.83□□□□□ -0.84
PHGDH-222ENST00000641587 CUL1Q13616 776 aa9.83□□□□□ -0.84
PHGDH-222ENST00000641587 KIR2DS5Q14953 304 aa9.83□□□□□ -0.84
PHGDH-222ENST00000641587 TRADDQ15628 312 aa9.83□□□□□ -0.84
PHGDH-222ENST00000641587 PARP6Q2NL67 630 aa9.83□□□□□ -0.84
PHGDH-222ENST00000641587 PRR30Q53SZ7 412 aaPredicted RBP9.83□□□□□ -0.84
PHGDH-222ENST00000641587 RALGPS1Q5JS13 557 aa9.83□□□□□ -0.84
PHGDH-222ENST00000641587 ALS2CLQ60I27 953 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms