RNA–Protein interactions for RNA: ENST00000631321.1

LINC00540-203, long intergenic non-protein coding RNA 540, humanhuman

TSL 2 BASIC

Gene LINC00540, Length 2,412 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00540-203ENST00000631321 ALDH3A2P51648 485 aa12.56□□□□□ -0.4
LINC00540-203ENST00000631321 ARSFP54793 590 aa12.56□□□□□ -0.4
LINC00540-203ENST00000631321 PMS2P3Q13401 168 aa12.56□□□□□ -0.4
LINC00540-203ENST00000631321 RFTN2Q52LD8 501 aaPredicted RBP12.56□□□□□ -0.4
LINC00540-203ENST00000631321 LINGO4Q6UY18 593 aa12.56□□□□□ -0.4
LINC00540-203ENST00000631321 C16orf59Q7L2K0 433 aa12.56□□□□□ -0.4
LINC00540-203ENST00000631321 FAM126BQ8IXS8 530 aa12.56□□□□□ -0.4
LINC00540-203ENST00000631321 ZNF583Q96ND8 569 aa12.56□□□□□ -0.4
LINC00540-203ENST00000631321 TUBA1CQ9BQE3 449 aa12.56□□□□□ -0.4
LINC00540-203ENST00000631321 OSBPL6Q9BZF3 934 aa12.56□□□□□ -0.4
LINC00540-203ENST00000631321 PREBQ9HCU5 417 aa12.56□□□□□ -0.4
LINC00540-203ENST00000631321 SMPD4Q9NXE4 827 aa12.56□□□□□ -0.4
LINC00540-203ENST00000631321 MTRRQ9UBK8 725 aa12.56□□□□□ -0.4
LINC00540-203ENST00000631321 FNDC3AQ9Y2H6 1198 aaKnown RBP12.56□□□□□ -0.4
LINC00540-203ENST00000631321 OARD1Q9Y530 152 aa12.56□□□□□ -0.4
LINC00540-203ENST00000631321 POLR3HQ9Y535 204 aaPredicted RBP12.56□□□□□ -0.4
LINC00540-203ENST00000631321 GMEB1Q9Y692 573 aa12.56□□□□□ -0.4
LINC00540-203ENST00000631321 A0A0J9YVX5 310 aa12.56□□□□□ -0.4
LINC00540-203ENST00000631321 NT5C1B-RDH14C9J2C7 533 aa12.56□□□□□ -0.4
LINC00540-203ENST00000631321 TAPBPO15533 448 aa12.56□□□□□ -0.4
LINC00540-203ENST00000631321 NBNO60934 754 aa12.56□□□□□ -0.4
LINC00540-203ENST00000631321 EFEMP2O95967 443 aa12.56□□□□□ -0.4
LINC00540-203ENST00000631321 HPRP00739 348 aa12.56□□□□□ -0.4
LINC00540-203ENST00000631321 CNPP09543 421 aaKnown RBP12.56□□□□□ -0.4
LINC00540-203ENST00000631321 SELPP16109 830 aa12.56□□□□□ -0.4
LINC00540-203ENST00000631321 ZNF7P17097 686 aaPredicted RBP12.56□□□□□ -0.4
LINC00540-203ENST00000631321 SOX11P35716 441 aa12.56□□□□□ -0.4
LINC00540-203ENST00000631321 DGKQP52824 942 aa12.56□□□□□ -0.4
LINC00540-203ENST00000631321 MTPNP58546 118 aa12.56□□□□□ -0.4
LINC00540-203ENST00000631321 DAG1Q14118 895 aa12.56□□□□□ -0.4
LINC00540-203ENST00000631321 GPNMBQ14956 572 aa12.56□□□□□ -0.4
LINC00540-203ENST00000631321 RAB39AQ14964 217 aa12.56□□□□□ -0.4
LINC00540-203ENST00000631321 FAM98BQ52LJ0 330 aaKnown RBP12.56□□□□□ -0.4
LINC00540-203ENST00000631321 METTL2BQ6P1Q9 378 aaKnown RBP12.56□□□□□ -0.4
LINC00540-203ENST00000631321 MILR1Q7Z6M3 343 aa12.56□□□□□ -0.4
LINC00540-203ENST00000631321 CROCCP3Q8IVE0 287 aa12.56□□□□□ -0.4
LINC00540-203ENST00000631321 CRIPAKQ8N1N5 446 aa12.56□□□□□ -0.4
LINC00540-203ENST00000631321 OR52E4Q8NGH9 312 aa12.56□□□□□ -0.4
LINC00540-203ENST00000631321 ITFG1Q8TB96 612 aa12.56□□□□□ -0.4
LINC00540-203ENST00000631321 UBTD2Q8WUN7 234 aa12.56□□□□□ -0.4
LINC00540-203ENST00000631321 PIH1D2Q8WWB5 315 aa12.56□□□□□ -0.4
LINC00540-203ENST00000631321 WBP2Q969T9 261 aa12.56□□□□□ -0.4
LINC00540-203ENST00000631321 RDH12Q96NR8 316 aa12.56□□□□□ -0.4
LINC00540-203ENST00000631321 TSEN34Q9BSV6 310 aaKnown RBP12.56□□□□□ -0.4
LINC00540-203ENST00000631321 PIF1Q9H611 641 aa12.56□□□□□ -0.4
LINC00540-203ENST00000631321 IPPKQ9H8X2 491 aa12.56□□□□□ -0.4
LINC00540-203ENST00000631321 ELOVL2Q9NXB9 296 aa12.56□□□□□ -0.4
LINC00540-203ENST00000631321 ASIC5Q9NY37 505 aa12.56□□□□□ -0.4
LINC00540-203ENST00000631321 DNMT3BQ9UBC3 853 aaKnown RBP12.56□□□□□ -0.4
LINC00540-203ENST00000631321 CDC14AQ9UNH5 594 aa12.56□□□□□ -0.4
LINC00540-203ENST00000631321 PCDHB9Q9Y5E1 797 aa12.56□□□□□ -0.4
LINC00540-203ENST00000631321 OR51B4Q9Y5P0 310 aa12.56□□□□□ -0.4
LINC00540-203ENST00000631321 PGLSO95336 258 aa12.55□□□□□ -0.4
LINC00540-203ENST00000631321 CPNE6O95741 557 aa12.55□□□□□ -0.4
LINC00540-203ENST00000631321 ALBP02768 609 aa12.55□□□□□ -0.4
LINC00540-203ENST00000631321 ALPLP05186 524 aa12.55□□□□□ -0.4
LINC00540-203ENST00000631321 HMOX2P30519 316 aa12.55□□□□□ -0.4
LINC00540-203ENST00000631321 GRSF1Q12849 480 aaKnown RBP eCLIP12.55□□□□□ -0.4
LINC00540-203ENST00000631321 PTRHD1Q6GMV3 140 aaKnown RBP12.55□□□□□ -0.4
LINC00540-203ENST00000631321 SERPINA9Q86WD7 417 aa12.55□□□□□ -0.4
LINC00540-203ENST00000631321 NPAS4Q8IUM7 802 aa12.55□□□□□ -0.4
LINC00540-203ENST00000631321 SLC13A3Q8WWT9 602 aa12.55□□□□□ -0.4
LINC00540-203ENST00000631321 MRPL9Q9BYD2 267 aaKnown RBP12.55□□□□□ -0.4
LINC00540-203ENST00000631321 GPR63Q9BZJ6 419 aa12.55□□□□□ -0.4
LINC00540-203ENST00000631321 CLPBQ9H078 707 aa12.55□□□□□ -0.4
LINC00540-203ENST00000631321 SOX17Q9H6I2 414 aaPredicted RBP12.55□□□□□ -0.4
LINC00540-203ENST00000631321 POLR1BQ9H9Y6 1135 aa12.55□□□□□ -0.4
LINC00540-203ENST00000631321 TRPM5Q9NZQ8 1165 aa12.55□□□□□ -0.4
LINC00540-203ENST00000631321 TMEM9Q9P0T7 183 aa12.55□□□□□ -0.4
LINC00540-203ENST00000631321 GNPTGQ9UJJ9 305 aa12.55□□□□□ -0.4
LINC00540-203ENST00000631321 HEMK1Q9Y5R4 338 aaPredicted RBP12.55□□□□□ -0.4
LINC00540-203ENST00000631321 BACE2Q9Y5Z0 518 aa12.55□□□□□ -0.4
LINC00540-203ENST00000631321 ZFC3H1O60293 1989 aaKnown RBP12.55□□□□□ -0.4
LINC00540-203ENST00000631321 CASP8AP2Q9UKL3 1982 aa12.55□□□□□ -0.4
LINC00540-203ENST00000631321 TRBV5-4A0A0C4DH59 114 aa12.54□□□□□ -0.4
LINC00540-203ENST00000631321 WDR47O94967 919 aa12.54□□□□□ -0.4
LINC00540-203ENST00000631321 KCNH1O95259 989 aa12.54□□□□□ -0.4
LINC00540-203ENST00000631321 LATS1O95835 1130 aa12.54□□□□□ -0.4
LINC00540-203ENST00000631321 JUNBP17275 347 aaPredicted RBP12.54□□□□□ -0.4
LINC00540-203ENST00000631321 MZF1P28698 734 aaPredicted RBP12.54□□□□□ -0.4
LINC00540-203ENST00000631321 RGS4P49798 205 aa12.54□□□□□ -0.4
LINC00540-203ENST00000631321 RHOAP61586 193 aa12.54□□□□□ -0.4
LINC00540-203ENST00000631321 AP1S1P61966 158 aa12.54□□□□□ -0.4
LINC00540-203ENST00000631321 TWF1Q12792 350 aa12.54□□□□□ -0.4
LINC00540-203ENST00000631321 MAD2L1Q13257 205 aaPredicted RBP12.54□□□□□ -0.4
LINC00540-203ENST00000631321 ARMC12Q5T9G4 340 aa12.54□□□□□ -0.4
LINC00540-203ENST00000631321 ZNF773Q6PK81 442 aa12.54□□□□□ -0.4
LINC00540-203ENST00000631321 KCTD8Q6ZWB6 473 aa12.54□□□□□ -0.4
LINC00540-203ENST00000631321 TRIM46Q7Z4K8 759 aa12.54□□□□□ -0.4
LINC00540-203ENST00000631321 HOMEZQ8IX15 550 aa12.54□□□□□ -0.4
LINC00540-203ENST00000631321 RBFAQ8N0V3 343 aa12.54□□□□□ -0.4
LINC00540-203ENST00000631321 GLB1L3Q8NCI6 653 aaPredicted RBP12.54□□□□□ -0.4
LINC00540-203ENST00000631321 DBF4BQ8NFT6 615 aa12.54□□□□□ -0.4
LINC00540-203ENST00000631321 GTF2H4Q92759 462 aa12.54□□□□□ -0.4
LINC00540-203ENST00000631321 TMBIM1Q969X1 311 aa12.54□□□□□ -0.4
LINC00540-203ENST00000631321 CCDC97Q96F63 343 aaPredicted RBP12.54□□□□□ -0.4
LINC00540-203ENST00000631321 ZIC5Q96T25 663 aa12.54□□□□□ -0.4
LINC00540-203ENST00000631321 CIPCQ9C0C6 399 aa12.54□□□□□ -0.4
LINC00540-203ENST00000631321 RNF38Q9H0F5 515 aa12.54□□□□□ -0.4
LINC00540-203ENST00000631321 NSUN3Q9H649 340 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms