RNA–Protein interactions for RNA: ENST00000628391.1

TCF4-264, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 201 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-264ENST00000628391 RFPL4AL1F8VTS6 287 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 H0YCG3 227 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 DNASE2O00115 360 aaPredicted RBP1.89□□□□□ -2.11
TCF4-264ENST00000628391 UBXN8O00124 270 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 SGK1O00141 431 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 AIPO00170 330 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 KCNK1O00180 336 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 CDC7O00311 574 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 SULT1C2O00338 296 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 SLC1A7O00341 560 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 TRAF5O00463 557 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 AP3D1O14617 1153 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 PPEF2O14830 753 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 PHYHO14832 338 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 AIM2O14862 343 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 MYL12BO14950 172 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 SYN3O14994 580 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 PER2O15055 1255 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 TO15178 435 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 ADAM12O43184 909 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 PROM1O43490 865 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 DCXO43602 365 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 LIASO43766 372 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 SSX4O60224 188 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 PRPSAP2O60256 369 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 PCDHGA12O60330 932 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 NRP2O60462 931 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 SELENOFO60613 162 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 PEX10O60683 326 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 UGDHO60701 494 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 HCN1O60741 890 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 XYLBO75191 536 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 LRCH4O75427 683 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 PAGE1O75459 146 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 STX11O75558 287 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 LYPLA1O75608 230 aaPredicted RBP1.89□□□□□ -2.11
TCF4-264ENST00000628391 TIPRLO75663 272 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 CDC123O75794 336 aaPredicted RBP1.89□□□□□ -2.11
TCF4-264ENST00000628391 EIF3GO75821 320 aaKnown RBP eCLIP1.89□□□□□ -2.11
TCF4-264ENST00000628391 ZMPSTE24O75844 475 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 KRT34O76011 436 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 CNTN5O94779 1100 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 ZBTB7AO95365 584 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 GCNT3O95395 438 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 PTBP3O95758 552 aaKnown RBP1.89□□□□□ -2.11
TCF4-264ENST00000628391 PAK4O96013 591 aaPredicted RBP1.89□□□□□ -2.11
TCF4-264ENST00000628391 POMCP01189 267 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 IFNA2P01563 188 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 MBP02144 154 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 DNTTP04053 509 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 PCCAP05165 728 aaPredicted RBP1.89□□□□□ -2.11
TCF4-264ENST00000628391 ALPLP05186 524 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 GPIP06744 558 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 KLK3P07288 261 aaPredicted RBP1.89□□□□□ -2.11
TCF4-264ENST00000628391 PFKMP08237 780 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 HTR1AP08908 422 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 CD63P08962 238 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 ACAA1P09110 424 aaPredicted RBP1.89□□□□□ -2.11
TCF4-264ENST00000628391 CTSHP09668 335 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 ZDHHC11BP0C7U3 371 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 DUX4L2P0CJ85 424 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 DUX4L3P0CJ86 424 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 DUX4L4P0CJ87 422 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 DUX4L5P0CJ88 424 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 DUX4L6P0CJ89 424 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 DUX4L7P0CJ90 424 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 RNF224P0DH78 156 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 ITGAMP11215 1152 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 FGF3P11487 239 aaPredicted RBP1.89□□□□□ -2.11
TCF4-264ENST00000628391 MYCLP12524 364 aaPredicted RBP1.89□□□□□ -2.11
TCF4-264ENST00000628391 CD36P16671 472 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 ZNF8P17098 575 aaPredicted RBP1.89□□□□□ -2.11
TCF4-264ENST00000628391 CTPS1P17812 591 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 SPI1P17947 270 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 MYL12AP19105 171 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 OGNP20774 298 aaKnown RBP1.89□□□□□ -2.11
TCF4-264ENST00000628391 CAPN3P20807 821 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 C4BPBP20851 252 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 ATP6V1B2P21281 511 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 TNFAIP3P21580 790 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 CPN2P22792 545 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 XPAP23025 273 aaPredicted RBP1.89□□□□□ -2.11
TCF4-264ENST00000628391 WARSP23381 471 aaKnown RBP1.89□□□□□ -2.11
TCF4-264ENST00000628391 MYL9P24844 172 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 FASP25445 335 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 DDX6P26196 483 aaKnown RBP eCLIP1.89□□□□□ -2.11
TCF4-264ENST00000628391 PAX6P26367 422 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 CNTFP26441 200 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 PTBP1P26599 531 aaKnown RBP eCLIP1.89□□□□□ -2.11
TCF4-264ENST00000628391 RPL10P27635 214 aaKnown RBP1.89□□□□□ -2.11
TCF4-264ENST00000628391 POU1F1P28069 291 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 ELK4P28324 431 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 LAP3P28838 519 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 GTF2E2P29084 291 aaKnown RBP1.89□□□□□ -2.11
TCF4-264ENST00000628391 ADORA2AP29274 412 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 PDHA2P29803 388 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 ALDH4A1P30038 563 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 CD6P30203 668 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 HOXC12P31275 282 aa1.89□□□□□ -2.11
TCF4-264ENST00000628391 SHMT2P34897 504 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms