RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 OR2M4Q96R27 311 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 TCF12Q99081 682 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 SPRY4Q9C004 299 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 PRDM8Q9NQV8 689 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 FKBP14Q9NWM8 211 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 CTTNBP2NLQ9P2B4 639 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 VPS4AQ9UN37 437 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 SH3GLB1Q9Y371 365 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 KCTD3Q9Y597 815 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 PCDHGC4Q9Y5F7 938 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 KCNMB2Q9Y691 235 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 FAM169AQ9Y6X4 670 aa8.44□□□□□ -1.06
GPC6-202ENST00000617456 A0A0B4J203 849 aa8.43□□□□□ -1.06
GPC6-202ENST00000617456 TTLL8A6PVC2 850 aa8.43□□□□□ -1.06
GPC6-202ENST00000617456 POLR1CO15160 346 aaPredicted RBP8.43□□□□□ -1.06
GPC6-202ENST00000617456 VIMP08670 466 aaKnown RBP8.43□□□□□ -1.06
GPC6-202ENST00000617456 RNF224P0DH78 156 aa8.43□□□□□ -1.06
GPC6-202ENST00000617456 TCF4P15884 667 aa8.43□□□□□ -1.06
GPC6-202ENST00000617456 F8A1P23610 371 aa8.43□□□□□ -1.06
GPC6-202ENST00000617456 DLSTP36957 453 aa8.43□□□□□ -1.06
GPC6-202ENST00000617456 STAT5AP42229 794 aa8.43□□□□□ -1.06
GPC6-202ENST00000617456 GPR1P46091 355 aa8.43□□□□□ -1.06
GPC6-202ENST00000617456 NR2C2P49116 596 aa8.43□□□□□ -1.06
GPC6-202ENST00000617456 HADHBP55084 474 aaKnown RBP8.43□□□□□ -1.06
GPC6-202ENST00000617456 PTSQ03393 145 aa8.43□□□□□ -1.06
GPC6-202ENST00000617456 TRAF2Q12933 501 aa8.43□□□□□ -1.06
GPC6-202ENST00000617456 PTPRRQ15256 657 aa8.43□□□□□ -1.06
GPC6-202ENST00000617456 TAF11Q15544 211 aa8.43□□□□□ -1.06
GPC6-202ENST00000617456 CMPK2Q5EBM0 449 aa8.43□□□□□ -1.06
GPC6-202ENST00000617456 CFAP157Q5JU67 520 aa8.43□□□□□ -1.06
GPC6-202ENST00000617456 NCBP2-AS2Q69YL0 99 aa8.43□□□□□ -1.06
GPC6-202ENST00000617456 PDPK2PQ6A1A2 396 aa8.43□□□□□ -1.06
GPC6-202ENST00000617456 TXNRD3NBQ6F5E7 133 aa8.43□□□□□ -1.06
GPC6-202ENST00000617456 FIP1L1Q6UN15 594 aaKnown RBP8.43□□□□□ -1.06
GPC6-202ENST00000617456 C3orf62Q6ZUJ4 267 aa8.43□□□□□ -1.06
GPC6-202ENST00000617456 B4GALNT4Q76KP1 1039 aa8.43□□□□□ -1.06
GPC6-202ENST00000617456 HSD11B1LQ7Z5J1 315 aa8.43□□□□□ -1.06
GPC6-202ENST00000617456 TMEM135Q86UB9 458 aa8.43□□□□□ -1.06
GPC6-202ENST00000617456 HOOK3Q86VS8 718 aa8.43□□□□□ -1.06
GPC6-202ENST00000617456 CNGA4Q8IV77 575 aa8.43□□□□□ -1.06
GPC6-202ENST00000617456 CCDC13Q8IYE1 715 aa8.43□□□□□ -1.06
GPC6-202ENST00000617456 EXD1Q8NHP7 514 aa8.43□□□□□ -1.06
GPC6-202ENST00000617456 GSDMBQ8TAX9 411 aa8.43□□□□□ -1.06
GPC6-202ENST00000617456 CCDC110Q8TBZ0 833 aa8.43□□□□□ -1.06
GPC6-202ENST00000617456 DTX3LQ8TDB6 740 aa8.43□□□□□ -1.06
GPC6-202ENST00000617456 SLC37A2Q8TED4 501 aa8.43□□□□□ -1.06
GPC6-202ENST00000617456 SSC4DQ8WTU2 575 aa8.43□□□□□ -1.06
GPC6-202ENST00000617456 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.43□□□□□ -1.06
GPC6-202ENST00000617456 SNF8Q96H20 258 aa8.43□□□□□ -1.06
GPC6-202ENST00000617456 CCDC42Q96M95 316 aa8.43□□□□□ -1.06
GPC6-202ENST00000617456 NSMCE3Q96MG7 304 aa8.43□□□□□ -1.06
GPC6-202ENST00000617456 ZPBPQ9BS86 351 aa8.43□□□□□ -1.06
GPC6-202ENST00000617456 ADGRE3Q9BY15 652 aa8.43□□□□□ -1.06
GPC6-202ENST00000617456 BRINP2Q9C0B6 783 aa8.43□□□□□ -1.06
GPC6-202ENST00000617456 TRIT1Q9H3H1 467 aaKnown RBP8.43□□□□□ -1.06
GPC6-202ENST00000617456 RAD18Q9NS91 495 aa8.43□□□□□ -1.06
GPC6-202ENST00000617456 VPS18Q9P253 973 aa8.43□□□□□ -1.06
GPC6-202ENST00000617456 CD84Q9UIB8 345 aa8.43□□□□□ -1.06
GPC6-202ENST00000617456 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.43□□□□□ -1.06
GPC6-202ENST00000617456 PCDHB3Q9Y5E6 796 aa8.43□□□□□ -1.06
GPC6-202ENST00000617456 A0A0U1RQS6 177 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 LINC00854A0A1B0GVQ3 168 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 CDC14CA4D256 554 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 HTR3EA5X5Y0 456 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 NPIPB15A6NHN6 443 aaPredicted RBP8.42□□□□□ -1.06
GPC6-202ENST00000617456 ANKRD66B4E2M5 251 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 AKR1B10O60218 316 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 SEMA7AO75326 666 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 RFPL1O75677 317 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 B3GALNT1O75752 331 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 EML2O95834 649 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 DLGAP3O95886 979 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 FURINP09958 794 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 ZNF28P17035 718 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 KDELR1P24390 212 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 IFI35P80217 286 aaPredicted RBP8.42□□□□□ -1.06
GPC6-202ENST00000617456 HHEXQ03014 270 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 FOXM1Q08050 763 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 BRD3Q15059 726 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 PDK1Q15118 436 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 SNCBQ16143 134 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 SLC9A4Q6AI14 798 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 ZNF787Q6DD87 383 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 TCTN3Q6NUS6 607 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 IRGCQ6NXR0 463 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 RFLNAQ6ZTI6 216 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 Q6ZVL8 140 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 GRAMD2AQ8IUY3 354 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 VSTM4Q8IW00 320 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 TP53INP2Q8IXH6 220 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 C17orf53Q8N3J3 647 aaPredicted RBP8.42□□□□□ -1.06
GPC6-202ENST00000617456 RNF10Q8N5U6 811 aaKnown RBP8.42□□□□□ -1.06
GPC6-202ENST00000617456 AVL9Q8NBF6 648 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 GALNT6Q8NCL4 622 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 ARRDC2Q8TBH0 407 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 CPT1CQ8TCG5 803 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 CCHCR1Q8TD31 782 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 CDKL2Q92772 493 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 POM121Q96HA1 1249 aa8.42□□□□□ -1.06
GPC6-202ENST00000617456 COX14Q96I36 57 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms