RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.92□□□□□ -0.02
SMG6-220ENST00000576218 IGLV3-16A0A075B6K0 115 aa14.92□□□□□ -0.02
SMG6-220ENST00000576218 PRAMEF33A0A0G2JMD5 474 aa14.92□□□□□ -0.02
SMG6-220ENST00000576218 C17orf113A0A1B0GUU1 675 aa14.92□□□□□ -0.02
SMG6-220ENST00000576218 PRR19A6NJB7 356 aa14.92□□□□□ -0.02
SMG6-220ENST00000576218 CDRT15L2A8MXV6 281 aa14.92□□□□□ -0.02
SMG6-220ENST00000576218 GOLGA8MH3BSY2 632 aa14.92□□□□□ -0.02
SMG6-220ENST00000576218 PFDN6O15212 129 aa14.92□□□□□ -0.02
SMG6-220ENST00000576218 CAPN5O15484 640 aaPredicted RBP14.92□□□□□ -0.02
SMG6-220ENST00000576218 PRAMEF10O60809 474 aa14.92□□□□□ -0.02
SMG6-220ENST00000576218 GSTM1P09488 218 aa14.92□□□□□ -0.02
SMG6-220ENST00000576218 CCL4P13236 92 aa14.92□□□□□ -0.02
SMG6-220ENST00000576218 ITPKBP27987 946 aa14.92□□□□□ -0.02
SMG6-220ENST00000576218 NDUFS1P28331 727 aa14.92□□□□□ -0.02
SMG6-220ENST00000576218 PAFAH1B1P43034 410 aa14.92□□□□□ -0.02
SMG6-220ENST00000576218 CAPZBP47756 277 aa14.92□□□□□ -0.02
SMG6-220ENST00000576218 GSTM4Q03013 218 aa14.92□□□□□ -0.02
SMG6-220ENST00000576218 CFHR1Q03591 330 aa14.92□□□□□ -0.02
SMG6-220ENST00000576218 BRD3Q15059 726 aa14.92□□□□□ -0.02
SMG6-220ENST00000576218 CYP1B1Q16678 543 aa14.92□□□□□ -0.02
SMG6-220ENST00000576218 DUS1LQ6P1R4 473 aaKnown RBP14.92□□□□□ -0.02
SMG6-220ENST00000576218 PACS1Q6VY07 963 aa14.92□□□□□ -0.02
SMG6-220ENST00000576218 CLEC14AQ86T13 490 aa14.92□□□□□ -0.02
SMG6-220ENST00000576218 SPACA3Q8IXA5 215 aa14.92□□□□□ -0.02
SMG6-220ENST00000576218 SPDYE1Q8NFV5 336 aaPredicted RBP14.92□□□□□ -0.02
SMG6-220ENST00000576218 GPR150Q8NGU9 434 aa14.92□□□□□ -0.02
SMG6-220ENST00000576218 ART4Q93070 314 aa14.92□□□□□ -0.02
SMG6-220ENST00000576218 ZDHHC12Q96GR4 267 aa14.92□□□□□ -0.02
SMG6-220ENST00000576218 INSM2Q96T92 566 aaPredicted RBP14.92□□□□□ -0.02
SMG6-220ENST00000576218 SLC39A1Q9NY26 324 aa14.92□□□□□ -0.02
SMG6-220ENST00000576218 PCDHB11Q9Y5F2 797 aa14.92□□□□□ -0.02
SMG6-220ENST00000576218 PCDHGA7Q9Y5G6 932 aa14.92□□□□□ -0.02
SMG6-220ENST00000576218 SAR1BQ9Y6B6 198 aa14.92□□□□□ -0.02
SMG6-220ENST00000576218 PKD1L2Q7Z442 2459 aa14.92□□□□□ -0.02
SMG6-220ENST00000576218 DMXL2Q8TDJ6 3036 aa14.91□□□□□ -0.02
SMG6-220ENST00000576218 CD3EAPO15446 510 aaKnown RBP14.91□□□□□ -0.02
SMG6-220ENST00000576218 NDUFS3O75489 264 aa14.91□□□□□ -0.02
SMG6-220ENST00000576218 ETV5P41161 510 aa14.91□□□□□ -0.02
SMG6-220ENST00000576218 PREPP48147 710 aa14.91□□□□□ -0.02
SMG6-220ENST00000576218 TTPAP49638 278 aa14.91□□□□□ -0.02
SMG6-220ENST00000576218 ARL4DP49703 201 aa14.91□□□□□ -0.02
SMG6-220ENST00000576218 SEPHS1P49903 392 aa14.91□□□□□ -0.02
SMG6-220ENST00000576218 GFERP55789 205 aa14.91□□□□□ -0.02
SMG6-220ENST00000576218 KCNJ11Q14654 390 aa14.91□□□□□ -0.02
SMG6-220ENST00000576218 SDCCAG8Q86SQ7 713 aaPredicted RBP14.91□□□□□ -0.02
SMG6-220ENST00000576218 OOSP2Q86WS3 158 aa14.91□□□□□ -0.02
SMG6-220ENST00000576218 LILRA3Q8N6C8 439 aaPredicted RBP14.91□□□□□ -0.02
SMG6-220ENST00000576218 GSDMBQ8TAX9 411 aa14.91□□□□□ -0.02
SMG6-220ENST00000576218 RSC1A1Q92681 617 aa14.91□□□□□ -0.02
SMG6-220ENST00000576218 RMDN2Q96LZ7 410 aa14.91□□□□□ -0.02
SMG6-220ENST00000576218 TAAR9Q96RI9 348 aa14.91□□□□□ -0.02
SMG6-220ENST00000576218 FERD3LQ96RJ6 166 aa14.91□□□□□ -0.02
SMG6-220ENST00000576218 DPH1Q9BZG8 443 aa14.91□□□□□ -0.02
SMG6-220ENST00000576218 XAB2Q9HCS7 855 aaKnown RBP14.91□□□□□ -0.02
SMG6-220ENST00000576218 TCRBV7S3A2A0A539 114 aa14.9□□□□□ -0.02
SMG6-220ENST00000576218 UBA6A0AVT1 1052 aaPredicted RBP14.9□□□□□ -0.02
SMG6-220ENST00000576218 LIN7AO14910 233 aaPredicted RBP14.9□□□□□ -0.02
SMG6-220ENST00000576218 NVLO15381 856 aaKnown RBP14.9□□□□□ -0.02
SMG6-220ENST00000576218 SGTAO43765 313 aa14.9□□□□□ -0.02
SMG6-220ENST00000576218 OR1I1O60431 355 aa14.9□□□□□ -0.02
SMG6-220ENST00000576218 AVILO75366 819 aa14.9□□□□□ -0.02
SMG6-220ENST00000576218 ITGB6P18564 788 aa14.9□□□□□ -0.02
SMG6-220ENST00000576218 NMBRP28336 390 aa14.9□□□□□ -0.02
SMG6-220ENST00000576218 CSE1LP55060 971 aaKnown RBP14.9□□□□□ -0.02
SMG6-220ENST00000576218 UCNP55089 124 aa14.9□□□□□ -0.02
SMG6-220ENST00000576218 RAB15P59190 212 aa14.9□□□□□ -0.02
SMG6-220ENST00000576218 ACVR1Q04771 509 aa14.9□□□□□ -0.02
SMG6-220ENST00000576218 FOXM1Q08050 763 aa14.9□□□□□ -0.02
SMG6-220ENST00000576218 PRKAA1Q13131 559 aa14.9□□□□□ -0.02
SMG6-220ENST00000576218 RPA4Q13156 261 aa14.9□□□□□ -0.02
SMG6-220ENST00000576218 TMED2Q15363 201 aa14.9□□□□□ -0.02
SMG6-220ENST00000576218 DCAF12Q5T6F0 453 aa14.9□□□□□ -0.02
SMG6-220ENST00000576218 CACHD1Q5VU97 1274 aa14.9□□□□□ -0.02
SMG6-220ENST00000576218 ANKRD22Q5VYY1 191 aa14.9□□□□□ -0.02
SMG6-220ENST00000576218 PTRHD1Q6GMV3 140 aaKnown RBP14.9□□□□□ -0.02
SMG6-220ENST00000576218 MRNIPQ6NTE8 343 aa14.9□□□□□ -0.02
SMG6-220ENST00000576218 CES3Q6UWW8 571 aa14.9□□□□□ -0.02
SMG6-220ENST00000576218 FAM92BQ6ZTR7 304 aa14.9□□□□□ -0.02
SMG6-220ENST00000576218 KLHL7Q8IXQ5 586 aa14.9□□□□□ -0.02
SMG6-220ENST00000576218 CPT1BQ92523 772 aa14.9□□□□□ -0.02
SMG6-220ENST00000576218 C9orf72Q96LT7 481 aa14.9□□□□□ -0.02
SMG6-220ENST00000576218 ASPSCR1Q9BZE9 553 aa14.9□□□□□ -0.02
SMG6-220ENST00000576218 DDX47Q9H0S4 455 aaKnown RBP14.9□□□□□ -0.02
SMG6-220ENST00000576218 MRM3Q9HC36 420 aaKnown RBP14.9□□□□□ -0.02
SMG6-220ENST00000576218 SOX13Q9UN79 622 aa14.9□□□□□ -0.02
SMG6-220ENST00000576218 MAD1L1Q9Y6D9 718 aa14.9□□□□□ -0.02
SMG6-220ENST00000576218 PRSS21Q9Y6M0 314 aa14.9□□□□□ -0.02
SMG6-220ENST00000576218 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.9□□□□□ -0.02
SMG6-220ENST00000576218 BPTFQ12830 3046 aa14.9□□□□□ -0.02
SMG6-220ENST00000576218 MN1Q10571 1320 aaPredicted RBP14.9□□□□□ -0.02
SMG6-220ENST00000576218 TMEM63AO94886 807 aa14.89□□□□□ -0.03
SMG6-220ENST00000576218 VAPBO95292 243 aa14.89□□□□□ -0.03
SMG6-220ENST00000576218 FGF3P11487 239 aaPredicted RBP14.89□□□□□ -0.03
SMG6-220ENST00000576218 PSMA3P25788 255 aa14.89□□□□□ -0.03
SMG6-220ENST00000576218 CD82P27701 267 aa14.89□□□□□ -0.03
SMG6-220ENST00000576218 LEPRP48357 1165 aaKnown RBP14.89□□□□□ -0.03
SMG6-220ENST00000576218 TMPRSS3P57727 454 aa14.89□□□□□ -0.03
SMG6-220ENST00000576218 CXADRP78310 365 aa14.89□□□□□ -0.03
SMG6-220ENST00000576218 PLOD1Q02809 727 aaPredicted RBP14.89□□□□□ -0.03
SMG6-220ENST00000576218 DNTTIP2Q5QJE6 756 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms