RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 VSTM4Q8IW00 320 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 CFAP206Q8IYR0 622 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 FAM26EQ8N5C1 309 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 SLC38A9Q8NBW4 561 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 RNF214Q8ND24 703 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 OR4E2Q8NGC2 313 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 OR4K2Q8NGD2 314 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 ZNF514Q96K75 400 aaPredicted RBP8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 RMDN2Q96LZ7 410 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 FAM118BQ9BPY3 351 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 FSD1LQ9BXM9 530 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 TLR10Q9BXR5 811 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 RAB33BQ9H082 229 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 KLHL25Q9H0H3 589 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 CHST8Q9H2A9 424 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 ASB8Q9H765 288 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 SOHLH2Q9NX45 425 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 HACD3Q9P035 362 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 LUZP4Q9P127 313 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 SEMA5BQ9P283 1151 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 SLC24A2Q9UI40 661 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 FKBPLQ9UIM3 349 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 PCDHGA6Q9Y5G7 932 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 ALG6Q9Y672 507 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 CNTRLQ7Z7A1 2325 aa8.39□□□□□ -1.07
CTDNEP1-203ENST00000570385 hCG_1818297A0A087WSY0 165 aa8.39□□□□□ -1.07
CTDNEP1-203ENST00000570385 MACROD2A1Z1Q3 448 aa8.39□□□□□ -1.07
CTDNEP1-203ENST00000570385 CLEC18AA5D8T8 446 aa8.39□□□□□ -1.07
CTDNEP1-203ENST00000570385 MGAT4DA6NG13 374 aa8.39□□□□□ -1.07
CTDNEP1-203ENST00000570385 TLCD2A6NGC4 264 aa8.39□□□□□ -1.07
CTDNEP1-203ENST00000570385 SLC9B1P1A6NJY1 282 aa8.39□□□□□ -1.07
CTDNEP1-203ENST00000570385 C21orf140B9A014 251 aa8.39□□□□□ -1.07
CTDNEP1-203ENST00000570385 KCNJ13O60928 360 aa8.39□□□□□ -1.07
CTDNEP1-203ENST00000570385 ZRANB2O95218 330 aaKnown RBP eCLIP8.39□□□□□ -1.07
CTDNEP1-203ENST00000570385 TPM1P09493 284 aa8.39□□□□□ -1.07
CTDNEP1-203ENST00000570385 SLC35G4P0C7Q5 338 aa8.39□□□□□ -1.07
CTDNEP1-203ENST00000570385 GP1BBP13224 206 aa8.39□□□□□ -1.07
CTDNEP1-203ENST00000570385 HLA-DPA1P20036 260 aa8.39□□□□□ -1.07
CTDNEP1-203ENST00000570385 GNLYP22749 145 aa8.39□□□□□ -1.07
CTDNEP1-203ENST00000570385 RBL1P28749 1068 aa8.39□□□□□ -1.07
CTDNEP1-203ENST00000570385 KPNA2P52292 529 aaKnown RBP8.39□□□□□ -1.07
CTDNEP1-203ENST00000570385 RPS15P62841 145 aaKnown RBP8.39□□□□□ -1.07
CTDNEP1-203ENST00000570385 PDE1BQ01064 536 aa8.39□□□□□ -1.07
CTDNEP1-203ENST00000570385 MPP3Q13368 585 aa8.39□□□□□ -1.07
CTDNEP1-203ENST00000570385 ITGA9Q13797 1035 aa8.39□□□□□ -1.07
CTDNEP1-203ENST00000570385 SPARCL1Q14515 664 aa8.39□□□□□ -1.07
CTDNEP1-203ENST00000570385 CCDC181Q5TID7 509 aa8.39□□□□□ -1.07
CTDNEP1-203ENST00000570385 CLEC18BQ6UXF7 455 aa8.39□□□□□ -1.07
CTDNEP1-203ENST00000570385 OOSP2Q86WS3 158 aa8.39□□□□□ -1.07
CTDNEP1-203ENST00000570385 D2HGDHQ8N465 521 aa8.39□□□□□ -1.07
CTDNEP1-203ENST00000570385 CLEC18CQ8NCF0 446 aa8.39□□□□□ -1.07
CTDNEP1-203ENST00000570385 OR13C4Q8NGS5 318 aa8.39□□□□□ -1.07
CTDNEP1-203ENST00000570385 KRT35Q92764 455 aa8.39□□□□□ -1.07
CTDNEP1-203ENST00000570385 QKIQ96PU8 341 aaKnown RBP eCLIP8.39□□□□□ -1.07
CTDNEP1-203ENST00000570385 GORASP1Q9BQQ3 440 aa8.39□□□□□ -1.07
CTDNEP1-203ENST00000570385 ANP32EQ9BTT0 268 aa8.39□□□□□ -1.07
CTDNEP1-203ENST00000570385 SLC25A23Q9BV35 468 aa8.39□□□□□ -1.07
CTDNEP1-203ENST00000570385 ACSS2Q9NR19 701 aa8.39□□□□□ -1.07
CTDNEP1-203ENST00000570385 KCND1Q9NSA2 647 aa8.39□□□□□ -1.07
CTDNEP1-203ENST00000570385 FARSAQ9Y285 508 aaKnown RBP8.39□□□□□ -1.07
CTDNEP1-203ENST00000570385 MDC1Q14676 2089 aaKnown RBP8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 PIKFYVEQ9Y2I7 2098 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 HIVEP3Q5T1R4 2406 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 CCDC66A2RUB6 948 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 GSAPA4D1B5 854 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 A6NL46 340 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 C2orf81A6NN90 581 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 PSTPIP1O43586 416 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 SGTAO43765 313 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 CPNE3O75131 537 aaKnown RBP8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 VPS4BO75351 444 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 SRP72O76094 671 aaKnown RBP8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 ZBTB11O95625 1053 aaPredicted RBP8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 KLK3P07288 261 aaPredicted RBP8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 PRSS56P0CW18 603 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 PVRP15151 417 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 LPOP22079 712 aaPredicted RBP8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 CDH3P22223 829 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 PSMB4P28070 264 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 PTGIRP43119 386 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 MAGEA1P43355 309 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 LMAN1P49257 510 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 CDKN1CP49918 316 aaPredicted RBP8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 PGDP52209 483 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 TUBB4BP68371 445 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 ABRQ12979 859 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 TUBB2AQ13885 445 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 TAF1AQ15573 450 aaPredicted RBP8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 UGT8Q16880 541 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 PTCHD3Q3KNS1 767 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 PRR30Q53SZ7 412 aaPredicted RBP8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 PLEKHS1Q5SXH7 462 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 TMTC4Q5T4D3 741 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 CYB5D1Q6P9G0 228 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 SYVN1Q86TM6 617 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 KMT5CQ86Y97 462 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 APLFQ8IW19 511 aaPredicted RBP8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 KATNAL2Q8IYT4 538 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 RCOR2Q8IZ40 523 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 EFCAB3Q8N7B9 438 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms