RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 PHBP35232 272 aa17.63■□□□□ 0.41
COMMD4-222ENST00000568034 PREPP48147 710 aa17.63■□□□□ 0.41
COMMD4-222ENST00000568034 CLCN7P51798 805 aa17.63■□□□□ 0.41
COMMD4-222ENST00000568034 MAZP56270 477 aaKnown RBP17.63■□□□□ 0.41
COMMD4-222ENST00000568034 NAB1Q13506 487 aa17.63■□□□□ 0.41
COMMD4-222ENST00000568034 GBX1Q14549 363 aa17.63■□□□□ 0.41
COMMD4-222ENST00000568034 CLCA4Q14CN2 919 aa17.63■□□□□ 0.41
COMMD4-222ENST00000568034 UAP1Q16222 522 aaPredicted RBP17.63■□□□□ 0.41
COMMD4-222ENST00000568034 RSPO4Q2I0M5 234 aaPredicted RBP17.63■□□□□ 0.41
COMMD4-222ENST00000568034 IYDQ6PHW0 289 aa17.63■□□□□ 0.41
COMMD4-222ENST00000568034 SFRP1Q8N474 314 aa17.63■□□□□ 0.41
COMMD4-222ENST00000568034 PPM1NQ8N819 430 aa17.63■□□□□ 0.41
COMMD4-222ENST00000568034 FAM136AQ96C01 138 aa17.63■□□□□ 0.41
COMMD4-222ENST00000568034 RMDN2Q96LZ7 410 aa17.63■□□□□ 0.41
COMMD4-222ENST00000568034 PANX3Q96QZ0 392 aa17.63■□□□□ 0.41
COMMD4-222ENST00000568034 CPNE1Q99829 537 aa17.63■□□□□ 0.41
COMMD4-222ENST00000568034 RHOJQ9H4E5 214 aa17.63■□□□□ 0.41
COMMD4-222ENST00000568034 LATS2Q9NRM7 1088 aa17.63■□□□□ 0.41
COMMD4-222ENST00000568034 CDV3Q9UKY7 258 aaKnown RBP17.63■□□□□ 0.41
COMMD4-222ENST00000568034 COMMD10Q9Y6G5 202 aa17.63■□□□□ 0.41
COMMD4-222ENST00000568034 PCNX2A6NKB5 2137 aa17.63■□□□□ 0.41
COMMD4-222ENST00000568034 PDZK1P1A8MUH7 402 aa17.62■□□□□ 0.41
COMMD4-222ENST00000568034 LIN7AO14910 233 aaPredicted RBP17.62■□□□□ 0.41
COMMD4-222ENST00000568034 FAM155BO75949 473 aa17.62■□□□□ 0.41
COMMD4-222ENST00000568034 GP5P40197 560 aa17.62■□□□□ 0.41
COMMD4-222ENST00000568034 CSE1LP55060 971 aaKnown RBP17.62■□□□□ 0.41
COMMD4-222ENST00000568034 CDKN2DP55273 166 aa17.62■□□□□ 0.41
COMMD4-222ENST00000568034 RPA4Q13156 261 aa17.62■□□□□ 0.41
COMMD4-222ENST00000568034 BOP1Q14137 746 aaKnown RBP17.62■□□□□ 0.41
COMMD4-222ENST00000568034 C14orf28Q4W4Y0 310 aa17.62■□□□□ 0.41
COMMD4-222ENST00000568034 VRK3Q8IV63 474 aa17.62■□□□□ 0.41
COMMD4-222ENST00000568034 CTAGE3PQ8IX95 158 aa17.62■□□□□ 0.41
COMMD4-222ENST00000568034 DEFB124Q8NES8 71 aa17.62■□□□□ 0.41
COMMD4-222ENST00000568034 SPDYE1Q8NFV5 336 aaPredicted RBP17.62■□□□□ 0.41
COMMD4-222ENST00000568034 UHMK1Q8TAS1 419 aaKnown RBP17.62■□□□□ 0.41
COMMD4-222ENST00000568034 SLC37A2Q8TED4 501 aa17.62■□□□□ 0.41
COMMD4-222ENST00000568034 ATXN7L3BQ96GX2 97 aa17.62■□□□□ 0.41
COMMD4-222ENST00000568034 VPS39Q96JC1 886 aa17.62■□□□□ 0.41
COMMD4-222ENST00000568034 CNDP2Q96KP4 475 aaKnown RBP17.62■□□□□ 0.41
COMMD4-222ENST00000568034 OLFM1Q99784 485 aa17.62■□□□□ 0.41
COMMD4-222ENST00000568034 TSSK1BQ9BXA7 367 aa17.62■□□□□ 0.41
COMMD4-222ENST00000568034 WWP1Q9H0M0 922 aa17.62■□□□□ 0.41
COMMD4-222ENST00000568034 ZNF624Q9P2J8 865 aaPredicted RBP17.62■□□□□ 0.41
COMMD4-222ENST00000568034 ACSL5Q9ULC5 683 aa17.62■□□□□ 0.41
COMMD4-222ENST00000568034 CORO1CQ9ULV4 474 aaPredicted RBP17.62■□□□□ 0.41
COMMD4-222ENST00000568034 PSMD13Q9UNM6 376 aa17.62■□□□□ 0.41
COMMD4-222ENST00000568034 CFAP54Q96N23 3096 aa17.62■□□□□ 0.41
COMMD4-222ENST00000568034 A0A087WUV0 522 aaPredicted RBP17.61■□□□□ 0.41
COMMD4-222ENST00000568034 OR52A4PA6NMU1 304 aa17.61■□□□□ 0.41
COMMD4-222ENST00000568034 LDOC1O95751 146 aaPredicted RBP17.61■□□□□ 0.41
COMMD4-222ENST00000568034 CKMT1AP12532 417 aa17.61■□□□□ 0.41
COMMD4-222ENST00000568034 CHRM3P20309 590 aa17.61■□□□□ 0.41
COMMD4-222ENST00000568034 CSRP1P21291 193 aaKnown RBP17.61■□□□□ 0.41
COMMD4-222ENST00000568034 UBE2IP63279 158 aaKnown RBP17.61■□□□□ 0.41
COMMD4-222ENST00000568034 BRD3Q15059 726 aa17.61■□□□□ 0.41
COMMD4-222ENST00000568034 HECTD2Q5U5R9 776 aa17.61■□□□□ 0.41
COMMD4-222ENST00000568034 CAPRIN2Q6IMN6 1127 aaKnown RBP17.61■□□□□ 0.41
COMMD4-222ENST00000568034 EMBQ6PCB8 327 aa17.61■□□□□ 0.41
COMMD4-222ENST00000568034 ARL14Q8N4G2 192 aa17.61■□□□□ 0.41
COMMD4-222ENST00000568034 CD200R1Q8TD46 325 aa17.61■□□□□ 0.41
COMMD4-222ENST00000568034 CYTH2Q99418 400 aa17.61■□□□□ 0.41
COMMD4-222ENST00000568034 GPR21Q99679 349 aa17.61■□□□□ 0.41
COMMD4-222ENST00000568034 RBBP8Q99708 897 aa17.61■□□□□ 0.41
COMMD4-222ENST00000568034 CCDC68Q9H2F9 335 aa17.61■□□□□ 0.41
COMMD4-222ENST00000568034 FTSJ1Q9UET6 329 aa17.61■□□□□ 0.41
COMMD4-222ENST00000568034 CNOT1A5YKK6 2376 aaKnown RBP17.6■□□□□ 0.41
COMMD4-222ENST00000568034 TRBV23OR9-2A0A075B6M9 112 aa17.6■□□□□ 0.41
COMMD4-222ENST00000568034 KIR2DS5A0A0G2JLQ3 304 aa17.6■□□□□ 0.41
COMMD4-222ENST00000568034 A0A0G2JNG1 304 aa17.6■□□□□ 0.41
COMMD4-222ENST00000568034 KIR2DS3K7RE56 304 aa17.6■□□□□ 0.41
COMMD4-222ENST00000568034 SLCO2B1O94956 709 aa17.6■□□□□ 0.41
COMMD4-222ENST00000568034 CD9P21926 228 aa17.6■□□□□ 0.41
COMMD4-222ENST00000568034 FDXRP22570 491 aa17.6■□□□□ 0.41
COMMD4-222ENST00000568034 MCM3P25205 808 aa17.6■□□□□ 0.41
COMMD4-222ENST00000568034 ACADLP28330 430 aa17.6■□□□□ 0.41
COMMD4-222ENST00000568034 SLC19A1P41440 591 aa17.6■□□□□ 0.41
COMMD4-222ENST00000568034 PGGT1BP53609 377 aa17.6■□□□□ 0.41
COMMD4-222ENST00000568034 LIMK2P53671 638 aa17.6■□□□□ 0.41
COMMD4-222ENST00000568034 HSPA14Q0VDF9 509 aa17.6■□□□□ 0.41
COMMD4-222ENST00000568034 DNAJC3Q13217 504 aa17.6■□□□□ 0.41
COMMD4-222ENST00000568034 SLC29A2Q14542 456 aa17.6■□□□□ 0.41
COMMD4-222ENST00000568034 KIR2DS5Q14953 304 aa17.6■□□□□ 0.41
COMMD4-222ENST00000568034 NR0B2Q15466 257 aa17.6■□□□□ 0.41
COMMD4-222ENST00000568034 RPE65Q16518 533 aa17.6■□□□□ 0.41
COMMD4-222ENST00000568034 SYTL3Q4VX76 610 aa17.6■□□□□ 0.41
COMMD4-222ENST00000568034 PLEKHS1Q5SXH7 462 aa17.6■□□□□ 0.41
COMMD4-222ENST00000568034 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.6■□□□□ 0.41
COMMD4-222ENST00000568034 GUSBP11Q6P575 273 aa17.6■□□□□ 0.41
COMMD4-222ENST00000568034 OTOAQ7RTW8 1153 aa17.6■□□□□ 0.41
COMMD4-222ENST00000568034 GLRX5Q86SX6 157 aa17.6■□□□□ 0.41
COMMD4-222ENST00000568034 PIM3Q86V86 326 aa17.6■□□□□ 0.41
COMMD4-222ENST00000568034 SLC22A15Q8IZD6 547 aa17.6■□□□□ 0.41
COMMD4-222ENST00000568034 GPATCH11Q8N954 259 aa17.6■□□□□ 0.41
COMMD4-222ENST00000568034 SIDT2Q8NBJ9 832 aaKnown RBP17.6■□□□□ 0.41
COMMD4-222ENST00000568034 SLC44A1Q8WWI5 657 aa17.6■□□□□ 0.41
COMMD4-222ENST00000568034 GLMNQ92990 594 aa17.6■□□□□ 0.41
COMMD4-222ENST00000568034 CAVIN3Q969G5 261 aa17.6■□□□□ 0.41
COMMD4-222ENST00000568034 INSM2Q96T92 566 aaPredicted RBP17.6■□□□□ 0.41
COMMD4-222ENST00000568034 TOR4AQ9NXH8 423 aa17.6■□□□□ 0.41
COMMD4-222ENST00000568034 DLL3Q9NYJ7 618 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms