RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 RBMS1P29558 406 aaKnown RBP22.36■■□□□ 1.17
TDP1-216ENST00000556867 MAPK9P45984 424 aa22.36■■□□□ 1.17
TDP1-216ENST00000556867 PPM1FP49593 454 aaPredicted RBP22.36■■□□□ 1.17
TDP1-216ENST00000556867 RPA4Q13156 261 aa22.36■■□□□ 1.17
TDP1-216ENST00000556867 C16orf72Q14CZ0 275 aa22.36■■□□□ 1.17
TDP1-216ENST00000556867 KIAA0930Q6ICG6 404 aaPredicted RBP22.36■■□□□ 1.17
TDP1-216ENST00000556867 CAPRIN2Q6IMN6 1127 aaKnown RBP22.36■■□□□ 1.17
TDP1-216ENST00000556867 C12orf66Q96MD2 445 aa22.36■■□□□ 1.17
TDP1-216ENST00000556867 INSM2Q96T92 566 aaPredicted RBP22.36■■□□□ 1.17
TDP1-216ENST00000556867 CMKLR1Q99788 373 aa22.36■■□□□ 1.17
TDP1-216ENST00000556867 THSD1Q9NS62 852 aa22.36■■□□□ 1.17
TDP1-216ENST00000556867 IMP3Q9NV31 184 aaKnown RBP22.36■■□□□ 1.17
TDP1-216ENST00000556867 OGFRQ9NZT2 677 aa22.36■■□□□ 1.17
TDP1-216ENST00000556867 SAMD15Q9P1V8 674 aa22.36■■□□□ 1.17
TDP1-216ENST00000556867 MN1Q10571 1320 aaPredicted RBP22.35■■□□□ 1.17
TDP1-216ENST00000556867 F8W8V4 182 aa22.35■■□□□ 1.17
TDP1-216ENST00000556867 UBXN7O94888 489 aa22.35■■□□□ 1.17
TDP1-216ENST00000556867 POLBP06746 335 aa22.35■■□□□ 1.17
TDP1-216ENST00000556867 ITGA2BP08514 1039 aa22.35■■□□□ 1.17
TDP1-216ENST00000556867 OR56A5P0C7T3 313 aa22.35■■□□□ 1.17
TDP1-216ENST00000556867 CASQ1P31415 396 aa22.35■■□□□ 1.17
TDP1-216ENST00000556867 TTPAP49638 278 aa22.35■■□□□ 1.17
TDP1-216ENST00000556867 DR1Q01658 176 aa22.35■■□□□ 1.17
TDP1-216ENST00000556867 CASC4Q6P4E1 433 aa22.35■■□□□ 1.17
TDP1-216ENST00000556867 FOXR1Q6PIV2 292 aa22.35■■□□□ 1.17
TDP1-216ENST00000556867 CES3Q6UWW8 571 aa22.35■■□□□ 1.17
TDP1-216ENST00000556867 SPDYE1Q8NFV5 336 aaPredicted RBP22.35■■□□□ 1.17
TDP1-216ENST00000556867 NCSTNQ92542 709 aa22.35■■□□□ 1.17
TDP1-216ENST00000556867 FGF11Q92914 225 aa22.35■■□□□ 1.17
TDP1-216ENST00000556867 OR52A5Q9H2C5 316 aa22.35■■□□□ 1.17
TDP1-216ENST00000556867 AKAP7Q9P0M2 348 aaPredicted RBP22.35■■□□□ 1.17
TDP1-216ENST00000556867 CFAP20Q9Y6A4 193 aaKnown RBP22.35■■□□□ 1.17
TDP1-216ENST00000556867 CELSR3Q9NYQ7 3312 aa22.34■■□□□ 1.17
TDP1-216ENST00000556867 FAM237BA0A1B0GVD1 139 aa22.34■■□□□ 1.17
TDP1-216ENST00000556867 MAGEB16A2A368 324 aa22.34■■□□□ 1.17
TDP1-216ENST00000556867 CDRT15L2A8MXV6 281 aa22.34■■□□□ 1.17
TDP1-216ENST00000556867 TNFSF15O95150 251 aa22.34■■□□□ 1.17
TDP1-216ENST00000556867 VAPBO95292 243 aa22.34■■□□□ 1.17
TDP1-216ENST00000556867 IVDP26440 423 aa22.34■■□□□ 1.17
TDP1-216ENST00000556867 PCGF5Q86SE9 256 aa22.34■■□□□ 1.17
TDP1-216ENST00000556867 CLEC14AQ86T13 490 aa22.34■■□□□ 1.17
TDP1-216ENST00000556867 LDB1Q86U70 411 aaPredicted RBP22.34■■□□□ 1.17
TDP1-216ENST00000556867 HOOK3Q86VS8 718 aa22.34■■□□□ 1.17
TDP1-216ENST00000556867 JAMLQ86YT9 394 aa22.34■■□□□ 1.17
TDP1-216ENST00000556867 RCBTB1Q8NDN9 531 aa22.34■■□□□ 1.17
TDP1-216ENST00000556867 ZFPM2Q8WW38 1151 aa22.34■■□□□ 1.17
TDP1-216ENST00000556867 HEBP2Q9Y5Z4 205 aa22.34■■□□□ 1.17
TDP1-216ENST00000556867 LIN7AO14910 233 aaPredicted RBP22.33■■□□□ 1.17
TDP1-216ENST00000556867 JMJD7P0C870 316 aa22.33■■□□□ 1.17
TDP1-216ENST00000556867 HGFP14210 728 aa22.33■■□□□ 1.17
TDP1-216ENST00000556867 PAMP19021 973 aa22.33■■□□□ 1.17
TDP1-216ENST00000556867 MPSTP25325 297 aa22.33■■□□□ 1.17
TDP1-216ENST00000556867 CAPZBP47756 277 aa22.33■■□□□ 1.17
TDP1-216ENST00000556867 ARCN1P48444 511 aaKnown RBP22.33■■□□□ 1.17
TDP1-216ENST00000556867 CD151P48509 253 aa22.33■■□□□ 1.17
TDP1-216ENST00000556867 IZUMO3Q5VZ72 239 aa22.33■■□□□ 1.17
TDP1-216ENST00000556867 DUS1LQ6P1R4 473 aaKnown RBP22.33■■□□□ 1.17
TDP1-216ENST00000556867 ZNF449Q6P9G9 518 aa22.33■■□□□ 1.17
TDP1-216ENST00000556867 SYT10Q6XYQ8 523 aa22.33■■□□□ 1.17
TDP1-216ENST00000556867 TMEM135Q86UB9 458 aa22.33■■□□□ 1.17
TDP1-216ENST00000556867 PLXDC1Q8IUK5 500 aa22.33■■□□□ 1.17
TDP1-216ENST00000556867 AGGF1Q8N302 714 aaeCLIP22.33■■□□□ 1.17
TDP1-216ENST00000556867 PISDQ9UG56 409 aa22.33■■□□□ 1.17
TDP1-216ENST00000556867 PRMT5O14744 637 aaPredicted RBP22.32■■□□□ 1.16
TDP1-216ENST00000556867 C9P02748 559 aa22.32■■□□□ 1.16
TDP1-216ENST00000556867 TYRP1P17643 537 aa22.32■■□□□ 1.16
TDP1-216ENST00000556867 AMD1P17707 334 aa22.32■■□□□ 1.16
TDP1-216ENST00000556867 NDUFS1P28331 727 aa22.32■■□□□ 1.16
TDP1-216ENST00000556867 PDHA2P29803 388 aa22.32■■□□□ 1.16
TDP1-216ENST00000556867 PREPP48147 710 aa22.32■■□□□ 1.16
TDP1-216ENST00000556867 PCBP4P57723 403 aaKnown RBP22.32■■□□□ 1.16
TDP1-216ENST00000556867 DHX34Q14147 1143 aaKnown RBP22.32■■□□□ 1.16
TDP1-216ENST00000556867 TYSND1Q2T9J0 566 aa22.32■■□□□ 1.16
TDP1-216ENST00000556867 ANKRD20A4Q4UJ75 823 aa22.32■■□□□ 1.16
TDP1-216ENST00000556867 MRNIPQ6NTE8 343 aa22.32■■□□□ 1.16
TDP1-216ENST00000556867 ARHGAP22Q7Z5H3 698 aa22.32■■□□□ 1.16
TDP1-216ENST00000556867 AGBL5Q8NDL9 886 aa22.32■■□□□ 1.16
TDP1-216ENST00000556867 ELMO1Q92556 727 aa22.32■■□□□ 1.16
TDP1-216ENST00000556867 RSC1A1Q92681 617 aa22.32■■□□□ 1.16
TDP1-216ENST00000556867 ZNF669Q96BR6 464 aaPredicted RBP22.32■■□□□ 1.16
TDP1-216ENST00000556867 SIGLEC10Q96LC7 697 aa22.32■■□□□ 1.16
TDP1-216ENST00000556867 TRIM56Q9BRZ2 755 aaKnown RBP22.32■■□□□ 1.16
TDP1-216ENST00000556867 KIR3DX1Q9H7L2 352 aa22.32■■□□□ 1.16
TDP1-216ENST00000556867 PCDHGA7Q9Y5G6 932 aa22.32■■□□□ 1.16
TDP1-216ENST00000556867 COLEC10Q9Y6Z7 277 aa22.32■■□□□ 1.16
TDP1-216ENST00000556867 AHCTF1Q8WYP5 2266 aa22.32■■□□□ 1.16
TDP1-216ENST00000556867 A0A087WV48 116 aa22.31■■□□□ 1.16
TDP1-216ENST00000556867 IFRD1O00458 451 aaPredicted RBP22.31■■□□□ 1.16
TDP1-216ENST00000556867 TTI1O43156 1089 aa22.31■■□□□ 1.16
TDP1-216ENST00000556867 ITIH1P19827 911 aa22.31■■□□□ 1.16
TDP1-216ENST00000556867 EIF2S3P41091 472 aaKnown RBP22.31■■□□□ 1.16
TDP1-216ENST00000556867 PLOD1Q02809 727 aaPredicted RBP22.31■■□□□ 1.16
TDP1-216ENST00000556867 PDZD3Q86UT5 571 aa22.31■■□□□ 1.16
TDP1-216ENST00000556867 LRRC6Q86X45 466 aa22.31■■□□□ 1.16
TDP1-216ENST00000556867 OTUD6BQ8N6M0 293 aa22.31■■□□□ 1.16
TDP1-216ENST00000556867 FCRL3Q96P31 734 aaPredicted RBP22.31■■□□□ 1.16
TDP1-216ENST00000556867 CARD6Q9BX69 1037 aa22.31■■□□□ 1.16
TDP1-216ENST00000556867 TSSK1BQ9BXA7 367 aa22.31■■□□□ 1.16
TDP1-216ENST00000556867 RAB33BQ9H082 229 aa22.31■■□□□ 1.16
TDP1-216ENST00000556867 P2RY12Q9H244 342 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms