RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 A0A1W2PR77 199 aa2.88□□□□□ -1.95
SCFD1-218ENST00000556256 hCG_1807616A0A1W2PRN6 198 aa2.88□□□□□ -1.95
SCFD1-218ENST00000556256 VCYO14598 125 aa2.88□□□□□ -1.95
SCFD1-218ENST00000556256 JRKO75564 520 aa2.88□□□□□ -1.95
SCFD1-218ENST00000556256 EDN1P05305 212 aa2.88□□□□□ -1.95
SCFD1-218ENST00000556256 RB1P06400 928 aa2.88□□□□□ -1.95
SCFD1-218ENST00000556256 HOXC9P31274 260 aa2.88□□□□□ -1.95
SCFD1-218ENST00000556256 TAS2R40P59535 323 aa2.88□□□□□ -1.95
SCFD1-218ENST00000556256 MRPS34P82930 218 aaKnown RBP2.88□□□□□ -1.95
SCFD1-218ENST00000556256 WTAPQ15007 396 aa2.88□□□□□ -1.95
SCFD1-218ENST00000556256 FFAR4Q5NUL3 377 aa2.88□□□□□ -1.95
SCFD1-218ENST00000556256 LRIF1Q5T3J3 769 aa2.88□□□□□ -1.95
SCFD1-218ENST00000556256 ADAMTSL4-AS1Q5T5F5 129 aa2.88□□□□□ -1.95
SCFD1-218ENST00000556256 GGNBP1Q5YKI7 109 aa2.88□□□□□ -1.95
SCFD1-218ENST00000556256 DUS1LQ6P1R4 473 aaKnown RBP2.88□□□□□ -1.95
SCFD1-218ENST00000556256 BRAT1Q6PJG6 821 aa2.88□□□□□ -1.95
SCFD1-218ENST00000556256 HJURPQ8NCD3 748 aaPredicted RBP2.88□□□□□ -1.95
SCFD1-218ENST00000556256 ZNRF4Q8WWF5 429 aa2.88□□□□□ -1.95
SCFD1-218ENST00000556256 ELMOD3Q96FG2 381 aa2.88□□□□□ -1.95
SCFD1-218ENST00000556256 CCDC34Q96HJ3 373 aa2.88□□□□□ -1.95
SCFD1-218ENST00000556256 EGLN2Q96KS0 407 aa2.88□□□□□ -1.95
SCFD1-218ENST00000556256 QRFPRQ96P65 431 aa2.88□□□□□ -1.95
SCFD1-218ENST00000556256 SERINC2Q96SA4 455 aa2.88□□□□□ -1.95
SCFD1-218ENST00000556256 PKP2Q99959 881 aa2.88□□□□□ -1.95
SCFD1-218ENST00000556256 FTOQ9C0B1 505 aaKnown RBP eCLIP2.88□□□□□ -1.95
SCFD1-218ENST00000556256 RAD21L1Q9H4I0 556 aa2.88□□□□□ -1.95
SCFD1-218ENST00000556256 GPR108Q9NPR9 543 aa2.88□□□□□ -1.95
SCFD1-218ENST00000556256 MTMR10Q9NXD2 777 aa2.88□□□□□ -1.95
SCFD1-218ENST00000556256 WSB2Q9NYS7 404 aaPredicted RBP2.88□□□□□ -1.95
SCFD1-218ENST00000556256 CWC15Q9P013 229 aaKnown RBP2.88□□□□□ -1.95
SCFD1-218ENST00000556256 SUCLA2Q9P2R7 463 aaPredicted RBP2.88□□□□□ -1.95
SCFD1-218ENST00000556256 ZNF215Q9UL58 517 aaPredicted RBP2.88□□□□□ -1.95
SCFD1-218ENST00000556256 TTC7AQ9ULT0 858 aaPredicted RBP2.88□□□□□ -1.95
SCFD1-218ENST00000556256 CLIC4Q9Y696 253 aa2.88□□□□□ -1.95
SCFD1-218ENST00000556256 PASKQ96RG2 1323 aa2.88□□□□□ -1.95
SCFD1-218ENST00000556256 C1orf226A1L170 272 aa2.87□□□□□ -1.95
SCFD1-218ENST00000556256 CLIC2O15247 247 aa2.87□□□□□ -1.95
SCFD1-218ENST00000556256 PAPSS1O43252 624 aaPredicted RBP2.87□□□□□ -1.95
SCFD1-218ENST00000556256 TSPAN9O75954 239 aa2.87□□□□□ -1.95
SCFD1-218ENST00000556256 SRPRAP08240 638 aaKnown RBP2.87□□□□□ -1.95
SCFD1-218ENST00000556256 TYMPP19971 482 aa2.87□□□□□ -1.95
SCFD1-218ENST00000556256 RAD52P43351 418 aa2.87□□□□□ -1.95
SCFD1-218ENST00000556256 FASLGP48023 281 aa2.87□□□□□ -1.95
SCFD1-218ENST00000556256 CAMPP49913 170 aa2.87□□□□□ -1.95
SCFD1-218ENST00000556256 TFAP4Q01664 338 aa2.87□□□□□ -1.95
SCFD1-218ENST00000556256 CHAF1BQ13112 559 aa2.87□□□□□ -1.95
SCFD1-218ENST00000556256 PEX6Q13608 980 aa2.87□□□□□ -1.95
SCFD1-218ENST00000556256 TOMM20Q15388 145 aa2.87□□□□□ -1.95
SCFD1-218ENST00000556256 KRTCAP3Q53RY4 240 aa2.87□□□□□ -1.95
SCFD1-218ENST00000556256 RARS2Q5T160 578 aaKnown RBP2.87□□□□□ -1.95
SCFD1-218ENST00000556256 FRG2Q64ET8 278 aa2.87□□□□□ -1.95
SCFD1-218ENST00000556256 ACSM2BQ68CK6 577 aa2.87□□□□□ -1.95
SCFD1-218ENST00000556256 LCN10Q6JVE6 187 aa2.87□□□□□ -1.95
SCFD1-218ENST00000556256 BHLHB9Q6PI77 547 aa2.87□□□□□ -1.95
SCFD1-218ENST00000556256 CACNA2D4Q7Z3S7 1137 aa2.87□□□□□ -1.95
SCFD1-218ENST00000556256 NRROSQ86YC3 692 aa2.87□□□□□ -1.95
SCFD1-218ENST00000556256 PCDH20Q8N6Y1 951 aaKnown RBP2.87□□□□□ -1.95
SCFD1-218ENST00000556256 ZNF614Q8N883 585 aa2.87□□□□□ -1.95
SCFD1-218ENST00000556256 HMGCLL1Q8TB92 370 aa2.87□□□□□ -1.95
SCFD1-218ENST00000556256 ZKSCAN4Q969J2 545 aaPredicted RBP2.87□□□□□ -1.95
SCFD1-218ENST00000556256 GMPPAQ96IJ6 420 aaPredicted RBP2.87□□□□□ -1.95
SCFD1-218ENST00000556256 HARBI1Q96MB7 349 aa2.87□□□□□ -1.95
SCFD1-218ENST00000556256 AGAP3Q96P47 875 aa2.87□□□□□ -1.95
SCFD1-218ENST00000556256 SRSF8Q9BRL6 282 aaKnown RBP2.87□□□□□ -1.95
SCFD1-218ENST00000556256 PCGF1Q9BSM1 259 aa2.87□□□□□ -1.95
SCFD1-218ENST00000556256 NDST4Q9H3R1 872 aa2.87□□□□□ -1.95
SCFD1-218ENST00000556256 PLK3Q9H4B4 646 aa2.87□□□□□ -1.95
SCFD1-218ENST00000556256 MAGIXQ9H6Y5 334 aa2.87□□□□□ -1.95
SCFD1-218ENST00000556256 SLC28A3Q9HAS3 691 aa2.87□□□□□ -1.95
SCFD1-218ENST00000556256 CLIC5Q9NZA1 410 aa2.87□□□□□ -1.95
SCFD1-218ENST00000556256 KLHL8Q9P2G9 620 aaPredicted RBP2.87□□□□□ -1.95
SCFD1-218ENST00000556256 UBA2Q9UBT2 640 aaPredicted RBP2.87□□□□□ -1.95
SCFD1-218ENST00000556256 FBXW11Q9UKB1 542 aa2.87□□□□□ -1.95
SCFD1-218ENST00000556256 JRKLQ9Y4A0 524 aa2.87□□□□□ -1.95
SCFD1-218ENST00000556256 A0A1W2PQ09 198 aa2.86□□□□□ -1.95
SCFD1-218ENST00000556256 ATP2A1O14983 1001 aa2.86□□□□□ -1.95
SCFD1-218ENST00000556256 EIF3DO15371 548 aaKnown RBP eCLIP2.86□□□□□ -1.95
SCFD1-218ENST00000556256 PI15O43692 258 aa2.86□□□□□ -1.95
SCFD1-218ENST00000556256 HS6ST1O60243 411 aa2.86□□□□□ -1.95
SCFD1-218ENST00000556256 ENTPD3O75355 529 aa2.86□□□□□ -1.95
SCFD1-218ENST00000556256 CLTBP09497 229 aa2.86□□□□□ -1.95
SCFD1-218ENST00000556256 NR2F1P10589 423 aa2.86□□□□□ -1.95
SCFD1-218ENST00000556256 ACTN1P12814 892 aa2.86□□□□□ -1.95
SCFD1-218ENST00000556256 TMEM11P17152 192 aa2.86□□□□□ -1.95
SCFD1-218ENST00000556256 UBA1P22314 1058 aaKnown RBP2.86□□□□□ -1.95
SCFD1-218ENST00000556256 PON1P27169 355 aa2.86□□□□□ -1.95
SCFD1-218ENST00000556256 CDC25CP30307 473 aa2.86□□□□□ -1.95
SCFD1-218ENST00000556256 ACTN2P35609 894 aa2.86□□□□□ -1.95
SCFD1-218ENST00000556256 AHRP35869 848 aa2.86□□□□□ -1.95
SCFD1-218ENST00000556256 PIK3CAP42336 1068 aa2.86□□□□□ -1.95
SCFD1-218ENST00000556256 GALCP54803 685 aa2.86□□□□□ -1.95
SCFD1-218ENST00000556256 PSMC6P62333 389 aa2.86□□□□□ -1.95
SCFD1-218ENST00000556256 KCTD2Q14681 263 aa2.86□□□□□ -1.95
SCFD1-218ENST00000556256 PCLAFQ15004 111 aa2.86□□□□□ -1.95
SCFD1-218ENST00000556256 NAB2Q15742 525 aa2.86□□□□□ -1.95
SCFD1-218ENST00000556256 ZNF805Q5CZA5 627 aa2.86□□□□□ -1.95
SCFD1-218ENST00000556256 RILPL1Q5EBL4 403 aa2.86□□□□□ -1.95
SCFD1-218ENST00000556256 ZDHHC20Q5W0Z9 365 aa2.86□□□□□ -1.95
SCFD1-218ENST00000556256 SIGIRRQ6IA17 410 aa2.86□□□□□ -1.95
SCFD1-218ENST00000556256 ZNF280DQ6N043 979 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms