RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 TMEM189-UBE2V1I3L0A0 370 aa3.57□□□□□ -1.84
SCFD1-210ENST00000553693 PLK4O00444 970 aa3.57□□□□□ -1.84
SCFD1-210ENST00000553693 RTN3O95197 1032 aaPredicted RBP3.57□□□□□ -1.84
SCFD1-210ENST00000553693 EIF2S1P05198 315 aaKnown RBP3.57□□□□□ -1.84
SCFD1-210ENST00000553693 H1F0P07305 194 aaKnown RBP3.57□□□□□ -1.84
SCFD1-210ENST00000553693 DPEP1P16444 411 aa3.57□□□□□ -1.84
SCFD1-210ENST00000553693 CKMT2P17540 419 aa3.57□□□□□ -1.84
SCFD1-210ENST00000553693 ACADLP28330 430 aa3.57□□□□□ -1.84
SCFD1-210ENST00000553693 BMXP51813 675 aa3.57□□□□□ -1.84
SCFD1-210ENST00000553693 RPS18P62269 152 aaKnown RBP3.57□□□□□ -1.84
SCFD1-210ENST00000553693 UBE2V1Q13404 147 aa3.57□□□□□ -1.84
SCFD1-210ENST00000553693 ZSCAN23Q3MJ62 389 aa3.57□□□□□ -1.84
SCFD1-210ENST00000553693 ARHGEF16Q5VV41 709 aa3.57□□□□□ -1.84
SCFD1-210ENST00000553693 METTL7BQ6UX53 244 aa3.57□□□□□ -1.84
SCFD1-210ENST00000553693 L3MBTL4Q8NA19 623 aa3.57□□□□□ -1.84
SCFD1-210ENST00000553693 RFFLQ8WZ73 363 aa3.57□□□□□ -1.84
SCFD1-210ENST00000553693 POMGNT1Q8WZA1 660 aa3.57□□□□□ -1.84
SCFD1-210ENST00000553693 TMEM143Q96AN5 459 aa3.57□□□□□ -1.84
SCFD1-210ENST00000553693 PERPQ96FX8 193 aa3.57□□□□□ -1.84
SCFD1-210ENST00000553693 GMPPAQ96IJ6 420 aaPredicted RBP3.57□□□□□ -1.84
SCFD1-210ENST00000553693 POM121L2Q96KW2 1035 aa3.57□□□□□ -1.84
SCFD1-210ENST00000553693 WDFY2Q96P53 400 aa3.57□□□□□ -1.84
SCFD1-210ENST00000553693 GFI1Q99684 422 aa3.57□□□□□ -1.84
SCFD1-210ENST00000553693 SEMA6AQ9H2E6 1030 aa3.57□□□□□ -1.84
SCFD1-210ENST00000553693 DENND2DQ9H6A0 471 aaPredicted RBP3.57□□□□□ -1.84
SCFD1-210ENST00000553693 OLFML3Q9NRN5 406 aa3.57□□□□□ -1.84
SCFD1-210ENST00000553693 DISP3Q9P2K9 1392 aa3.57□□□□□ -1.84
SCFD1-210ENST00000553693 DNAJB4Q9UDY4 337 aa3.57□□□□□ -1.84
SCFD1-210ENST00000553693 GLI2P10070 1586 aa3.56□□□□□ -1.84
SCFD1-210ENST00000553693 ERICH3Q5RHP9 1530 aa3.56□□□□□ -1.84
SCFD1-210ENST00000553693 RUSC2Q8N2Y8 1516 aa3.56□□□□□ -1.84
SCFD1-210ENST00000553693 PTPRGP23470 1445 aa3.56□□□□□ -1.84
SCFD1-210ENST00000553693 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.56□□□□□ -1.84
SCFD1-210ENST00000553693 TEX13DA0A0J9YY54 714 aaPredicted RBP3.56□□□□□ -1.84
SCFD1-210ENST00000553693 KRTAP16-1A8MUX0 517 aa3.56□□□□□ -1.84
SCFD1-210ENST00000553693 J3QR06 171 aa3.56□□□□□ -1.84
SCFD1-210ENST00000553693 DCXO43602 365 aa3.56□□□□□ -1.84
SCFD1-210ENST00000553693 CRLF1O75462 422 aa3.56□□□□□ -1.84
SCFD1-210ENST00000553693 NADKO95544 446 aaPredicted RBP3.56□□□□□ -1.84
SCFD1-210ENST00000553693 HMBSP08397 361 aa3.56□□□□□ -1.84
SCFD1-210ENST00000553693 TYMPP19971 482 aa3.56□□□□□ -1.84
SCFD1-210ENST00000553693 THOP1P52888 689 aa3.56□□□□□ -1.84
SCFD1-210ENST00000553693 KRTAP10-3P60369 221 aa3.56□□□□□ -1.84
SCFD1-210ENST00000553693 EIF4A2Q14240 407 aaKnown RBP3.56□□□□□ -1.84
SCFD1-210ENST00000553693 LCE3CQ5T5A8 94 aa3.56□□□□□ -1.84
SCFD1-210ENST00000553693 FAM109BQ6ICB4 259 aaPredicted RBP3.56□□□□□ -1.84
SCFD1-210ENST00000553693 KLC3Q6P597 504 aa3.56□□□□□ -1.84
SCFD1-210ENST00000553693 SARM1Q6SZW1 724 aa3.56□□□□□ -1.84
SCFD1-210ENST00000553693 GALNT13Q8IUC8 556 aa3.56□□□□□ -1.84
SCFD1-210ENST00000553693 MRGPRDQ8TDS7 321 aa3.56□□□□□ -1.84
SCFD1-210ENST00000553693 SEMA4DQ92854 862 aa3.56□□□□□ -1.84
SCFD1-210ENST00000553693 ZKSCAN4Q969J2 545 aaPredicted RBP3.56□□□□□ -1.84
SCFD1-210ENST00000553693 GIMAP5Q96F15 307 aa3.56□□□□□ -1.84
SCFD1-210ENST00000553693 NAP1L4Q99733 375 aaKnown RBP3.56□□□□□ -1.84
SCFD1-210ENST00000553693 RTP3Q9BQQ7 232 aa3.56□□□□□ -1.84
SCFD1-210ENST00000553693 ATAD3AQ9NVI7 634 aa3.56□□□□□ -1.84
SCFD1-210ENST00000553693 MIOSQ9NXC5 875 aa3.56□□□□□ -1.84
SCFD1-210ENST00000553693 SLC7A7Q9UM01 511 aa3.56□□□□□ -1.84
SCFD1-210ENST00000553693 TP53BP1Q12888 1972 aaPredicted RBP3.56□□□□□ -1.84
SCFD1-210ENST00000553693 PLB1Q6P1J6 1458 aa3.55□□□□□ -1.84
SCFD1-210ENST00000553693 LIPT2A6NK58 231 aa3.55□□□□□ -1.84
SCFD1-210ENST00000553693 OR6C76A6NM76 312 aa3.55□□□□□ -1.84
SCFD1-210ENST00000553693 PRR32B1ATL7 298 aa3.55□□□□□ -1.84
SCFD1-210ENST00000553693 H7C423 109 aa3.55□□□□□ -1.84
SCFD1-210ENST00000553693 EDN1P05305 212 aa3.55□□□□□ -1.84
SCFD1-210ENST00000553693 ATP1A3P13637 1013 aa3.55□□□□□ -1.84
SCFD1-210ENST00000553693 SELLP14151 372 aa3.55□□□□□ -1.84
SCFD1-210ENST00000553693 NFKBIAP25963 317 aa3.55□□□□□ -1.84
SCFD1-210ENST00000553693 KRT9P35527 623 aa3.55□□□□□ -1.84
SCFD1-210ENST00000553693 WNT5AP41221 380 aa3.55□□□□□ -1.84
SCFD1-210ENST00000553693 LMO4P61968 165 aa3.55□□□□□ -1.84
SCFD1-210ENST00000553693 SNRPD1P62314 119 aaKnown RBP3.55□□□□□ -1.84
SCFD1-210ENST00000553693 TSTQ16762 297 aaKnown RBP3.55□□□□□ -1.84
SCFD1-210ENST00000553693 ADAMTSL4-AS1Q5T5F5 129 aa3.55□□□□□ -1.84
SCFD1-210ENST00000553693 INTS11Q5TA45 600 aaKnown RBP3.55□□□□□ -1.84
SCFD1-210ENST00000553693 TRIM65Q6PJ69 517 aa3.55□□□□□ -1.84
SCFD1-210ENST00000553693 DENND5BQ6ZUT9 1274 aa3.55□□□□□ -1.84
SCFD1-210ENST00000553693 CEP97Q8IW35 865 aa3.55□□□□□ -1.84
SCFD1-210ENST00000553693 ZNF440Q8IYI8 595 aa3.55□□□□□ -1.84
SCFD1-210ENST00000553693 ZNF611Q8N823 705 aa3.55□□□□□ -1.84
SCFD1-210ENST00000553693 PCYOX1LQ8NBM8 494 aa3.55□□□□□ -1.84
SCFD1-210ENST00000553693 IL17REQ8NFR9 667 aa3.55□□□□□ -1.84
SCFD1-210ENST00000553693 ZNF71Q9NQZ8 489 aaPredicted RBP3.55□□□□□ -1.84
SCFD1-210ENST00000553693 DIAPH3Q9NSV4 1193 aa3.55□□□□□ -1.84
SCFD1-210ENST00000553693 KLHL8Q9P2G9 620 aaPredicted RBP3.55□□□□□ -1.84
SCFD1-210ENST00000553693 EXOGQ9Y2C4 368 aaKnown RBP3.55□□□□□ -1.84
SCFD1-210ENST00000553693 TOP2BQ02880 1626 aa3.55□□□□□ -1.84
SCFD1-210ENST00000553693 EPRSP07814 1512 aaKnown RBP3.54□□□□□ -1.84
SCFD1-210ENST00000553693 ARHGEF40Q8TER5 1519 aa3.54□□□□□ -1.84
SCFD1-210ENST00000553693 ABCC2Q92887 1545 aa3.54□□□□□ -1.84
SCFD1-210ENST00000553693 KIAA0586Q9BVV6 1533 aa3.54□□□□□ -1.84
SCFD1-210ENST00000553693 IGHV4-4A0A075B6R2 117 aa3.54□□□□□ -1.84
SCFD1-210ENST00000553693 IGHV4-61A0A0C4DH41 118 aa3.54□□□□□ -1.84
SCFD1-210ENST00000553693 SH3BP5O60239 455 aa3.54□□□□□ -1.84
SCFD1-210ENST00000553693 TRMUO75648 421 aaKnown RBP3.54□□□□□ -1.84
SCFD1-210ENST00000553693 GCNT3O95395 438 aa3.54□□□□□ -1.84
SCFD1-210ENST00000553693 DDX58O95786 925 aaKnown RBP3.54□□□□□ -1.84
SCFD1-210ENST00000553693 AGR2O95994 175 aa3.54□□□□□ -1.84
SCFD1-210ENST00000553693 IGHV4-59P01825 116 aa3.54□□□□□ -1.84
SCFD1-210ENST00000553693 SRPRAP08240 638 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms