RNA–Protein interactions for RNA: ENST00000553513.1

PCNX4-206, Transcript of pecanex 4, humanhuman

TSL 4

Gene PCNX4, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-206ENST00000553513 PSMD14O00487 310 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 CLDN4O14493 209 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 ANKRD28O15084 1053 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 BUD23O43709 281 aaKnown RBP3.78□□□□□ -1.8
PCNX4-206ENST00000553513 ZNF217O75362 1048 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 OR52Z1P0C646 297 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 THEGLP0DJG4 465 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 CASTP20810 708 aaKnown RBP3.78□□□□□ -1.8
PCNX4-206ENST00000553513 HRH2P25021 359 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 PSMA3P25788 255 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 ITGB8P26012 769 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 HOXD3P31249 432 aaPredicted RBP3.78□□□□□ -1.8
PCNX4-206ENST00000553513 HOXA11P31270 313 aaPredicted RBP3.78□□□□□ -1.8
PCNX4-206ENST00000553513 HNRNPH2P55795 449 aaKnown RBP3.78□□□□□ -1.8
PCNX4-206ENST00000553513 SEC61BP60468 96 aaKnown RBP3.78□□□□□ -1.8
PCNX4-206ENST00000553513 LTBQ06643 244 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 DDR1Q08345 913 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 ACSM1Q08AH1 577 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 GAGE2BQ13066 116 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 PPIGQ13427 754 aaKnown RBP eCLIP3.78□□□□□ -1.8
PCNX4-206ENST00000553513 RCN2Q14257 317 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 MELKQ14680 651 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 MORF4L2Q15014 288 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 DECR1Q16698 335 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 TWISTNBQ3B726 338 aaPredicted RBP3.78□□□□□ -1.8
PCNX4-206ENST00000553513 C2orf76Q3KRA6 126 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 AMZ1Q400G9 498 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 GAGE2EQ4V326 116 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 ATP13A5Q4VNC0 1218 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 MPP7Q5T2T1 576 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 SHEQ5VZ18 495 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 GAGE2AQ6NT46 116 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 ZNF449Q6P9G9 518 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 Q6ZSV7 163 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 ADIPOR2Q86V24 386 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 ZSCAN30Q86W11 494 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 SPATA2LQ8IUW3 424 aaPredicted RBP3.78□□□□□ -1.8
PCNX4-206ENST00000553513 TUSC5Q8IXB3 177 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 TIGD4Q8IY51 512 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 MAML2Q8IZL2 1156 aaPredicted RBP3.78□□□□□ -1.8
PCNX4-206ENST00000553513 BEST3Q8N1M1 668 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 GCSAMQ8N6F7 178 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 PPFIBP2Q8ND30 876 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 PAPD5Q8NDF8 572 aaKnown RBP3.78□□□□□ -1.8
PCNX4-206ENST00000553513 THAP6Q8TBB0 222 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 ELP5Q8TE02 316 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 NEUROG1Q92886 237 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 SPSB1Q96BD6 273 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 SPDL1Q96EA4 605 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 MED30Q96HR3 178 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 PRMT6Q96LA8 375 aaPredicted RBP3.78□□□□□ -1.8
PCNX4-206ENST00000553513 OR6C1Q96RD1 312 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 CMKLR1Q99788 373 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 UTP14AQ9BVJ6 771 aaKnown RBP3.78□□□□□ -1.8
PCNX4-206ENST00000553513 FUT8Q9BYC5 575 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 MMP25Q9NPA2 562 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 DNAJB9Q9UBS3 223 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 GAGE2DQ9UEU5 116 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 MOSPD1Q9UJG1 213 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 SNX9Q9Y5X1 595 aa3.78□□□□□ -1.8
PCNX4-206ENST00000553513 IGHV4-28A0A0C4DH34 117 aa3.77□□□□□ -1.81
PCNX4-206ENST00000553513 EME2A4GXA9 379 aaPredicted RBP3.77□□□□□ -1.81
PCNX4-206ENST00000553513 BECN2A8MW95 431 aa3.77□□□□□ -1.81
PCNX4-206ENST00000553513 CCDC188H7C350 402 aa3.77□□□□□ -1.81
PCNX4-206ENST00000553513 SOCS6O14544 535 aa3.77□□□□□ -1.81
PCNX4-206ENST00000553513 IFIT3O14879 490 aaKnown RBP3.77□□□□□ -1.81
PCNX4-206ENST00000553513 RGS14O43566 566 aa3.77□□□□□ -1.81
PCNX4-206ENST00000553513 SPRY1O43609 319 aaPredicted RBP3.77□□□□□ -1.81
PCNX4-206ENST00000553513 CRCPO75575 148 aa3.77□□□□□ -1.81
PCNX4-206ENST00000553513 GBAP04062 536 aa3.77□□□□□ -1.81
PCNX4-206ENST00000553513 SUPT20HL2P0C7V6 817 aa3.77□□□□□ -1.81
PCNX4-206ENST00000553513 HLA-DPA1P20036 260 aa3.77□□□□□ -1.81
PCNX4-206ENST00000553513 KCNA5P22460 613 aa3.77□□□□□ -1.81
PCNX4-206ENST00000553513 CDC25CP30307 473 aa3.77□□□□□ -1.81
PCNX4-206ENST00000553513 GNL1P36915 607 aaPredicted RBP3.77□□□□□ -1.81
PCNX4-206ENST00000553513 DSC1Q08554 894 aa3.77□□□□□ -1.81
PCNX4-206ENST00000553513 SPOCK1Q08629 439 aa3.77□□□□□ -1.81
PCNX4-206ENST00000553513 COASYQ13057 564 aa3.77□□□□□ -1.81
PCNX4-206ENST00000553513 GPS2Q13227 327 aa3.77□□□□□ -1.81
PCNX4-206ENST00000553513 SYT16Q17RD7 645 aa3.77□□□□□ -1.81
PCNX4-206ENST00000553513 VWC2Q2TAL6 325 aa3.77□□□□□ -1.81
PCNX4-206ENST00000553513 TMEM35AQ53FP2 167 aa3.77□□□□□ -1.81
PCNX4-206ENST00000553513 ASPRV1Q53RT3 343 aa3.77□□□□□ -1.81
PCNX4-206ENST00000553513 C18orf63Q68DL7 685 aa3.77□□□□□ -1.81
PCNX4-206ENST00000553513 FAM122CQ6P4D5 195 aa3.77□□□□□ -1.81
PCNX4-206ENST00000553513 FIGLAQ6QHK4 219 aa3.77□□□□□ -1.81
PCNX4-206ENST00000553513 ENPP7Q6UWV6 458 aa3.77□□□□□ -1.81
PCNX4-206ENST00000553513 CCNI2Q6ZMN8 369 aaPredicted RBP3.77□□□□□ -1.81
PCNX4-206ENST00000553513 OTOAQ7RTW8 1153 aa3.77□□□□□ -1.81
PCNX4-206ENST00000553513 PIWIL3Q7Z3Z3 882 aaKnown RBP3.77□□□□□ -1.81
PCNX4-206ENST00000553513 TLK2Q86UE8 772 aa3.77□□□□□ -1.81
PCNX4-206ENST00000553513 MAP7D3Q8IWC1 876 aa3.77□□□□□ -1.81
PCNX4-206ENST00000553513 SYCP3Q8IZU3 236 aa3.77□□□□□ -1.81
PCNX4-206ENST00000553513 CARNMT1Q8N4J0 409 aa3.77□□□□□ -1.81
PCNX4-206ENST00000553513 C1orf52Q8N6N3 182 aaKnown RBP3.77□□□□□ -1.81
PCNX4-206ENST00000553513 PRR26Q8N8Z3 221 aa3.77□□□□□ -1.81
PCNX4-206ENST00000553513 ATAD1Q8NBU5 361 aa3.77□□□□□ -1.81
PCNX4-206ENST00000553513 SMRP1Q8NCR6 262 aa3.77□□□□□ -1.81
PCNX4-206ENST00000553513 MOSPD2Q8NHP6 518 aa3.77□□□□□ -1.81
PCNX4-206ENST00000553513 TAS1R2Q8TE23 839 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms