RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 SFRP1Q8N474 314 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 TEX9Q8N6V9 391 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 UXS1Q8NBZ7 420 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 ACVR1CQ8NER5 493 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 LILRB1Q8NHL6 650 aaPredicted RBP3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 HMGCLL1Q8TB92 370 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 ZFAND2BQ8WV99 257 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 NSMAFQ92636 917 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 BCL2L2Q92843 193 aaPredicted RBP3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 SLC25A28Q96A46 364 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 COQ8BQ96D53 544 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 TBC1D31Q96DN5 1066 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 OTUB1Q96FW1 271 aaPredicted RBP3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 HES6Q96HZ4 224 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 URB1-AS1Q96HZ7 61 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 SEPHS2Q99611 448 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 QTRT1Q9BXR0 403 aaKnown RBP3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 SEZ6LQ9BYH1 1024 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 SEMA4CQ9C0C4 833 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 DPAGT1Q9H3H5 408 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 THAP9Q9H5L6 903 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 SLA2Q9H6Q3 261 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 TBC1D17Q9HA65 648 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 FZD3Q9NPG1 666 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 IARS2Q9NSE4 1012 aaKnown RBP3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 DNAJC17Q9NVM6 304 aaKnown RBP3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 CYP39A1Q9NYL5 469 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 EPS15L1Q9UBC2 864 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 MOSPD1Q9UJG1 213 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 FBXL2Q9UKC9 423 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 APPL1Q9UKG1 709 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 ODF2LQ9ULJ1 636 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 RNF150Q9ULK6 438 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 ABT1Q9ULW3 272 aaKnown RBP3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 PRAG1Q86YV5 1406 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 GOLGA6L9A6NEM1 432 aa3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 YDJCA8MPS7 323 aa3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 KCNU1A8MYU2 1149 aa3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 MATN3O15232 486 aa3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 SLC16A5O15375 505 aa3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 ST8SIA3O43173 380 aa3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 RAMP2O60895 175 aa3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 SEC22BO75396 215 aa3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 WISP2O76076 250 aa3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 SLC16A8O95907 504 aa3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 LCATP04180 440 aa3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 CSN3P07498 182 aa3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 PLA2G4BP0C869 781 aa3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 NAGAP17050 411 aa3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 AZGP1P25311 298 aaKnown RBP3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 MPGP29372 298 aa3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 WNT5AP41221 380 aa3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 CTSCP53634 463 aa3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 UBASH3AP57075 661 aa3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 SEC61BP60468 96 aaKnown RBP3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 ST8SIA6P61647 398 aa3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 NPRL3Q12980 569 aa3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 TNK1Q13470 666 aa3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 SLC39A14Q15043 492 aa3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 ZNF789Q5FWF6 425 aa3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 CCDC158Q5M9N0 1113 aa3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 C10orf25Q5T742 122 aa3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 FAM69BQ5VUD6 431 aa3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 TXNRD3NBQ6F5E7 133 aa3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 ZNF517Q6ZMY9 492 aaPredicted RBP3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 PTF1AQ7RTS3 328 aa3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 DGLUCYQ7Z3D6 616 aa3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 RABEPKQ7Z6M1 372 aa3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 MRGPRGQ86SM5 289 aa3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 ANKRD13BQ86YJ7 626 aa3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 Q8N1X5 172 aa3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 SLC5A8Q8N695 610 aa3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 RTL3Q8N8U3 475 aaKnown RBP3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 OR5R1Q8NH85 324 aa3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 THAP6Q8TBB0 222 aa3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 UTP15Q8TED0 518 aaKnown RBP3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 CENPTQ96BT3 561 aa3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 SNRNP40Q96DI7 357 aaKnown RBP3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 SPATA33Q96N06 139 aa3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 PRSS22Q9GZN4 317 aa3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 SLC5A7Q9GZV3 580 aa3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 ISCUQ9H1K1 167 aa3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 FN3KQ9H479 309 aa3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 HHATLQ9HCP6 504 aa3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 AKAP7Q9P0M2 348 aaPredicted RBP3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 IL36RNQ9UBH0 155 aa3.93□□□□□ -1.78
LSM6P2-201ENST00000552208 HEG1Q9ULI3 1381 aa3.92□□□□□ -1.78
LSM6P2-201ENST00000552208 IGHV4-28A0A0C4DH34 117 aa3.92□□□□□ -1.78
LSM6P2-201ENST00000552208 TMEM272A0A1B0GTI8 110 aa3.92□□□□□ -1.78
LSM6P2-201ENST00000552208 SDR42E2A6NKP2 422 aa3.92□□□□□ -1.78
LSM6P2-201ENST00000552208 DVL1O14640 695 aa3.92□□□□□ -1.78
LSM6P2-201ENST00000552208 ADAM10O14672 748 aa3.92□□□□□ -1.78
LSM6P2-201ENST00000552208 CAPN9O14815 690 aa3.92□□□□□ -1.78
LSM6P2-201ENST00000552208 PGRMC2O15173 223 aa3.92□□□□□ -1.78
LSM6P2-201ENST00000552208 EIF3DO15371 548 aaKnown RBP eCLIP3.92□□□□□ -1.78
LSM6P2-201ENST00000552208 AP5Z1O43299 807 aa3.92□□□□□ -1.78
LSM6P2-201ENST00000552208 ITM2AO43736 263 aa3.92□□□□□ -1.78
LSM6P2-201ENST00000552208 VEGFDO43915 354 aa3.92□□□□□ -1.78
LSM6P2-201ENST00000552208 NME6O75414 186 aaPredicted RBP3.92□□□□□ -1.78
LSM6P2-201ENST00000552208 NDUFB8O95169 186 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms