RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.41□□□□□ -0.74
PTCH1-225ENST00000551845 HM13Q8TCT9 377 aa10.41□□□□□ -0.74
PTCH1-225ENST00000551845 SLC39A7Q92504 469 aa10.41□□□□□ -0.74
PTCH1-225ENST00000551845 GRAMD1AQ96CP6 724 aa10.41□□□□□ -0.74
PTCH1-225ENST00000551845 CXorf40BQ96DE9 158 aa10.41□□□□□ -0.74
PTCH1-225ENST00000551845 AHCYL2Q96HN2 611 aaKnown RBP10.41□□□□□ -0.74
PTCH1-225ENST00000551845 DEPDC7Q96QD5 511 aa10.41□□□□□ -0.74
PTCH1-225ENST00000551845 PANX3Q96QZ0 392 aa10.41□□□□□ -0.74
PTCH1-225ENST00000551845 GFM1Q96RP9 751 aaKnown RBP10.41□□□□□ -0.74
PTCH1-225ENST00000551845 LRRC1Q9BTT6 524 aa10.41□□□□□ -0.74
PTCH1-225ENST00000551845 CARD6Q9BX69 1037 aa10.41□□□□□ -0.74
PTCH1-225ENST00000551845 SYNDIG1Q9H7V2 258 aa10.41□□□□□ -0.74
PTCH1-225ENST00000551845 EPB41L5Q9HCM4 733 aa10.41□□□□□ -0.74
PTCH1-225ENST00000551845 KCNK4Q9NYG8 393 aa10.41□□□□□ -0.74
PTCH1-225ENST00000551845 SCHIP1Q9P0W5 487 aaPredicted RBP10.41□□□□□ -0.74
PTCH1-225ENST00000551845 MARCH4Q9P2E8 410 aaPredicted RBP10.41□□□□□ -0.74
PTCH1-225ENST00000551845 ZNF624Q9P2J8 865 aaPredicted RBP10.41□□□□□ -0.74
PTCH1-225ENST00000551845 FAM8A1Q9UBU6 413 aa10.41□□□□□ -0.74
PTCH1-225ENST00000551845 RABGEF1Q9UJ41 708 aa10.41□□□□□ -0.74
PTCH1-225ENST00000551845 PSMD13Q9UNM6 376 aa10.41□□□□□ -0.74
PTCH1-225ENST00000551845 VPS9D1Q9Y2B5 631 aa10.41□□□□□ -0.74
PTCH1-225ENST00000551845 WDR37Q9Y2I8 494 aa10.41□□□□□ -0.74
PTCH1-225ENST00000551845 PRSS21Q9Y6M0 314 aa10.41□□□□□ -0.74
PTCH1-225ENST00000551845 COLEC10Q9Y6Z7 277 aa10.41□□□□□ -0.74
PTCH1-225ENST00000551845 LRRK1Q38SD2 2015 aa10.4□□□□□ -0.74
PTCH1-225ENST00000551845 PTPRBP23467 1997 aa10.4□□□□□ -0.74
PTCH1-225ENST00000551845 A0A1W2PQM1 296 aa10.4□□□□□ -0.74
PTCH1-225ENST00000551845 FAM149AA5PLN7 773 aa10.4□□□□□ -0.74
PTCH1-225ENST00000551845 IFRD1O00458 451 aaPredicted RBP10.4□□□□□ -0.74
PTCH1-225ENST00000551845 NTN3O00634 580 aaPredicted RBP10.4□□□□□ -0.74
PTCH1-225ENST00000551845 LIN7AO14910 233 aaPredicted RBP10.4□□□□□ -0.74
PTCH1-225ENST00000551845 BRAFP15056 766 aa10.4□□□□□ -0.74
PTCH1-225ENST00000551845 OGNP20774 298 aaKnown RBP10.4□□□□□ -0.74
PTCH1-225ENST00000551845 RPS3P23396 243 aaKnown RBP eCLIP10.4□□□□□ -0.74
PTCH1-225ENST00000551845 ELK3P41970 407 aa10.4□□□□□ -0.74
PTCH1-225ENST00000551845 ABCG1P45844 678 aa10.4□□□□□ -0.74
PTCH1-225ENST00000551845 CD151P48509 253 aa10.4□□□□□ -0.74
PTCH1-225ENST00000551845 PLTPP55058 493 aa10.4□□□□□ -0.74
PTCH1-225ENST00000551845 GPLD1P80108 840 aa10.4□□□□□ -0.74
PTCH1-225ENST00000551845 PDIA2Q13087 525 aaKnown RBP10.4□□□□□ -0.74
PTCH1-225ENST00000551845 SQSTM1Q13501 440 aa10.4□□□□□ -0.74
PTCH1-225ENST00000551845 KRT33BQ14525 404 aa10.4□□□□□ -0.74
PTCH1-225ENST00000551845 NR1D2Q14995 579 aa10.4□□□□□ -0.74
PTCH1-225ENST00000551845 RPE65Q16518 533 aa10.4□□□□□ -0.74
PTCH1-225ENST00000551845 MSS51Q4VC12 460 aa10.4□□□□□ -0.74
PTCH1-225ENST00000551845 GLE1Q53GS7 698 aaKnown RBP10.4□□□□□ -0.74
PTCH1-225ENST00000551845 SPANXN3Q5MJ09 141 aa10.4□□□□□ -0.74
PTCH1-225ENST00000551845 HP1BP3Q5SSJ5 553 aaPredicted RBP10.4□□□□□ -0.74
PTCH1-225ENST00000551845 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.4□□□□□ -0.74
PTCH1-225ENST00000551845 C8orf74Q6P047 294 aa10.4□□□□□ -0.74
PTCH1-225ENST00000551845 USP53Q70EK8 1073 aa10.4□□□□□ -0.74
PTCH1-225ENST00000551845 CENPUQ71F23 418 aa10.4□□□□□ -0.74
PTCH1-225ENST00000551845 ZNF438Q7Z4V0 828 aa10.4□□□□□ -0.74
PTCH1-225ENST00000551845 SPRED1Q7Z699 444 aa10.4□□□□□ -0.74
PTCH1-225ENST00000551845 ZNF605Q86T29 641 aa10.4□□□□□ -0.74
PTCH1-225ENST00000551845 PIM3Q86V86 326 aa10.4□□□□□ -0.74
PTCH1-225ENST00000551845 AGGF1Q8N302 714 aaeCLIP10.4□□□□□ -0.74
PTCH1-225ENST00000551845 DCBLD1Q8N8Z6 715 aa10.4□□□□□ -0.74
PTCH1-225ENST00000551845 OR10G6Q8NH81 332 aa10.4□□□□□ -0.74
PTCH1-225ENST00000551845 ZFPM2Q8WW38 1151 aa10.4□□□□□ -0.74
PTCH1-225ENST00000551845 ELMO1Q92556 727 aa10.4□□□□□ -0.74
PTCH1-225ENST00000551845 CCDC97Q96F63 343 aaPredicted RBP10.4□□□□□ -0.74
PTCH1-225ENST00000551845 PWWP2AQ96N64 755 aa10.4□□□□□ -0.74
PTCH1-225ENST00000551845 INSM2Q96T92 566 aaPredicted RBP10.4□□□□□ -0.74
PTCH1-225ENST00000551845 TRIM56Q9BRZ2 755 aaKnown RBP10.4□□□□□ -0.74
PTCH1-225ENST00000551845 WWP1Q9H0M0 922 aa10.4□□□□□ -0.74
PTCH1-225ENST00000551845 COG4Q9H9E3 785 aa10.4□□□□□ -0.74
PTCH1-225ENST00000551845 UCK1Q9HA47 277 aa10.4□□□□□ -0.74
PTCH1-225ENST00000551845 POT1Q9NUX5 634 aa10.4□□□□□ -0.74
PTCH1-225ENST00000551845 ZC3H7BQ9UGR2 993 aaKnown RBP10.4□□□□□ -0.74
PTCH1-225ENST00000551845 GNPTGQ9UJJ9 305 aa10.4□□□□□ -0.74
PTCH1-225ENST00000551845 IGSF10Q6WRI0 2623 aa10.39□□□□□ -0.75
PTCH1-225ENST00000551845 TMEM131Q92545 1883 aa10.39□□□□□ -0.75
PTCH1-225ENST00000551845 UBA6A0AVT1 1052 aaPredicted RBP10.39□□□□□ -0.75
PTCH1-225ENST00000551845 TRABD2BA6NFA1 517 aa10.39□□□□□ -0.75
PTCH1-225ENST00000551845 OR52A4PA6NMU1 304 aa10.39□□□□□ -0.75
PTCH1-225ENST00000551845 H3BMM5 538 aa10.39□□□□□ -0.75
PTCH1-225ENST00000551845 KPNA5O15131 536 aa10.39□□□□□ -0.75
PTCH1-225ENST00000551845 EIF3HO15372 352 aaKnown RBP eCLIP10.39□□□□□ -0.75
PTCH1-225ENST00000551845 CPNE6O95741 557 aa10.39□□□□□ -0.75
PTCH1-225ENST00000551845 APOA4P06727 396 aa10.39□□□□□ -0.75
PTCH1-225ENST00000551845 SLC35G4P0C7Q5 338 aa10.39□□□□□ -0.75
PTCH1-225ENST00000551845 PLA2G2AP14555 144 aa10.39□□□□□ -0.75
PTCH1-225ENST00000551845 AMD1P17707 334 aa10.39□□□□□ -0.75
PTCH1-225ENST00000551845 CHRM3P20309 590 aa10.39□□□□□ -0.75
PTCH1-225ENST00000551845 NDUFS1P28331 727 aa10.39□□□□□ -0.75
PTCH1-225ENST00000551845 CD1CP29017 333 aa10.39□□□□□ -0.75
PTCH1-225ENST00000551845 FMO4P31512 558 aa10.39□□□□□ -0.75
PTCH1-225ENST00000551845 EPHA4P54764 986 aa10.39□□□□□ -0.75
PTCH1-225ENST00000551845 ADARP55265 1226 aaKnown RBP10.39□□□□□ -0.75
PTCH1-225ENST00000551845 CLDN6P56747 220 aa10.39□□□□□ -0.75
PTCH1-225ENST00000551845 UBE2IP63279 158 aaKnown RBP10.39□□□□□ -0.75
PTCH1-225ENST00000551845 SLC7A5Q01650 507 aa10.39□□□□□ -0.75
PTCH1-225ENST00000551845 CBLBQ13191 982 aa10.39□□□□□ -0.75
PTCH1-225ENST00000551845 CTBP1Q13363 440 aa10.39□□□□□ -0.75
PTCH1-225ENST00000551845 BRD3Q15059 726 aa10.39□□□□□ -0.75
PTCH1-225ENST00000551845 ISXQ2M1V0 245 aa10.39□□□□□ -0.75
PTCH1-225ENST00000551845 TYSND1Q2T9J0 566 aa10.39□□□□□ -0.75
PTCH1-225ENST00000551845 HSP90AA5PQ58FG0 334 aa10.39□□□□□ -0.75
PTCH1-225ENST00000551845 CAPRIN2Q6IMN6 1127 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms