RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 ACRV1P26436 265 aa12.72□□□□□ -0.37
NPAS3-209ENST00000551008 HADHAP40939 763 aa12.72□□□□□ -0.37
NPAS3-209ENST00000551008 HALP42357 657 aa12.72□□□□□ -0.37
NPAS3-209ENST00000551008 SEPHS1P49903 392 aa12.72□□□□□ -0.37
NPAS3-209ENST00000551008 PDE1BQ01064 536 aa12.72□□□□□ -0.37
NPAS3-209ENST00000551008 SEMA5AQ13591 1074 aa12.72□□□□□ -0.37
NPAS3-209ENST00000551008 SNX1Q13596 522 aa12.72□□□□□ -0.37
NPAS3-209ENST00000551008 SEPT6Q14141 434 aa12.72□□□□□ -0.37
NPAS3-209ENST00000551008 GPR33Q49SQ1 333 aa12.72□□□□□ -0.37
NPAS3-209ENST00000551008 TAF1BQ53T94 588 aaPredicted RBP12.72□□□□□ -0.37
NPAS3-209ENST00000551008 SEL1L2Q5TEA6 688 aa12.72□□□□□ -0.37
NPAS3-209ENST00000551008 FAM92BQ6ZTR7 304 aa12.72□□□□□ -0.37
NPAS3-209ENST00000551008 LRRC8AQ8IWT6 810 aa12.72□□□□□ -0.37
NPAS3-209ENST00000551008 CACNA2D3Q8IZS8 1091 aa12.72□□□□□ -0.37
NPAS3-209ENST00000551008 CLDN19Q8N6F1 224 aa12.72□□□□□ -0.37
NPAS3-209ENST00000551008 CCDC112Q8NEF3 446 aa12.72□□□□□ -0.37
NPAS3-209ENST00000551008 HM13Q8TCT9 377 aa12.72□□□□□ -0.37
NPAS3-209ENST00000551008 STYXQ8WUJ0 223 aa12.72□□□□□ -0.37
NPAS3-209ENST00000551008 EXTL1Q92935 676 aa12.72□□□□□ -0.37
NPAS3-209ENST00000551008 ULK4Q96C45 1275 aa12.72□□□□□ -0.37
NPAS3-209ENST00000551008 C12orf66Q96MD2 445 aa12.72□□□□□ -0.37
NPAS3-209ENST00000551008 TEFMQ96QE5 360 aaKnown RBP12.72□□□□□ -0.37
NPAS3-209ENST00000551008 COPS8Q99627 209 aa12.72□□□□□ -0.37
NPAS3-209ENST00000551008 ASPSCR1Q9BZE9 553 aa12.72□□□□□ -0.37
NPAS3-209ENST00000551008 OR52A5Q9H2C5 316 aa12.72□□□□□ -0.37
NPAS3-209ENST00000551008 COG4Q9H9E3 785 aa12.72□□□□□ -0.37
NPAS3-209ENST00000551008 IMP3Q9NV31 184 aaKnown RBP12.72□□□□□ -0.37
NPAS3-209ENST00000551008 SLC24A2Q9UI40 661 aa12.72□□□□□ -0.37
NPAS3-209ENST00000551008 TENM4Q6N022 2769 aa12.72□□□□□ -0.37
NPAS3-209ENST00000551008 CCDC162PA2VCL2 907 aa12.71□□□□□ -0.37
NPAS3-209ENST00000551008 TERTO14746 1132 aaKnown RBP12.71□□□□□ -0.37
NPAS3-209ENST00000551008 TOX3O15405 576 aaPredicted RBP12.71□□□□□ -0.37
NPAS3-209ENST00000551008 KRT86O43790 486 aa12.71□□□□□ -0.37
NPAS3-209ENST00000551008 POLBP06746 335 aa12.71□□□□□ -0.37
NPAS3-209ENST00000551008 ATP1B2P14415 290 aaPredicted RBP12.71□□□□□ -0.37
NPAS3-209ENST00000551008 F8A1P23610 371 aa12.71□□□□□ -0.37
NPAS3-209ENST00000551008 PDHA2P29803 388 aa12.71□□□□□ -0.37
NPAS3-209ENST00000551008 ACVR1Q04771 509 aa12.71□□□□□ -0.37
NPAS3-209ENST00000551008 SEMA3AQ14563 771 aa12.71□□□□□ -0.37
NPAS3-209ENST00000551008 CACHD1Q5VU97 1274 aa12.71□□□□□ -0.37
NPAS3-209ENST00000551008 IRGCQ6NXR0 463 aa12.71□□□□□ -0.37
NPAS3-209ENST00000551008 CEACAM20Q6UY09 585 aa12.71□□□□□ -0.37
NPAS3-209ENST00000551008 ZNF534Q76KX8 674 aa12.71□□□□□ -0.37
NPAS3-209ENST00000551008 UNC5BQ8IZJ1 945 aa12.71□□□□□ -0.37
NPAS3-209ENST00000551008 SLC41A2Q96JW4 573 aa12.71□□□□□ -0.37
NPAS3-209ENST00000551008 MAP3K3Q99759 626 aa12.71□□□□□ -0.37
NPAS3-209ENST00000551008 FRMD8P1Q9BZ68 369 aaPredicted RBP12.71□□□□□ -0.37
NPAS3-209ENST00000551008 KIR3DX1Q9H7L2 352 aa12.71□□□□□ -0.37
NPAS3-209ENST00000551008 LZTFL1Q9NQ48 299 aa12.71□□□□□ -0.37
NPAS3-209ENST00000551008 CASS4Q9NQ75 786 aa12.71□□□□□ -0.37
NPAS3-209ENST00000551008 IL17BQ9UHF5 180 aa12.71□□□□□ -0.37
NPAS3-209ENST00000551008 ACSL5Q9ULC5 683 aa12.71□□□□□ -0.37
NPAS3-209ENST00000551008 PCDHB11Q9Y5F2 797 aa12.71□□□□□ -0.37
NPAS3-209ENST00000551008 MED13Q9UHV7 2174 aa12.7□□□□□ -0.38
NPAS3-209ENST00000551008 OR5K3A6NET4 321 aa12.7□□□□□ -0.38
NPAS3-209ENST00000551008 GOLGA6L3A6NEY3 463 aa12.7□□□□□ -0.38
NPAS3-209ENST00000551008 POLR1CO15160 346 aaPredicted RBP12.7□□□□□ -0.38
NPAS3-209ENST00000551008 PSMD3O43242 534 aa12.7□□□□□ -0.38
NPAS3-209ENST00000551008 IFNB1P01574 187 aa12.7□□□□□ -0.38
NPAS3-209ENST00000551008 PTMAP06454 111 aaKnown RBP12.7□□□□□ -0.38
NPAS3-209ENST00000551008 FOLR1P15328 257 aa12.7□□□□□ -0.38
NPAS3-209ENST00000551008 ITGB6P18564 788 aa12.7□□□□□ -0.38
NPAS3-209ENST00000551008 NELFEP18615 380 aaKnown RBP12.7□□□□□ -0.38
NPAS3-209ENST00000551008 STIP1P31948 543 aaKnown RBP12.7□□□□□ -0.38
NPAS3-209ENST00000551008 RPL22P35268 128 aaKnown RBP12.7□□□□□ -0.38
NPAS3-209ENST00000551008 PREPP48147 710 aa12.7□□□□□ -0.38
NPAS3-209ENST00000551008 ARCN1P48444 511 aaKnown RBP12.7□□□□□ -0.38
NPAS3-209ENST00000551008 ATP1A2P50993 1020 aa12.7□□□□□ -0.38
NPAS3-209ENST00000551008 KPNA2P52292 529 aaKnown RBP12.7□□□□□ -0.38
NPAS3-209ENST00000551008 CACNG1Q06432 222 aa12.7□□□□□ -0.38
NPAS3-209ENST00000551008 KCNAB1Q14722 419 aa12.7□□□□□ -0.38
NPAS3-209ENST00000551008 RPS6KA1Q15418 735 aa12.7□□□□□ -0.38
NPAS3-209ENST00000551008 TBR1Q16650 682 aa12.7□□□□□ -0.38
NPAS3-209ENST00000551008 ZRANB3Q5FWF4 1079 aa12.7□□□□□ -0.38
NPAS3-209ENST00000551008 FBXO38Q6PIJ6 1188 aa12.7□□□□□ -0.38
NPAS3-209ENST00000551008 CFAP206Q8IYR0 622 aa12.7□□□□□ -0.38
NPAS3-209ENST00000551008 NLGN4XQ8N0W4 816 aa12.7□□□□□ -0.38
NPAS3-209ENST00000551008 NLGN4YQ8NFZ3 816 aaPredicted RBP12.7□□□□□ -0.38
NPAS3-209ENST00000551008 OR6C1Q96RD1 312 aa12.7□□□□□ -0.38
NPAS3-209ENST00000551008 RAB6BQ9NRW1 208 aa12.7□□□□□ -0.38
NPAS3-209ENST00000551008 CCDC88CQ9P219 2028 aa12.7□□□□□ -0.38
NPAS3-209ENST00000551008 C17orf113A0A1B0GUU1 675 aa12.69□□□□□ -0.38
NPAS3-209ENST00000551008 KLHL33A6NCF5 533 aa12.69□□□□□ -0.38
NPAS3-209ENST00000551008 EIF4E1BA6NMX2 242 aaKnown RBP12.69□□□□□ -0.38
NPAS3-209ENST00000551008 ERI2A8K979 691 aaKnown RBP12.69□□□□□ -0.38
NPAS3-209ENST00000551008 RASSF9O75901 435 aa12.69□□□□□ -0.38
NPAS3-209ENST00000551008 ITGB2P05107 769 aa12.69□□□□□ -0.38
NPAS3-209ENST00000551008 CCDC175P0C221 793 aa12.69□□□□□ -0.38
NPAS3-209ENST00000551008 SLC35G4P0C7Q5 338 aa12.69□□□□□ -0.38
NPAS3-209ENST00000551008 FAM87AP0C7U9 286 aa12.69□□□□□ -0.38
NPAS3-209ENST00000551008 FGF5P12034 268 aa12.69□□□□□ -0.38
NPAS3-209ENST00000551008 PLA2G2AP14555 144 aa12.69□□□□□ -0.38
NPAS3-209ENST00000551008 MSNP26038 577 aaKnown RBP12.69□□□□□ -0.38
NPAS3-209ENST00000551008 FDFT1P37268 417 aa12.69□□□□□ -0.38
NPAS3-209ENST00000551008 STAT5AP42229 794 aa12.69□□□□□ -0.38
NPAS3-209ENST00000551008 FOXM1Q08050 763 aa12.69□□□□□ -0.38
NPAS3-209ENST00000551008 C19orf57Q0VDD7 668 aa12.69□□□□□ -0.38
NPAS3-209ENST00000551008 CDH17Q12864 832 aa12.69□□□□□ -0.38
NPAS3-209ENST00000551008 TSTD2Q5T7W7 516 aa12.69□□□□□ -0.38
NPAS3-209ENST00000551008 DRICH1Q6PGQ1 229 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms