RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 PRPF4O43172 522 aaKnown RBP eCLIP6.13□□□□□ -1.43
TGFBR1-208ENST00000550253 IDH1O75874 414 aaKnown RBP6.13□□□□□ -1.43
TGFBR1-208ENST00000550253 ZNF202O95125 648 aa6.13□□□□□ -1.43
TGFBR1-208ENST00000550253 PENKP01210 267 aaPredicted RBP6.13□□□□□ -1.43
TGFBR1-208ENST00000550253 UNGP13051 313 aaPredicted RBP6.13□□□□□ -1.43
TGFBR1-208ENST00000550253 STMN1P16949 149 aa6.13□□□□□ -1.43
TGFBR1-208ENST00000550253 TFEBP19484 476 aa6.13□□□□□ -1.43
TGFBR1-208ENST00000550253 BMP5P22003 454 aa6.13□□□□□ -1.43
TGFBR1-208ENST00000550253 PSMA3P25788 255 aa6.13□□□□□ -1.43
TGFBR1-208ENST00000550253 GPR143P51810 404 aa6.13□□□□□ -1.43
TGFBR1-208ENST00000550253 NAE1Q13564 534 aa6.13□□□□□ -1.43
TGFBR1-208ENST00000550253 C2orf68Q2NKX9 166 aa6.13□□□□□ -1.43
TGFBR1-208ENST00000550253 TYSND1Q2T9J0 566 aa6.13□□□□□ -1.43
TGFBR1-208ENST00000550253 FAM153CQ494X1 144 aa6.13□□□□□ -1.43
TGFBR1-208ENST00000550253 ISM2Q6H9L7 571 aa6.13□□□□□ -1.43
TGFBR1-208ENST00000550253 PLEKHA7Q6IQ23 1121 aa6.13□□□□□ -1.43
TGFBR1-208ENST00000550253 ALKBH5Q6P6C2 394 aaKnown RBP6.13□□□□□ -1.43
TGFBR1-208ENST00000550253 ZDHHC23Q8IYP9 409 aa6.13□□□□□ -1.43
TGFBR1-208ENST00000550253 TTC9BQ8N6N2 239 aa6.13□□□□□ -1.43
TGFBR1-208ENST00000550253 RBM15BQ8NDT2 890 aaKnown RBP6.13□□□□□ -1.43
TGFBR1-208ENST00000550253 BEST2Q8NFU1 509 aa6.13□□□□□ -1.43
TGFBR1-208ENST00000550253 ZNF398Q8TD17 642 aa6.13□□□□□ -1.43
TGFBR1-208ENST00000550253 DYNLL2Q96FJ2 89 aa6.13□□□□□ -1.43
TGFBR1-208ENST00000550253 RITA1Q96K30 269 aa6.13□□□□□ -1.43
TGFBR1-208ENST00000550253 EGLN2Q96KS0 407 aa6.13□□□□□ -1.43
TGFBR1-208ENST00000550253 CCDC114Q96M63 670 aa6.13□□□□□ -1.43
TGFBR1-208ENST00000550253 KRTAP4-6Q9BYQ5 205 aa6.13□□□□□ -1.43
TGFBR1-208ENST00000550253 CDT1Q9H211 546 aa6.13□□□□□ -1.43
TGFBR1-208ENST00000550253 MOV10Q9HCE1 1003 aaKnown RBP6.13□□□□□ -1.43
TGFBR1-208ENST00000550253 PARD6AQ9NPB6 346 aa6.13□□□□□ -1.43
TGFBR1-208ENST00000550253 GPR108Q9NPR9 543 aa6.13□□□□□ -1.43
TGFBR1-208ENST00000550253 DNAJB4Q9UDY4 337 aa6.13□□□□□ -1.43
TGFBR1-208ENST00000550253 IPO11Q9UI26 975 aaKnown RBP6.13□□□□□ -1.43
TGFBR1-208ENST00000550253 CLIC4Q9Y696 253 aa6.13□□□□□ -1.43
TGFBR1-208ENST00000550253 LCTP09848 1927 aa6.12□□□□□ -1.43
TGFBR1-208ENST00000550253 MYH7P12883 1935 aa6.12□□□□□ -1.43
TGFBR1-208ENST00000550253 ROBO3Q96MS0 1386 aa6.12□□□□□ -1.43
TGFBR1-208ENST00000550253 SYNRGQ9UMZ2 1314 aa6.12□□□□□ -1.43
TGFBR1-208ENST00000550253 ARHGEF37A1IGU5 675 aa6.12□□□□□ -1.43
TGFBR1-208ENST00000550253 C17orf102A2RUQ5 167 aa6.12□□□□□ -1.43
TGFBR1-208ENST00000550253 FOXO6A8MYZ6 492 aa6.12□□□□□ -1.43
TGFBR1-208ENST00000550253 INPPL1O15357 1258 aa6.12□□□□□ -1.43
TGFBR1-208ENST00000550253 STX6O43752 255 aa6.12□□□□□ -1.43
TGFBR1-208ENST00000550253 SIX3O95343 332 aaPredicted RBP6.12□□□□□ -1.43
TGFBR1-208ENST00000550253 TOP3BO95985 862 aaKnown RBP6.12□□□□□ -1.43
TGFBR1-208ENST00000550253 MMP2P08253 660 aa6.12□□□□□ -1.43
TGFBR1-208ENST00000550253 CHRM5P08912 532 aaPredicted RBP6.12□□□□□ -1.43
TGFBR1-208ENST00000550253 PRLRP16471 622 aa6.12□□□□□ -1.43
TGFBR1-208ENST00000550253 YPEL5P62699 121 aa6.12□□□□□ -1.43
TGFBR1-208ENST00000550253 PMPCAQ10713 525 aa6.12□□□□□ -1.43
TGFBR1-208ENST00000550253 WASHC5Q12768 1159 aa6.12□□□□□ -1.43
TGFBR1-208ENST00000550253 ZNF169Q14929 603 aaPredicted RBP6.12□□□□□ -1.43
TGFBR1-208ENST00000550253 PTPAQ15257 358 aa6.12□□□□□ -1.43
TGFBR1-208ENST00000550253 SNAPC1Q16533 368 aa6.12□□□□□ -1.43
TGFBR1-208ENST00000550253 KRTCAP3Q53RY4 240 aa6.12□□□□□ -1.43
TGFBR1-208ENST00000550253 CCDC158Q5M9N0 1113 aa6.12□□□□□ -1.43
TGFBR1-208ENST00000550253 Q6YL49 198 aa6.12□□□□□ -1.43
TGFBR1-208ENST00000550253 RNF207Q6ZRF8 634 aa6.12□□□□□ -1.43
TGFBR1-208ENST00000550253 LINGO2Q7L985 606 aa6.12□□□□□ -1.43
TGFBR1-208ENST00000550253 SDR42E1Q8WUS8 393 aa6.12□□□□□ -1.43
TGFBR1-208ENST00000550253 MOAP1Q96BY2 351 aa6.12□□□□□ -1.43
TGFBR1-208ENST00000550253 MGME1Q9BQP7 344 aa6.12□□□□□ -1.43
TGFBR1-208ENST00000550253 PIMREGQ9BSJ6 248 aa6.12□□□□□ -1.43
TGFBR1-208ENST00000550253 PPIL3Q9H2H8 161 aaKnown RBP6.12□□□□□ -1.43
TGFBR1-208ENST00000550253 MMADHCQ9H3L0 296 aaPredicted RBP6.12□□□□□ -1.43
TGFBR1-208ENST00000550253 ADPRHL2Q9NX46 363 aa6.12□□□□□ -1.43
TGFBR1-208ENST00000550253 DDX43Q9NXZ2 648 aaKnown RBP6.12□□□□□ -1.43
TGFBR1-208ENST00000550253 ADAM21Q9UKJ8 722 aa6.12□□□□□ -1.43
TGFBR1-208ENST00000550253 WNT6Q9Y6F9 365 aa6.12□□□□□ -1.43
TGFBR1-208ENST00000550253 PTPRSQ13332 1948 aa6.11□□□□□ -1.43
TGFBR1-208ENST00000550253 CCDC188H7C350 402 aa6.11□□□□□ -1.43
TGFBR1-208ENST00000550253 MPHOSPH10O00566 681 aaKnown RBP6.11□□□□□ -1.43
TGFBR1-208ENST00000550253 IPO8O15397 1037 aaKnown RBP6.11□□□□□ -1.43
TGFBR1-208ENST00000550253 SURF6O75683 361 aaKnown RBP6.11□□□□□ -1.43
TGFBR1-208ENST00000550253 SLC22A3O75751 556 aa6.11□□□□□ -1.43
TGFBR1-208ENST00000550253 FLOT1O75955 427 aa6.11□□□□□ -1.43
TGFBR1-208ENST00000550253 TRUB2O95900 331 aaKnown RBP6.11□□□□□ -1.43
TGFBR1-208ENST00000550253 THEGLP0DJG4 465 aa6.11□□□□□ -1.43
TGFBR1-208ENST00000550253 SLC16A2P36021 539 aa6.11□□□□□ -1.43
TGFBR1-208ENST00000550253 TUBB4BP68371 445 aa6.11□□□□□ -1.43
TGFBR1-208ENST00000550253 SCN1BQ07699 218 aa6.11□□□□□ -1.43
TGFBR1-208ENST00000550253 C6orf163Q5TEZ5 329 aa6.11□□□□□ -1.43
TGFBR1-208ENST00000550253 DHRS7BQ6IAN0 325 aaPredicted RBP6.11□□□□□ -1.43
TGFBR1-208ENST00000550253 LCNL1Q6ZST4 164 aa6.11□□□□□ -1.43
TGFBR1-208ENST00000550253 OTOAQ7RTW8 1153 aa6.11□□□□□ -1.43
TGFBR1-208ENST00000550253 ANKRD33Q7Z3H0 272 aa6.11□□□□□ -1.43
TGFBR1-208ENST00000550253 ADCK2Q7Z695 626 aa6.11□□□□□ -1.43
TGFBR1-208ENST00000550253 CCAR2Q8N163 923 aaKnown RBP6.11□□□□□ -1.43
TGFBR1-208ENST00000550253 SIX6OS1Q8N1H7 587 aa6.11□□□□□ -1.43
TGFBR1-208ENST00000550253 PARP16Q8N5Y8 322 aa6.11□□□□□ -1.43
TGFBR1-208ENST00000550253 IQUBQ8NA54 791 aa6.11□□□□□ -1.43
TGFBR1-208ENST00000550253 SPC24Q8NBT2 197 aa6.11□□□□□ -1.43
TGFBR1-208ENST00000550253 CORO2AQ92828 525 aa6.11□□□□□ -1.43
TGFBR1-208ENST00000550253 FRAT1Q92837 279 aaPredicted RBP6.11□□□□□ -1.43
TGFBR1-208ENST00000550253 HARBI1Q96MB7 349 aa6.11□□□□□ -1.43
TGFBR1-208ENST00000550253 CCDC43Q96MW1 224 aaKnown RBP6.11□□□□□ -1.43
TGFBR1-208ENST00000550253 ACOX2Q99424 681 aa6.11□□□□□ -1.43
TGFBR1-208ENST00000550253 PI4K2AQ9BTU6 479 aa6.11□□□□□ -1.43
TGFBR1-208ENST00000550253 SCNM1Q9BWG6 230 aa6.11□□□□□ -1.43
TGFBR1-208ENST00000550253 RTN4RQ9BZR6 473 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms